Onychostoma macrolepis: 131543095
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Entry
131543095 CDS
T09350
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131543095 (ddx17)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131543095 (ddx17)
Spliceosome [BR:
omc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131543095 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131543095
NCBI-ProteinID:
XP_058636306
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All DBs
Position
06:11628545..11642640
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AA seq
693 aa
AA seq
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MQKLHLNFVYNILFQHTTTSPISEIHISTNQVEEMRGSSSYGDRDRDRGRDRGPRFGSSR
VAPPPPKKFGNPGDRLRKKKWDLDQLPKFEKNFYSELPEVHHYDIEEYRRKREITVRGSG
CPKPVTNFHQAQFPQYVVDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAY
LLPAIVHINHQAYLERGDGPICLVLAPTRELAQQVQQVAYDYGKSSRLKSTCVYGGAPKG
PQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ
IRPDRQTLMWSATWPKEVRQLAEDFLHDYVQINIGALELSANHNILQIVDVCMENEKDNK
LIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLSEFR
SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG
NLRQARDLVRVLEEARQAINPKLLQLVDTGRGGGGGGRMRYRGNNSGSNNPNLMYQDECD
RRMRSVTGSNKGSRSDNMSRDARSGGSGRDDRMPSSYRDRSRDGRNNYNSGPSYNSGGGD
QYQSCGGSRGGQYGSRGGGSHPGVGAGGQDQAGPPQGLFGAPPPTPPQPGPGPQPLMAQQ
FPPPPQPIMGFMGPGSYPFASPPPPLPPPPPRK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaactacacctgaactttgtctataacattctctttcaacatactactacttca
ccgatttcagaaatacacatttccacaaaccaggtagaggagatgagaggaagttcctca
tatggagaccgagacagagatcgaggacgagacagagggcctcgctttggatccagtcga
gttgccccacctccacccaaaaagtttgggaatccaggagatcggctgaggaagaagaaa
tgggacctggaccagttgcccaagtttgagaagaacttctacagtgaactcccagaggtt
catcattatgatatagaagaatatcgccggaagagagagatcactgtcagaggctccggc
tgtccaaagcctgtcaccaacttccatcaagctcagtttcctcaatatgtggtggacgtg
ctgctgcagcagaattttaaggagcccactgctattcaggctcaaggttttcctttagct
ctcagtggcagggacatggtgggcatcgctcagaccggctccggaaaaacactggcttat
ctgctgcctgccatagtgcatattaaccatcaggcctacctggagagaggggatgggccc
atttgtcttgtgttggcaccgacacgtgaattagcccagcaggtgcagcaagtggcttat
gactatggcaaatcatctcggctcaagagtacctgtgtgtatggaggagcccctaagggt
ccgcagatcagagatttagaaagaggtgttgaaatctgcattgccacacctggccgtctg
atcgatttcctggaggcaggaaaaacgaacctgcgccgttgcacatatcttgtgctggat
gaggccgatcgtatgttggacatgggatttgaaccccaaatccgcaaaattgttgaccaa
attagacctgacagacagactctcatgtggagtgctacctggcctaaagaagttcgtcag
ctggctgaagatttcctccatgactatgtccaaatcaatataggagctctagaattaagt
gcaaaccacaacatcctgcagatagtggatgtctgcatggagaatgaaaaagacaacaag
ctgattcagctgatggaagaaatcatggctgaaaaggagaacaaaaccatcatctttgtc
gagacaaagaaacgttgtgatgaacttactcggaggatgcgaagagatgggtggcctgca
atgtgtattcatggtgacaagagccaaccagagagggactgggtactatcagagttccgc
agtggaaaagctccaattttgattgctaccgacgttgcctcacggggtctggatgtggag
gatgttaaatttgtcatcaactatgactatccaaactcttcggaggattatgttcatcgc
attgggcggacagcccgcagcaccaacaaaggaacagcctataccttcttcacccctggg
aaccttcggcaggctcgtgatttggtccgggttcttgaggaggctagacaggccatcaac
cccaaacttctgcagctggtggacacaggccgtgggggaggtggaggtggaaggatgcgc
tatcgtggcaacaactcaggctcaaataaccccaacctgatgtaccaggatgaatgcgat
cgccgcatgcgctctgtaactggaagtaacaagggcagccgtagcgacaacatgagccgt
gatgcaaggtcaggggggagcggccgtgacgaccgtatgccctcttcttacagagaccgc
agcagggatggacgaaacaactacaactccggaccctcctacaacagcggaggaggtgac
caataccagagctgtgggggctccagaggggggcagtatggctccagagggggaggctca
catccaggtgtgggtgcaggagggcaagatcaggctggacctccccaaggtctgtttgga
gcgcctccaccaactcctcctcagcctgggccgggtccacaaccactcatggcacagcag
ttccctcctccaccacagcctatcatgggattcatgggtcctgggtcatatccatttgcc
tcaccaccaccaccccttcctcctcctcctcctagaaagtag
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