Onychostoma macrolepis: 131542047
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Entry
131542047 CDS
T09350
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131542047 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
omc03029
]
131542047 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
omc04031
]
131542047 (rhot1b)
Mitochondrial biogenesis [BR:
omc03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
131542047 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
131542047 (rhot1b)
GTP-binding proteins [BR:
omc04031
]
Small (monomeric) G-proteins
Rho Family
Miro
131542047 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_7
Arf
EF-hand_6
EF-hand_1
RsgA_GTPase
MMR_HSR1
PduV-EutP
AAA_22
AAA
AAA_24
AAA_5
FeoB_N
Pox_A32
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
131542047
NCBI-ProteinID:
XP_058634298
LinkDB
All DBs
Position
06:14011251..14028062
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMTLVSEEFPAVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINERTDKDSRVPLILVGNKS
DLVEHSSMETVLPIMNKYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKE
MRSACVRALTRIFKVSDLDNDGILNDHELTFFQRTCFNTPLAPQALEDVKNVVRKNLTDG
VRDNGLTLKGFLFLHTLFIQRGRHETTWAVLRRFGYDDDLELHQDYLFPLLKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDSALSPEELMDLFDVFPYVPWGLDVNSTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIAEQESQASAITVTRDKKLDLQKKQTQRNVFR
CHVFGITGSGKTSFLQGFLGRNLVRQKAIKEEHKSYYAISTAHVYGQEKYLLLHEIFPDF
DFLSETELSCDIVCLIYDVSNPCSFEYCARIFKQYFMDSKTPCMLIAAKSDLPETKQQYC
MTPLEFCRKHKMPPPQSYTCNTAAAPSKDIFIKLTIMAVYPHARLRCMCTCNRCTFCLCQ
NFLNSELVQTVRTKLYTVIFSRHITHADLKSSTFWLRASVGATVCAMLGFAMYRALLRSR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagacgtgaggattctgttggttggagaacccaaagtggggaagacatctctg
atcatgacacttgtcagtgaggagttcccagctgtggttccttacagagctgaggagatc
actataccagcagatgtcacaccagagagagtccccactcatatagtggactactcagaa
gctgaacagacagatgaacagctttatcaagagatatcaaaggccaatgttatatgtata
gtctactcagtgaacaacaagaagtctattgagaaggtgacaagtcattggattcctttg
ataaatgagagaacagacaaagacagcagggttcctctgatccttgtggggaataaatct
gatctggttgagcacagcagtatggagactgtccttcccatcatgaacaaatacacagag
atagagacctgtgtggagtgttcagcaaagaatctgaagaatatttcggagttattttac
tatgcacagaaggctgtccttcaccctacagggccactctactgtccagagaagaaagag
atgaggtctgcctgtgttcgagctttgacacgtatctttaaggtttcagatttggacaat
gatggcattctcaatgatcatgagctcaccttttttcagagaacttgtttcaacacccca
ctagccccacaggccctggaggatgtaaaaaatgtagtgagaaaaaacctgacagatggt
gtgcgtgataatgggctcacactcaaaggtttcctcttcctacatactctcttcatccaa
agaggaaggcatgagacaacgtgggctgtactgcggaggtttggatatgatgacgatctt
gagctgcatcaggactacctgtttcccctgttaaaaataccaccagactgcaccacagag
ctcaatcacaatgcttacctgttcctacagagtgtctttgacaaacatgataaggacaga
gacagcgcattgtcccctgaagagcttatggatctatttgatgttttcccctatgtcccc
tggggactggatgtgaacagtacggtttgcactaatgaccagggctggatcacataccaa
ggctatctttctcagtggacgttaacgacttacctggatgtccagcgatgtctggaatat
cttggttacctcggttactctatcattgctgagcaggaatctcaggcatctgccataaca
gtgacccgtgacaagaagctcgaccttcagaagaaacagacgcaacggaatgtatttcgc
tgtcatgtctttggaataactggaagtggcaaaactagtttcctgcagggcttccttggc
agaaaccttgtgcgtcagaaggccataaaagaagaacacaagtcgtattatgcaatcagc
actgcacatgtgtacggacaggagaagtacttgttgctccatgaaatctttccagatttt
gatttcctgtctgagactgaactatcatgtgacattgtgtgtctgatctatgatgtcagc
aacccttgctcttttgagtactgcgcacgaatcttcaagcaatacttcatggatagtaag
actccatgtatgttgattgctgcaaagtcagacctgccagaaacaaagcagcaatactgt
atgactccactggagttctgtcgcaagcacaagatgccgccgcctcagtcctatacctgt
aacacagctgcggctcccagcaaagacatcttcatcaaactcaccatcatggctgtgtac
ccccatgcgcgtctgcgctgcatgtgtacctgtaacaggtgtaccttctgtctgtgtcag
aacttcctgaactctgagctcgtgcagacggttcggaccaaactctacactgtcatcttt
agcaggcatattacccatgctgacctgaagagctctacgttttggctcagagcgagtgtt
ggagccacagtttgtgctatgcttggctttgccatgtacagagccctcctcagatctcga
tga
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