Onychostoma macrolepis: 131543378
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Entry
131543378 CDS
T09350
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131543378 (chd9)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131543378 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
131543378
NCBI-ProteinID:
XP_058636634
LinkDB
All DBs
Position
07:complement(26862506..26939799)
Genome browser
AA seq
2951 aa
AA seq
DB search
MTDPIMDFFDDPSIFGGGLDSLVQDDPGFTPGSVSLDDELQLGPSLQTLQVDAGSRSSTI
QHGIPYNQPVGHFDTMKAQTSMEQSFPGPEGGGNNGRTFLPQQQSFQGHTMNQVPQTNGL
FLHNSPMWGNHDQKGNNYHQHNQHHQQIHHQQLQHKQFQQQQQFQQHQAQAQHQQYSQQH
QHLQHRQHSLNQHPISNQLQLPHQQIAHQGLHHIGKTYQEHTGFYYESNVPQNHSQHGHH
NSLGVEGSPFHSTVEASMMPVSSQQHSGFQISQGVPGFTTGPRLEDNDLAFPVQSSPATH
SFPTDSVSHTSSYPTGHYTLTGQPPPIVNATQPYSSAPVSMTTSSTAIPSSASNLLSTGC
PFLSNSGIEHPQQRVQIPGSSAQRCPLNSSKSNQDSFNSSKVFPDGLNSFGADCSFSTAD
RRSHDVAGPLVTSQSSSNGFQALEEVLLGEQHGHRLDLGDAPDLLGDELLPQLEALDQEE
NSNHSWVNAGLENDQEEDMKDEEGMEDVPMVYNAQPPKNTNGPSSQPRVLSPSVKSSSSS
SSSSSSYISVSEKRAQKRQQQEQQMESSLSDDKQQKANRIISEAIAKARERGEKNIPRVM
SPESFPSSSSQHRSHRAGSSKSRGKSKSSKKARIVTSSKSKQKAQIGKIVIKLGKKKRKK
TDSSEELSDDDRPTRRSSKDDDSKRRSNRKVKRKKYEDDGEARLSDEEMKVIVKAKKSNS
SAHKQPAVQLFVENPTEEDAAVVDKIMASRVVKNEVSSGVMVETEEYYVKYKNYSYLHCE
WATEQQLVKDKRIQQKIKRFKIKQAQRAHFFADMEEEPFNPDYVEVDRVLEVSYCEDKDT
GEPVVYYLVKWCSLPYEDSTWELKEDVDQTKIKEFKKLQAAKPSANRVERPPASHWKKRE
QSREYCNGNCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEIYRTGIKG
PFLIIAPLSTIANWEREFRTWTNLNVIVYHGSVVSRQMLQQYEMYFRDAQGRVIRGAYRF
QAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPL
QNTVEELFSLLHFLEPTRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKK
LAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYL
IKGAEEKILEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVR
CLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMFDRASLKLGLDKA
VLQSMSGRDNSTGGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQR
RTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVI
DTPRVRKQTRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVY
GWGRWKDILAHGRFKRQLSDRDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRT
KELQNHLGLSTPVPRGRKGKKMKIQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCN
KVLLRVRMLYYLKQEVIGVQCQKVLDGADASEIEIWVPEPDHSEMPALWWDMLSDKCLLL
GVFKHGYEKYNTIRADPALCFLERVGRPDEKAIAAEQRGNDIMDGDVDDPEYKPAPALLK
DDMEDDASSPGDLVITDTGGEGGSVLDCGGGGTLGAGSGMYWPSTSALTARLRRLITASQ
RFTKSRQILQIHQTQQAMTPALYPLPPTISDTLNPKIAAKIERQQRWTRREEADFYRVVS
TFGVVFDPDLGCFDWTKFRAMARLHKKTDESLHKYLCAFIAMCRRVCRLPAIEGDMMDSS
LAIQPITEERASRTLYRVELLRKIREQVLRHPQLYERLALCQPGPDLPVWWETGSHDRDL
LLGAAKHGVSRTDYHILRDPELCFMVAQRNYSQNKGTAAQVQAQNQTPSLGQCHIPTPLQ
HIQAKEASASPLPSQTELKEEPLSEREEESGEQNPKMETPSIRPPTPSGVDEKDDIHKVG
ENESRMVAARTKPLTPNSVTRKQKKLSKRSRREARRGSGSDSDSDGSSSSSSSSSSSRSS
SSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEDSDSEEVPKKASAVPGVKGFDEDS
FASLNTTQDDMQDSHVTNGVSNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKW
PGVRRAYEGNAVTSFYTTKLLDNTTTLTEDPSASPQGSKVKKHVADREKEFSVKINDQEG
SLKLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTQNSYPQVLPE
QMRLNGVMDGQPVIKKRRGRRKNVEGMDLLFMNRNRPPMMAEQTPAGWSSSVASTSAPPG
LSTPQGLSTLDTETRVPVISLKDGTRLAGEDAPKRKDLDQWLKEHPGFVADVGAFIPTAN
KLQFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQ
ENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKAATVASAS
ANAALGLNPLLTNGLLAGLDLPSLQALQHNLQSLQSLQLTTGLMGLPQDPTNMATMFPMM
LSGMTGLPNLLGMSGILGKQEAAGVTLTSDEDGKKKSGRESATPKVSVETLSPDGKVERT
EGQSSKATSSTAANSNQTSASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAAN
TQPTPPLQPAASEATAQLPGRSEDKDSDEGEEPDEKKDTSGPEGSVKAESSSSESDSSSS
SSEDSDSSDED
NT seq
8856 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccatcatggacttctttgatgaccctagcatatttgggggagggcttgac
agcttagtccaggatgatccagggtttacccctggttctgtgtccttggatgatgaactt
caactgggtcctagtttgcagactcttcaggtggatgcagggtccagatcttctaccatc
caacatgggataccctacaaccaacctgtggggcattttgacactatgaaggcacagacc
tcaatggaacagtcctttcctggtccagaaggaggtggcaacaacggaagaacatttttg
ccacagcagcaatcatttcaagggcatactatgaaccaagtgccccagaccaatggactg
tttcttcacaacagccccatgtggggaaaccatgatcaaaaagggaataactaccatcag
cacaatcaacaccatcaacaaattcatcatcaacaacttcaacataaacagtttcagcag
caacaacagtttcagcagcatcaagctcaagctcaacatcagcagtacagtcagcaacat
caacatcttcagcatagacagcacagcctcaatcaacacccaatctcaaaccagctgcag
ctccctcaccaacaaatagcccatcaaggcttgcatcatattggcaagacctatcaggag
catacaggtttttactatgagagcaacgtccctcaaaatcattcccagcacggccaccat
aactcgcttggtgtggagggtagtccctttcactctacggttgaggcctcaatgatgccg
gtgtcttctcaacaacacagtggctttcaaatatcccaaggggtcccaggttttactaca
ggtccaaggttggaagacaatgacctggccttccctgtccagtcttcccctgcaacccat
tctttcccaactgactcagttagccacacttcatcctatccgactggtcattatactctg
actggtcagcctccccctatagtaaatgcaacccagccttactcctctgccccagtctct
atgacaacctcttcaacggccatcccatcatcagcttcaaaccttttgagtactggttgt
cctttcctgtctaattctggaattgaacatccgcagcaacgagtccaaataccaggcagt
tcggcacaacggtgccccttaaatagctccaaatcaaaccaggattccttcaactcttct
aaggtgttcccagatggtctgaattcattcggtgctgactgttcattctctacggcagat
cgaaggagccatgatgtggctggacctttggttacaagccagagcagcagtaatgggttt
caggcactggaggaggtcttgcttggagagcaacatggtcacagacttgacctgggtgat
gctcctgaccttttaggggatgagctgttgcctcagctagaggcactagaccaggaagag
aactccaatcactcttgggtaaatgcaggactagagaatgaccaagaagaggatatgaag
gacgaagaaggcatggaggatgtgccaatggtttacaacgcacagcctcctaagaacact
aatggtcccagcagccagccgcgggtactcagcccatcagtgaagagtagctcctcttct
tcctcttcatcatcctcgtacatatccgtgtcagagaagcgggcacagaagcgacagcag
caggaacagcagatggagtcgtccctttcggacgataaacaacagaaggccaatcgaatc
atctcagaggccatcgccaaagcacgagagaggggagagaaaaatattccgcgcgtcatg
agtccagaaagcttcccgtcttcttcgtcgcagcaccgcagtcacagggccggttcttcc
aagtccagaggcaagagtaagagttccaagaaggcccggattgtgacgtcatccaagtcc
aaacaaaaggctcaaattgggaaaatcgttataaagcttggaaagaagaagcgaaagaag
acagattcctctgaagagctgtctgatgatgacagaccaactcgacgatcctctaaagat
gatgattcgaagcgacgttcgaaccggaaggtcaagaggaagaagtatgaggatgatggc
gaggctcgattgtccgatgaagaaatgaaggtcatcgtaaaagccaagaagagcaactcc
agcgctcacaaacagcctgcggtgcaactgtttgtggagaacccgactgaggaagatgct
gctgtggttgataaaatcatggcatctcgtgtggtgaaaaatgaggtttcttctggggtg
atggtagaaactgaagagtattatgtcaagtacaaaaactactcgtatcttcactgtgag
tgggcgacggagcagcagttagtgaaagacaagaggatccagcagaaaatcaagcgcttc
aagatcaaacaggcgcagagagcacacttctttgctgatatggaggaggaaccattcaat
cccgactatgtagaagtggaccgagttcttgaggtctcatactgtgaggacaaggacacc
ggagagccggtggtgtattacctggtgaaatggtgctcattgccgtatgaggacagcaca
tgggagttgaaggaagatgtagaccagactaaaattaaagagttcaaaaagctgcaggca
gcaaaaccaagcgccaacagagtggagcgtccaccggcgagtcactggaagaagcgggaa
caatcacgagagtattgtaatggaaactgtctcagggattaccagctggagggggtcaac
tggcttctcttcaactggtataacaggcgtaactgtattctggcggatgagatgggtctg
ggaaagaccatccagtccatcacatttctggatgagatctatcgcacagggatcaagggg
cctttcctcattatcgcccctctctctaccatcgctaactgggagagagagttcagaacc
tggacgaacctcaacgtcatcgtataccatggcagtgtggtcagcagacagatgctccag
cagtatgagatgtacttcagagatgctcagggtcgtgtgataagaggtgcttaccggttt
caggcggtcattacaacatttgagatgatattgggaggctgtccagaacttaacgcaata
gactggcgctgtgtcatcattgatgaagcccatcggctcaaaaataagaactgcaagcta
ctggagggcttcaaacttatgagtctggaacataaggttttgttgacgggcactccgctg
caaaacacggtagaggaactcttcagtctgctgcacttcctggagccgacccgcttccct
tctgaaagcaccttcatgcaggaatttggagacctcaagactgaggagcaggtccagaaa
ctccaggccatcctgaaaccgatgatgctgcgtcgtcttaaggaagacgtggagaagaag
ttggcccctaaagaggagaccatcattgaagtggagctcaccaacatccagaagaaatac
taccgcgccatcctggagaaaaacttctcattcctggctaagggagctggccaagccaac
gtcccaaacctgcttaacaccatgatggaactgcggaaatgctgcaaccatccctacctc
atcaaaggggctgaggagaagatcttagaggacttcaaggaggtgtacagccccgcagca
gtagatttccacctgcaggctatgattcagtcagcaggtaaactcgttctcattgacaag
ctgctccccaagatgaaggccggtggacacaaagtgctcatcttttctcagatggtgcgc
tgcctggacatcctggaagactacctcatccagagaagatacctctatgagcggatagac
ggccgtgtacgtgggaacctccgtcaagcagcaatagaccgtttcagtaaaccagactcc
gatcgattcgtcttcctgctgtgtactcgagcaggtggacttggtattaacctcacagct
gccgatacctgtatcatctttgactctgactggaatcctcagaacgacctgcaggctcag
gctcgctgccacaggattggacaggataaagcagtaaaagtatacagactaatcacacgt
aactcatatgagcgagagatgttcgatagagccagtctaaagctgggattggataaagca
gtgcttcagagcatgagcggacgagacaacagtacaggaggaggagggcagatgcagcag
cagctctctaagaaggagattgaggaccttctgcggcgtggagcttatggtgccatcatg
gacgaggaagatgagggggctaaattttgtgaagaggacattgaccaaatcctgcaacgc
agaaccaagaccatcactatagaatctgagggtcggggctccacctttgccaaggccagt
tttgtagcttcagggaacagaacagacatctctctggatgaccccaacttctgggacaag
tgggctaagaaagcagagattgacatggatacagtcaatggcagaaacagtctggtgatc
gacacccctcgtgtcaggaaacagacccggccgttcagcgctactaaggatgagctggcc
gagctctctgaaggggagagtagtggagatgacaaacccaaactccgccggccacatgac
cgcctcaacagctatggccgcacagagtgcttccgggtagagaaaaacctcttggtgtac
gggtggggccgctggaaggatatcctggctcacgggcgctttaagcgtcagctgagcgac
cgtgatgtggaatcgatatgcagagcactcctagcatactgcctcgttcattaccgtgga
gatgataaaattaagagcttcatgtgggatctgatcgctcccacagaggacggcaggacc
aaggaacttcagaaccatttgggtttgtcgactccagtgccacgaggcagaaaaggaaag
aagatgaagattcagtctagctcatttgatatccagaaggcagaatggatccgaaaacac
aacccagaacacatgttgtctgatgatgggtacaagaaacacctgaaacaccactgcaac
aaggtgctactgagggttagaatgctgtactatctgaaacaagaagtgattggagtacag
tgccaaaaagtgctggatggggcagatgccagtgagatagagatctgggttcctgagccg
gatcattcagagatgcctgcgctgtggtgggacatgctctcggacaaatgtctgctgtta
ggagtctttaagcacggttatgagaagtacaacactattcgtgcagatccagcactgtgt
ttcttagaaagggttgggcggccagacgagaaggccatcgctgctgaacagagaggaaat
gacattatggatggagatgtggacgaccctgagtataagcctgctccagctttgctgaag
gatgatatggaggatgatgcttcttccccaggagacctggtcatcacggatacaggcgga
gaaggagggtctgtattagattgtggtggtggtgggactttgggtgctggatcagggatg
tactggccctcaacctccgcactgacggcccgactgcgacgtctgatcactgcttctcag
cgcttcaccaagagcagacagatacttcagattcatcagacacagcaggccatgacccct
gccctctaccctctgccccccacgatcagtgacacactcaatcccaaaattgctgccaag
attgaaagacaacaacggtggacacggagagaggaggcggatttctatcgtgtggtttca
acatttggggtagtgtttgatccagatttgggctgctttgactggaccaagttcagagcc
atggctcgactgcacaagaaaactgacgagagtctacacaagtacctgtgtgcctttatt
gccatgtgcaggagggtctgccgcttgcccgctatagagggagatatgatggactcttct
cttgctatacaaccaatcacagaggagcgtgcctcccgtaccttatacagagtggagctg
ctgcggaagataagagaacaggtgttgcgtcacccgcagctttatgagcgtctcgcactg
tgccagccaggaccggatcttccagtgtggtgggaaacaggatcccacgatcgggatctt
ctgcttggggcggccaaacatggagtcagccgaacagactaccatatcctccgtgaccca
gagctctgctttatggtggcacagagaaactacagccagaacaagggaactgcagcacaa
gtccaagcccagaatcagacgccttcactgggacagtgtcacatcccaacccccctccaa
catattcaggctaaagaggcttctgcttcaccgctcccaagccaaactgaactgaaggaa
gagccgctgtcagagagagaggaagagagtggagagcaaaatcccaagatggagacaccc
tctatcagaccacccacaccttcaggagtggatgagaaagatgacatacacaaagtggga
gagaacgagagccggatggtggcggctagaacaaaaccgctcacgccgaactcagtaact
cgaaaacagaagaagctgagtaaacggagccgcagagaagccaggagggggtcgggatcc
gactcagactcggatggctcctcatccagctcttcgtcaagttcttcatcaagatcttct
tcctcatcctcatcttcatcacggtctggatccagttcctcgtcttcatcttcctcctgt
tcttcaggttcttcgtcttcatcatcatcgtcatcctcgtcttcagaagacagtgacagc
gaggaggtaccaaagaaagcttcagcagtgcctggtgttaaaggctttgacgaagacagc
tttgcctctctcaacactacacaagatgacatgcaggacagtcatgtgaccaacggtgtc
tctaaccctccacaccctttccagggaggttatatgcttgctgcctcctactggccaaag
gaccgtgtcatgataaaccggttggacagtatatgtcaggcagtgttgaaggggaaatgg
ccaggggttcgtcgtgcatacgaaggcaatgcagtgacttctttctataccaccaaactg
ctggacaacacaaccacgctcacagaagacccttcagcctcccctcagggttcaaaggtg
aagaagcatgttgcagacagagaaaaggagttctcagtcaaaatcaatgaccaagagggc
agcctcaaactgaccttccagaagcaaggtttgcctctgaagcgccccctggagggtgag
gagggacctcttgcccagcagcagtacttagcccggctccaagagttacagaacgcatct
gataccagccttgcagactacaccaaaacacagaacagctatccacaagtactgccagag
caaatgcgtctgaatggagttatggatggacagcccgtaataaagaagaggagaggacgg
cggaagaatgtggaggggatggacctgctgttcatgaacagaaacaggcctcctatgatg
gcagagcagactcctgctggctggagtagcagtgtcgccagtacatccgctccccctggg
ttgagcacacctcaggggctcagcacccttgacacggaaacccgcgttcccgtcatcagc
ctcaaagatgggacgcgactagccggagaggacgctccaaaacggaaagatcttgaccag
tggctaaaagagcacccaggcttcgtggcagatgtgggagcctttattcccaccgcaaac
aagctgcagtttcaagatggcagaccaaaacagaagagacatcgctgcagaaacccaaac
aaaattgacatcaacagcctgactggagaagagcgagtacagatcatcaacaggcgaaat
gctcgcaagattggtggtgcatttgctcctcctctgaaagatttaagtcggttcctgcag
gaaaatccagagtatggtgtcccaccagagtgggctgacgttgttaaacagtctggttac
cttcctgaaagtatgtttgaccgtatcctgaccggccccatcgttcctgaagaagtgagc
cggcgaggacgacgtcccaaaaacgctttggctaaagcagccaccgtggccagtgccagt
gccaacgccgccctggggctcaacccgctcctaaccaacggcctcctcgccgggctggac
ctgcctagtcttcaagctcttcagcacaacctccagagcctccagtctctccaactcacc
accggcctcatgggactgcctcaagaccccaccaacatggccaccatgtttccgatgatg
ctgtccggaatgaccgggctgccgaacctcctcgggatgagcggtatcctcggaaaacag
gaagcggcgggtgtgactttgacgagcgacgaggatgggaaaaagaagagcggtagagag
tccgccacacccaaggtgtcggttgagactttgagtccggatggcaaagttgaaaggaca
gagggtcaaagctccaaagccacctcctcgacagccgccaactcaaatcaaacaagtgct
tctgcttcaggccacccactggccctcaacccccttctcctctctagtatgctctaccca
gggatgcttcttacgccaggccttaacctgcctgtggccaaccagccgcaagctgcaaac
actcagccaaccccaccactgcaacctgctgcctccgaagccacggcgcagctgcccggc
cgttctgaggacaaagacagcgatgagggggaggagcctgacgaaaagaaggataccagt
ggtccagagggctcagtgaaggcggagtcatcctcctccgagtctgacagctcctcctcg
tcatccgaggattccgattccagcgacgaagactga
DBGET
integrated database retrieval system
