Onychostoma macrolepis: 131542922
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Entry
131542922 CDS
T09350
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omc01009
]
131542922 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131542922 (stau1)
Protein phosphatases and associated proteins [BR:
omc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131542922 (stau1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
131542922 (stau1)
mRNA cycle factors
Stress granule specific factors
131542922 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
131542922
NCBI-ProteinID:
XP_058636001
LinkDB
All DBs
Position
06:26770137..26783557
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AA seq
702 aa
AA seq
DB search
MSQLQFQVPGNPAPSAAPLQLAPPQPGFSIPCAAAPLPSESASHPLRNSALPSASATPFC
NPTVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWDAE
GTSIKKAQHSAATCALAQTTLPKPSHRSPRHPGKNPGGIYKGSEYNVTHTVELNALCMKL
GKKPIYKPIDAYQGMRPAFNYNIRAPGPYARSMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPIMQQLAEMNEEPVQENLNKSEISQVFEIALKRNMP
VNFEVLKETGPPHMKSFVVRVTVGEFSGEGEGKSKKIAKKLAAIAVLEELRKLPQLPVTD
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYTLVTERGLPRRREF
VMQVSVAGQNAEGMGPSKKVAKRNAAEKMLELLGFKVPQPQPPKPALKTDEKAPAKKPGD
GRKVTFFEPGSVEKAGLAINKEEDFRVPFLSHQQLPAGILPMVPEVAQAVGANQGLHAKD
YGRTAAPNPAMATVTAIIANELLYAGTSPTAEGILKTNNSLAQRPHGPLTRPSEQLGYLA
IIQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELD
QQSNERTANGPMTGCNKQDLEGDALLKPANSSTIGKTLDGTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccaggtgcctggcaaccctgcacccagtgccgcccctttacag
ctggccccaccccaacccggattcagcattccctgcgccgctgctcctttaccctcagag
agtgccagtcacccgctccgaaactccgccctgccttccgcctctgccacacccttctgc
aaccccacagtatctaacatggcaaaccctaaagagaagacccctatgtgtttggtaaat
gagttagcccgttacaataagatccaacctgaatacaagctactcagtgaacaaggacca
gcccactccaagatattctcagtgcggttaactctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcaacatgtgctctcgcccaaaccact
ctccccaaacccagtcacagaagcccccgccacccaggcaagaacccaggtgggatctac
aagggctcagagtataatgtaacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctacaaacctatagatgcctaccaggggatgagaccagcattcaac
tacaacatcagagcaccaggcccttatgcacgctccatgcagcattattactacccattt
cctcctgtggggccagtactgtatcatatggagctgtctatcggtggacaacagttccat
ggcaagggccgcacgcgtcaagcagccaaacatgacgctgcggctaaagctatcaaatat
ctgcagaaagagccaataatgcagcaactagctgagatgaacgaagagccagttcaagaa
aaccttaacaaatcagagatcagccaagtgtttgagattgcactgaagcgcaacatgcct
gtgaatttcgaggtgctaaaagagactgggcctccccacatgaagagttttgtggtgagg
gtaactgtgggcgagttttcaggggagggtgaaggcaaaagcaagaagatcgccaagaaa
ctagctgccatcgctgtcctggaggagctccgcaaactgcctcaactacctgtcaccgac
aagataccactacgtattaaaaagaaaagcaagtctattattaagctgcagaccagccct
gagtacggtcagggcatgaaccccatcagcagactggctcagatccagcaggctaagaaa
gaaaaagagcctgagtacactttagtgacggagagaggactgcctcgacgcagggagttt
gttatgcaggtgtcagttgcaggtcagaatgcagagggaatgggacctagtaaaaaagtg
gccaagcgaaatgcagccgagaagatgctggagcttctgggcttcaaagtgcctcagcca
caaccacccaaaccggcactgaaaacggacgagaaggcacctgctaagaaacctggagat
ggacgtaaagtgaccttctttgagccgggctctgtggagaaggctggtcttgcaatcaat
aaggaggaggatttccgagttcccttcctcagccatcagcagcttcctgctggcatttta
cccatggtgcctgaggtggcacaggcagtgggtgccaaccagggactccatgccaaagac
tacggtcgcacagctgcccccaacccagccatggccacagtaacggccataatagccaat
gagctgctgtacgctgggacttccccgaccgcagagggtatactgaagaccaacaacagc
ttggcacagagaccccacggacccctcaccagaccgtccgaacagctcggctaccttgct
attatacagggcttacaggttgaatacaaagactttcccaaaaataacaagaatgagttt
gtctctctaatcaactgctcctctcagccccctctcatcagccacggcatcggcaaggac
gtggagtcctgccatgacatggctgctctgaacatcctgaagctcctgtcagaacttgac
cagcagtccaatgagcgcacagctaatggaccaatgacaggatgcaacaaacaagacctt
gagggtgatgcattattaaaaccggctaactcaagcaccatcggaaagactctggacggc
acagtgtag
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