Onychostoma macrolepis: 131542952
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Entry
131542952 CDS
T09350
Symbol
atg4c
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc04136
Autophagy - other
omc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131542952 (atg4c)
04136 Autophagy - other
131542952 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omc01002
]
131542952 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131542952 (atg4c)
03029 Mitochondrial biogenesis [BR:
omc03029
]
131542952 (atg4c)
Peptidases and inhibitors [BR:
omc01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
131542952 (atg4c)
Membrane trafficking [BR:
omc04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
131542952 (atg4c)
Mitochondrial biogenesis [BR:
omc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131542952 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
131542952
NCBI-ProteinID:
XP_058636066
LinkDB
All DBs
Position
06:complement(19322229..19330021)
Genome browser
AA seq
476 aa
AA seq
DB search
MCCDGFCSVADKMETKGTDEVEKLKSKFMSAWHNVKYSWALKSKTAFSRNSPVFLLGKCY
HFKAVDDESPTESCTAEALDDNIVTGNVDGFRKDFTSRVWLTYREEFPALPGSTITSDCG
WGCTLRAGQMILAQALLLHILGRDWTWSEALTLEPLDTETWTSSAARRLVATLEASIQGE
RXQVIQPICAAQGGAEEADSYLQEAYHRTIVSWFGDAPSAQLGIHRLVQLGMTSGKQAGD
WYGPAVVAHLLRKAVDEAVDAMLKGISVYVAQDCTVYSADVIDSHSEQAGSHSDPQELNS
GAAPDSRAVIILIPVRLGGEKINPEYLSFVKSILSLEYCIGIIGGKPKQAYYFVGFQDDS
LIYMDPHYCQSFVDVSTSDFPLQSFHCPSPKKMPFNKMDPSCTIGFYSKNVEHYERISNE
LSKILQPSSKEKYPAFTFMKGHGKDYELSVAVEKREWPFIGDTRKPGTTSGDFVLL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtgatgggttctgctccgtggctgataaaatggagactaaagggaccgacgag
gtggagaaactgaagtccaagtttatgtcagcatggcacaatgtgaaatatagttgggct
cttaagtcaaaaactgccttcagccgtaattctcctgttttcttgttggggaaatgctac
cacttcaaggctgtggatgatgaaagccctactgagagttgtactgctgaggcattagat
gacaatattgtcaccggtaatgttgatggatttcgaaaggacttcacctcgcgagtttgg
ctgacctatcgagaagagtttcctgctcttcctggctccaccatcacttcagactgtggg
tggggttgtacactccgggcagggcagatgatattggcccaggctctcttgcttcacatc
ttgggtagagactggacctggtcagaagcactgaccttggagcccctggatacagagaca
tggaccagcagtgcagcacgaagactggtggcaacattagaggcctccattcagggggaa
aganngcaggtcatccagcctatctgtgctgctcaaggaggggctgaggaggctgactcg
tacctgcaagaggcgtatcaccgcaccattgtgtcctggtttggggacgcaccctcagcc
cagctgggcatccacagactagtgcagctaggaatgacatctggaaaacaggcaggagat
tggtatggcccagcagtggtggcacacttactccgaaaagctgttgatgaagcagtagat
gcgatgctgaaagggataagtgtttatgtagcacaggactgcaccgtgtacagtgctgat
gttatcgatagccattcagagcaggcgggcagccacagcgatcctcaggaactcaattct
ggagctgcccctgatagtagagctgtcatcatcctcattcctgtgagactcggtggagag
aaaatcaacccggaatacttgagctttgtcaagagcatattaagcttagagtactgtatc
ggcatcattggcggaaagcctaaacaggcctactattttgttggatttcaagatgacagc
ttgatttacatggatcctcattactgtcagtcttttgtggatgtcagcacaagcgatttc
cctctgcagtcttttcattgcccatcaccaaagaaaatgcctttcaataaaatggaccca
agctgtacgattggattctactcaaaaaatgttgaacactatgaaagaattagcaacgag
ctgtcaaagatattgcagccttcatcgaaagagaagtaccctgcattcacctttatgaag
ggacacgggaaggattacgaactttcagttgctgtagaaaagcgagaatggcctttcatc
ggggacacaaggaaaccagggacaacatcgggagactttgtgctgctctga
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