Onychostoma macrolepis: 131542164
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Entry
131542164 CDS
T09350
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131542164 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131542164 (prpf38a)
Spliceosome [BR:
omc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131542164 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
131542164 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
131542164
NCBI-ProteinID:
XP_058634540
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All DBs
Position
06:complement(20235108..20239715)
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AA seq
313 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDIILPRLQKRQVLEEAELLDAR
ISALEEDLDEVETSDEEDEEEEKPERVQTPETHRRSYRDIDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaatagaacggtaaaagatgccaatagtatacatggaacaaatcctcagtatctt
gtcgaaaagattatacgaacacgtatttatgagtccaagtactggaaagaggaatgtttt
ggacttacagctgaacttgtggtggacaaagcaatggaactgaagtttgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgaccctaaagatgctgcagatc
cagcctgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtatgtccga
ttgcttggagcgatgtatatgcgcctgaccggaacttctgtggattgctacaagtattta
gaaccattatacaatgactacagaaaaattaaaagccagaacagaaatggagagtttgag
ttgatgcatgttgacgagtttatagatgagctgcttcatgcagagcgagtgtgtgacatc
atcctccctagacttcagaagagacaggttttggaggaagctgagctgcttgatgctcgc
attagtgctctggaagaagatctggatgaggtggaaaccagtgatgaggaggatgaggaa
gaagagaagccagagagagtgcagacaccagagacacacagaagaagttatagagacatt
gaccggccacgcaggtctccttctccacgctacaggcgcagccgctcacccagaagacgg
agcaggtctcctaaaagacgaagtccatcacccagacgtgatcgagatcgggaccgtcat
cgcagcaaaagtccccgcaggcaccgcagcagatccagggacagaaggcatcgctccaaa
tctccaggtcaccacagaagtcaccggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaagagaagtcgaagaggaaacgagtga
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