Onychostoma macrolepis: 131542081
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Entry
131542081 CDS
T09350
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131542081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131542081
03036 Chromosome and associated proteins [BR:
omc03036
]
131542081
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131542081
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131542081
Chromatin remodeling factors
BAF complex
131542081
PBAF complex
131542081
GBAF(ncBAF) complex
131542081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
131542081
NCBI-ProteinID:
XP_058634368
LinkDB
All DBs
Position
06:112282..147987
Genome browser
AA seq
1633 aa
AA seq
DB search
MSTPEPVLGGTPCPGPSPGPGPSPGAVLGSGLSPGSSHSMMGPSPGPATSTGLSFPPQAS
AGYSQESLHQMHKPVEENLSEDARFSQMKVVPMRAGHSGMTRPGSPMDQHSQGYPSPLGS
SEHVSSPVSASGPPSGPLLSTSGSSSASLDGVDGQTLPQQNRPGSQSVAPGSSSSSSAPT
PFNQSQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPMPGMPQGPSLTSLPPGGGSTG
FSRGHGMVGPNMPPPGPSGVPAGVQGQNHNGPPKPWPEGPLVNAATPSNAPQKLMPPQPT
GRPSPAPPSVPPAASPVMPPQTQSPGHLAHPSQPTTMVPLHQKQNRITPVQKPCGLDPVE
ILQEREYRLEARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMR
RDTALETSLDAKAYKRNKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKD
FKEYHRSITAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKRKKKKLENAEGQTGALGPDGE
PLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEE
DEEEEEEPPQLLPSQTPTEDKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGSAVFARG
LQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQ
LRSGKFNVLITTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRV
LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRR
LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK
GKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGIVQGPDLYRASGKFEVLDR
ILPKLRASNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPAS
QYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV
NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEAQCHGEFTK
NPLLKDEAELDLTAAASQTEEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPK
RKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAI
EDGTLEEIEEEVRHKKTARKRRRDRDPDAIPSTSGARGGRERDDDGKRQKKRGRPPSEKL
SPNPPSLTKKMKKIVDAVIKYKENNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKE
RIRSHRYRSLNDLERDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEREEESDG
EESEEDEEDEGSDSETRSVKVKIKLSRKDRSAERGRGRRRTARTRAKPVVSDDDTDEEQE
EDRSNSASEEEQG
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggagcccgtgttaggaggcacgccctgtccggggccttctcctggtccg
ggcccgtctcccggagccgtgctggggtccggactgtcccctggatcctcacacagcatg
atgggccccagtcccggaccagccacttccacaggactctcctttcctccgcaagcgtct
gcgggatacagccaggagagcttgcaccagatgcacaagccggtggaggagaacctttca
gaagacgctcgcttcagtcagatgaaggtggttccgatgagggccggtcacagcgggatg
acccgtccagggagcccgatggaccagcactcgcaagggtacccgtctccgctgggctct
tcagagcacgtgtccagtcccgtgtccgccagcggtcctccgtccggccctctcctgtcc
acctctggctccagctctgcctcgctggacggtgtggacggccagaccctcccgcagcag
aaccgtccggggagccaaagcgtggccccgggctccagcagcagctcctccgctccgacg
cccttcaaccagagccagctgcaccagctgcgggcgcagatcatggcctataagatgctg
gctcgtggccagccgctcccagaacatctgcagatggcggtgcagggcaagcggcccatg
ccggggatgccccagggcccgtccctgaccagcctgccgcccggcggtgggagcaccggc
ttcagccgaggacatgggatggtgggacccaacatgcctcctcctggaccttctggagtc
ccggctggtgttcagggccagaaccacaacgggcccccgaaaccgtggcctgaaggtcct
ctggtcaatgcggcgaccccgtccaacgctcctcagaagctgatgccgccgcagcccacc
ggacgtccctctcccgcgccgccgtctgtgccaccggccgcgtctccggtcatgccgccg
cagacccagtctccaggacacctggcccacccgtctcagcccaccaccatggtgccgctg
caccagaagcagaaccgcatcacgccggttcagaagccctgcggtctggacccggtggag
atcctgcaggagagagagtacaggctggaagctcgtatcgctcaccgcattcaggagctg
gagaatcttcccgggtctctggccggagatctgcgcaccaaagccacgattgagctcaaa
gcgctccgactgctcaacttccagagacagctgcgtcaggaggtggtggtttgcatgaga
cgtgacacggccttagaaacctcactggacgcaaaggcctacaagcgcaacaagagacag
tccttacgtgaggcacgaatcacagagaaactagagaaacagcagaagatcgaacaggaa
cgcaaacgcagacagaaacaccaggaatatctcaacagcatcctgcagcacgccaaagac
ttcaaggagtaccatcggtccatcactgcaaagatccagaaactgaccaaagctgtggcc
acataccacgccaacactgagcgcgagcagaagaaagagaacgagcgcatcgagaaggag
cgaatgagacgcctgatggctgaggatgaggagggctaccggaagctcattgatcagaag
aaggacaagcgtctggcgtatctgctgcagcagacggatgagtacgtggctaatctgacg
gagctggtccgcgctcataaagctgtgcaggccctgaaggagaagaagaagaagaagagg
aagaagaagaagctggagaacgcggagggccagacaggggctctggggcccgatggagag
cccctggatgagacgagccagatgagtgatcttccagtgaaggtgatccacgtggacagt
gggaagattctgaccggagtggacgctcctaaagccggacagctggacacgtggctggag
atgaaccctggttacgaggtcgctccgcggtcagacagcgaggattctgggtcggaggag
gacgaggaagaggaagaggagcctcctcagctgctgccttcacaaactcccacagaagac
aagaagaagattcccgacccggacagtgaggacgtgtcagaagtggacgcccgtcacatt
atagagcatgccaaacaggacgtggacgatgagtacggtagcgctgtgtttgctcgtggg
ttacagtcgtattacgccgtggctcatgcggtcactgagagggtggataaacagtcgtct
ttgctaatcaatggtcaactcaagcaataccagatcaagggtctggagtggctggtgtct
ctctataacaacaatctgaacgggatcctggcggatgagatgggtttgggcaaaaccatc
caaaccatcgcgctcatcacgtacctgatggagtacaagcgtctgaacggaccctacctc
atcatcgtgccgctctcgactctgtctaactgggtctacgagtttgataaatgggcgccg
tctgtcgtcaaagtctcgtataaggggtctcctgctgctagaagagccttcgtccctcag
ctgcgcagcggcaagttcaacgtgctgatcaccacgtacgaatacatcatcaaagacaag
catgtgctggccaagattcgctggaagtacatgatcgtggacgaaggccatcgcatgaag
aaccatcactgtaagctgacgcaggtgttgaacacacattacctggcgccgcggcgcgtg
ctgctgaccgggacgccgctgcagaacaagctgcccgagctctgggcgctgctcaacttc
ctgctgcccaccatcttcaagagctgcagcacgtttgagcagtggttcaacgcacccttc
gccatgaccggagagaaggtggatctgaatgaggaggagaccatcctgatcatccgccgc
ctgcacaaggtgctccgccccttcctgttgcgcaggctgaagaaggaagtggaggcgcag
ctgcctgagaaggtggagtacgtgatcaagtgtgacatgtctgcgcttcagagggtcctg
taccgacacatgcaggccaaaggagtgctgctgaccgacggctccgagaaggacaagaag
ggtaaaggcggcactaagactctgatgaacaccatcatgcagctgaggaagatctgcaat
cacccctacatgttccagcagatcgaggagtcgttttctgagcatctgggtttcacggga
gggatcgttcaggggcctgatttataccgcgcctcgggaaagtttgaggtgctggatcgt
attttgcccaaattgcgagcgtccaatcacaaagtgctgctcttctgccaaatgacgtct
ttgatgaccataatggaggattatttcgcttaccgcaactttaaatacctgcgtctggac
ggcacgactaaagcagaggatcgtgggatgctgctgaagaccttcaatgatccggcctct
cagtacttcatattcctgctgagcaccagagcgggtggactgggcctcaatctgcagagc
gccgacaccgtcatcatatttgacagcgactggaaccctcatcaggacctccaggcgcag
gatcgagctcaccgcatcggtcagcagaacgaggtgcgggttctgcggctgtgtaccgtc
aacagcgtcgaggagaagatcctggcagccgctaaatacaagctgaatgtggaccagaag
gtgatccaggccggcatgttcgaccagaagtcgtcgagtcatgagcgccgagcgtttctg
caggccattctggagcacgaggagcaggacgaggcacagtgtcatggagagttcacaaag
aatcctttgttgaaagatgaagcagaactagatctgactgcagctgcatcacaaaccgaa
gaggacgaggtgccggatgatgagaccgtaaatcagatgatcgccagaagtgaagacgag
tttgaccagttcatgcgcatggatttggatcgccgccgcgaggaagctcgcaatccgaag
cgaaagcctcgtctcatggaggaggacgaactgcccacgtggatcatgaaagacgacgcc
gaggtggaaagactcacctgtgaggaagaagaggagaagatgttcggccgcggctctcgt
cagaggaaggaggtggattacagcgactcgctcacagagaaacagtggctaaaggcgatt
gaggacgggaccctggaggagatcgaggaggaggtgcgacacaagaaaacggctcggaag
aggaggcgcgatcgggatccggacgccatcccgtccacttcgggcgctcgcgggggacga
gagagagacgacgacggcaaaagacagaagaagcgaggtcgcccgccgtccgagaagctt
tcaccaaaccctccgtcgctcaccaagaagatgaagaagattgtggacgctgttattaaa
tataaggagaataacggccgtcagctgagcgaggtgttcatccagctgccgtcacgcaag
gagctgcccgagtactacgagctgatccgcaaacctgtggacttcaggaagatcaaggag
cgcatccggagccatcgataccgcagcctcaacgatctggagcgagacgtgatgctgctg
tgccagaacgctcagaccttcaacctggagggatcactgatctatgaggactctatcgtg
ctgcagtcagtgttcaccagcctgcgtcagaagatcgagagagaggaggagagtgatgga
gaggagagtgaggaagatgaagaggacgaaggctctgattcagagactcgatccgtgaag
gtgaagattaaactgagccgtaaggacagaagcgcagagcgcggcagaggacgcaggaga
actgcgagaacgcgagcgaaacctgtcgttagcgacgatgacacagatgaggagcaggag
gaggatcgatccaacagcgccagtgaggaagagcagggatga
DBGET
integrated database retrieval system
