Onychostoma macrolepis: 131542334
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Entry
131542334 CDS
T09350
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omc01002
]
131542334 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131542334 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omc04147
]
131542334 (usp13)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131542334 (usp13)
Peptidases and inhibitors [BR:
omc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131542334 (usp13)
Ubiquitin system [BR:
omc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131542334 (usp13)
Exosome [BR:
omc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131542334 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UBA_9
UBA_DHX29
UBA_4
Motif
Other DBs
NCBI-GeneID:
131542334
NCBI-ProteinID:
XP_058634907
LinkDB
All DBs
Position
06:17776964..17809799
Genome browser
AA seq
862 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAILNALSPYKKQESDSWEEEIQVSRHARSLRQQE
NEVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETNFPLAVK
LDTITPDGADIYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRVSDWE
VIQEAGLKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKQLQRGISPKMFKALVSKGHP
EFSSNRQQDAHEFLLHLINQVERNSSGSENPSDVFRFLVEERVQCCQTQKVRYTQRVDYL
MQLPVPLEAASNREELIAYESKRKEAEENMRPPPEPVRARIPFTACLQAFTEPENVPDFW
SSALQAKSAGVKTSRFASFPEYMVMQIKKFTFGVDWVPKKLDVSVDVPDFLDLNRLRATG
LQSGEEELPDLTPPIVIPEDTRDNTTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAVPTYMESDLLSPSLPTTSALDNQPPEESISILTS
MGFPRHHTIQALKATNNNLERALDWIFTHPDCEDESEAMSDTADMADTEPNNNSFSNANA
HSDSTLSPDQDLSSPRVRDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWLIYNDHKV
CLSERPPKDLGYMYFYRRLSSC
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatctgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgaatgcgctttttcctacgactctcctgaatcggaa
ggaggtctgtatgtgtgtatgaactcattcctgggtttcggaagagaacatgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaaacgacatgtgaaagagaaa
gccacaggtgctgcagggggtgccataccaagaagaaggaacggaaaagtatttttagat
ttagagcttaaccgtgattttaacggagatgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtgacaatagcctgtgacgccatcctcaatgctctatctccatacaaaaagcaggaatct
gattcatgggaagaggagatccaagtatctagacatgccagaagtctcagacagcaggag
aacgaggttcgaattcctcccagcggctggaagtgcgccaagtgtgaaatgagagagaac
ctgtggctaaacctgacggatggctctgtcctctgtgggaagtggttctttgatgggagt
ggagggaacggacatgcccttgagcactacaaagaaaccaacttccccctggcagttaaa
ctcgacacaatcaccccagatggagcagatatttattcttttgatgaagaagaagcagtg
cttgatcctcacatatcagaacatttgttacactttggaatagatatgctgcaaatgcaa
aggacagagaatggccatcatacagacaaccacgtccagccgcgtgtgagtgactgggaa
gtgattcaggaggcgggtctaaaactaaagcctgtctatggctcaggatatacgggcatc
aaaaacctgggcaacagctgttacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttgggaaccttcagagaatatttgactactcaccccttgat
ccaactcaggatttcaacacacaaatggcgaaactcggtcatggacttctctcaggccag
tactcaaaacctccaatgaaatcagaacttattgaacaggtgatgaaagaagaatacaag
cagctgcaaagagggatttcacctaagatgttcaaagcgctggtcagtaaaggacaccca
gagttctcctcaaaccggcaacaagatgctcacgaattcttgctgcacttaattaaccag
gtggagaggaacagttcaggctcagagaaccccagcgatgtgttccgcttcttagttgag
gagcgagtgcagtgctgtcagacacagaaggtgcgctacacacagcgagtggactacctt
atgcagcttcctgtacccttggaggctgccagcaacagagaggagttaatagcatatgag
agtaagcggaaagaagccgaggagaacatgcggccccctccagagccggtgagagcccga
atccccttcactgcctgtctgcaagccttcactgagcctgagaatgttccagacttctgg
agctctgcattgcaagccaagtcggccggagtgaagacttctcgcttcgcatctttccca
gagtacatggtcatgcaaataaagaagttcacatttggggttgattgggtgcccaaaaag
ttagatgtttctgtagatgtacctgatttcctggacttgaatcgcctccgggccacaggg
ctacagtctggagaagaggagctgcctgaccttacacctcccattgtcattcctgaagac
accagagacaatacaacaaacaactctttggaatctccagaaatagatgaatcatccgtg
atgcagctggcagagatgggtttccctctggaagcctgtcggaaggcagtgtactacact
gggaatatgggggcagagatggcctttaactggataatagcacacatggaagagccagat
tttgccgagcctctggcagttcccacttacatggaatcagacctgctcagccccagcctc
cctacaaccagtgcactggacaaccagcctccagaagagagcatctccatcctcacctcc
atgggcttccccagacatcacacaatccaggctctcaaagccacaaacaacaacttggag
cgtgcgcttgactggatattcacacacccagactgtgaggacgagagtgaggctatgtca
gacacggcagacatggcagacacggagccgaacaataacagcttctcaaacgccaatgcc
cacagtgactccacgctgtctccagatcaggacctgtccagcccccgcgtcagagacgga
cccgggcgttacgaactgtttgccttcatcagtcacatgggagcatccacaatgtctggt
cattatgtgtgtcatatcaaaaaagagggcagatggctgatttacaacgaccacaaagta
tgtttgtcagagaggccccctaaagatttgggctacatgtacttttaccggcgcctgtca
agctgctag
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