Onychostoma macrolepis: 131542413
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Entry
131542413 CDS
T09350
Symbol
ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131542413 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
131542413 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131542413 (ercc3)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131542413 (ercc3)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131542413 (ercc3)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131542413 (ercc3)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131542413 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
131542413
NCBI-ProteinID:
XP_058635072
LinkDB
All DBs
Position
06:complement(7409152..7422301)
Genome browser
AA seq
782 aa
AA seq
DB search
MGKKDKSDRDKKSKKRYYDEEEDDEEVTGSESQEAIPAAAGKQVEESSTKLDEYGAKDYR
QQMLLKNDHNSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAISEPVCRPTHAHEYKLTAYS
LYAAVSVGLQTSDIIEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESAFP
DVIQRLLQDTVIRDCRLRSAEGEETELITETISSKSAISKSQQDNGGPSTSQPADGQRTG
NQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRNDT
VNPDINMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW
EAERVMEWMKSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILFYTMNPNKF
RACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMFSSREEQQQLLQKVLAASD
LDAEEEVVMGDVGGKPQFSRRTGTMSSMSGADDTVYMEYQTSRSGKSLAGKNVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagataagagtgatcgagataaaaagtccaagaaacgttattatgatgag
gaagaggatgatgaagaggtgacgggcagtgaatctcaggaggccattccagcagctgct
gggaagcaggtggaggaatccagcactaaactggatgagtatggagccaaagactacaga
caacagatgcttctcaagaatgaccacaattcccggcccctatgggtggctcctgatggt
cacatcttcctagaggctttctctcccgtgtataaatacgctcaggacttcctggtggcc
atatcagagccggtgtgcagacctacccatgcgcacgagtacaagctgacggcttattct
ctatacgctgctgtgagcgtcggcctgcagacatctgatatcatagagtacctgcagaaa
ctcagcaagacctctgtgccagacggcattgtgcagtttattaagttgtgcacagtgagc
tacggtaaagtcaaactggtcctgaaacacaacaggtactttgtggagagtgcgttccct
gatgtcattcagaggctcttacaggacacagtgattcgggactgtcgtcttcggtctgct
gagggtgaggagactgagctcatcactgagaccatctctagcaaatctgcaatctcaaag
tctcagcaggacaatggcggtccatccacctcccagcctgcagacgggcagcgcacagga
aatcaggtgccggaggacatcttcagttactatgagcagatggataaagaggaggaggag
gaggaagagacacaaacagtgtcatttgagatccgtcaggaaatgatagaggagcttcag
aaacgttgcattcagttggaatatcctctcctggctgaatatgatttccgtaacgacact
gtgaacccagacatcaacatggacctgaagcccactgctgtgctgagaccatatcaggaa
aagagtctaaggaagatgtttgggaatggcagagctcgatctggagtcatcgtcctgcct
tgtggtgctggaaagtcactggtgggtgtcactgctgcctgcacagtgcgtaaacgctgt
ctggtgttgggaaactcctctgtgtcagtggaacagtggaaggctcagtttaagatgtgg
tccaccattgatgactcccagatctgccgtttcacttcagatgcaaaagacaaacccatc
ggctgctcggtggccattagtacttattctatgctgggccacaccaccaaacgctcatgg
gaggctgagagggtcatggagtggatgaaaagtcaggagtgggggctcattatactagat
gaggtgcacacaatcccagcaaagatgttccgtcgtgttctgacaatagtccaggctcac
tgtaaactgggtctcactgccacattagtgagagaggatgataagattgtcgatctaaac
tttctgattgggccgaagctctacgaggcgaactggatggaactacaaaacaatggttac
attgctaaagtccagtgtgctgaggtatggtgtcccatgtctcccgagttttatcgtgaa
tatgtggccataaagacaaagaagagaattctgttctacaccatgaatcccaacaagttc
cgtgcatgtcagttcctgatccgcttccacgagcggagaaacgacaagatcatcgtcttt
gccgacaacgtcttcgctctgaaagaatatgccatccgcctgaacaaaccgtatatttat
ggacccacatctcaaggagaacgtatgcagatccttcagaactttaaacacaatcccaaa
atcaataccatcttcatctccaaggtaggagatacttcatttgacctgccagaggcaaac
gtgctgatccagatctcctctcacggcggttctcgtcgtcaggaagctcagagactgggc
agagtgctgcgagccaagaaaggtatggttgcggaagaatacaatgcttacttttactcg
ctcgtctctcaggacacgcaggaaatggcttattccaccaagagacagcgcttcctggtg
gaccagggatacagtttcaaggtgatcacaaaattggctgggatggaggaggaagacttg
atgttttcctctcgtgaggaacagcagcagctcttgcagaaagttttggcagcatcagat
cttgacgcagaggaggaagtggtgatgggagacgtgggagggaagccacagttttctcgc
cgaacgggaactatgagctccatgtctggtgcagacgataccgtctacatggaataccag
acatcccgcagtggcaagtctttagccggcaagaatgtccatcctctgtttaaacgcttc
cgcaagtga
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integrated database retrieval system
