KEGG   Onychostoma macrolepis: 131543552
Entry
131543552         CDS       T09350                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
omc  Onychostoma macrolepis
Pathway
omc04382  Cornified envelope formation
omc04510  Focal adhesion
omc04512  ECM-receptor interaction
omc04518  Integrin signaling
omc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    131543552 (col4a5)
   04518 Integrin signaling
    131543552 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    131543552 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    131543552 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    131543552 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omc04147]
    131543552 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:omc00536]
    131543552 (col4a5)
Exosome [BR:omc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   131543552 (col4a5)
Glycosaminoglycan binding proteins [BR:omc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   131543552 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 131543552
NCBI-ProteinID: XP_058636974
LinkDB
Position
07:17679383..17734615
AA seq 1680 aa
MNLKGLGAVLLVLLTISTEVRKSESAACHGCGTGPKCDCSGVKGQKGDRGYPGLTGQTGV
PGFPGPEGPIGPRGEKGDDGPSGPGGPKGIRGPSGLPGFPGTPGIPGLPGQDGAPGPKGV
PGCNGTKGERGFLGSPGLPGLVGSPGPPGFIGQKGEPGDVIEINRPSEKGTPGFNGLPGS
RGDPGPPGLPGPVGPSGPQGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGDRGLKGPPGPP
GQVGEVSGLPDTVIQQGEKGDRGPPGDPGFPGSPGPPGPQGGQKGEKGETGDLGKRGKPG
KDGEQGLPGYPGDKGEPGPPGLSGRDGSRGVKGDRGPPGPPSYRDGPFPGIGGIGPKGDS
GEPGFPGPKGDRGLPGIQGPSGPPGPAGIGGPGPSGPPGLPGERGEKGDEGKPGSTVPGT
PGRTGPPGSQGVPGPPGPPGILNGNTECTRGPPGPPGLQGERGFTGETGQRGQKGETCVN
CFTNGNPVPGPPGFPGPPGNPGAPGLPGSIGDRGFPGGPGLMGPPGIPGPEGLPGVPGEK
GDSGNALPVPGVRGEKGDTGFPGPPGLPGLDGRPGRDGVPGPPGLRGPPGSALVKGSQGP
PGEPGLPGPAGDRGQPGPPGFGPQGPPGEKGIQGVSGRSGAPGAPGQKGEPGLAVSEKGE
RGPSGRDGDPGLPGSPGNPGLPGQPGFPGLPGPKGDTGLPGIGLPGPPGPKGFPGIAGSP
GGPGIPGRPGLDGLPGQPGFPGSKGEPGFALPGPLGPTGLPGSKGASGPKGDPGFPGSPG
APGRPGLDGAFGSKGDPGFPGGPGPRGPPGPPAFGLQGPPGPPGAPGSMGSPGVPGANGE
KGDRGPPGSSFPGLQGDRGSPGFPGPPGPAGPPGGPGLLGQDGLPGLPGSKGDIGGMGAP
GPAGASGNPGRQGFPGPKGDDGVPGRPGSPGFPGSKGDRGDPGIPGPPGLGPPTNLLKGQ
KGESGVPGFSGPPGAKGIPGIPGDPGFPGQDGRPGQPGPSGPKGDLGIPGTPGSPGAQGL
KGSMGEMGLPGVPGVKGNSGQPGRPGQSGSPGTRGFPGPKGDPGSPGFGAPGAPGPKGES
GSPGFPGTPGLKGQPGFSGPPGLPGSPGLKGDPGLPGFQGSPGIPGQKGLDGAPGTPGPS
GASGRPGDPGRPGLPGLPGDKGLAGRDGIPGPPGQKGEAGAPGLGGPGPPGFPGSPGPKG
DPGFPGPAGSPGFPGSKGDAGFPGLPGPVGPGGSPGPPGLPVQGPKGFQGPPGSPGRAGP
PGPEGTRGPPGSGGVKGEKGMPGTPGTPGAPGLKGDYGPPGFPGTPGNPGPSGLKGDTGP
QGVPGFPGPKGQPGLPGSNGIPGERGESGTPGSPGEPGFAPDPILLKGERGSPGPPGIPG
SRGPTGPLGLQGLPGSPGDPGDPGPMGPPGFTGSPGRKGDTGPAGQPGQRGYPGPPGPEG
IQGPPGIAGSSSAAHGFLITRHSQTTEVPSCPGDTSLIYDGYSLLYVQGNERAHGQDLGT
AGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMNMAPITGESIKPFISRCS
VCEAPAMVIAIHSQTIQVPSCPNDWSVLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFR
SSPFIECHGRGTCNYYSNSYSFWLATVDVNEMFRKPQSETLKAGNLQTRVSRCIVCMKRT
NT seq 5043 nt   +upstreamnt  +downstreamnt
atgaacttaaagggtctcggcgcggtgttactggtgcttctcactataagtacagaggtg
cgcaaatcggagtctgcggcgtgtcatggttgtgggactggaccaaagtgtgactgcagt
ggggtgaaaggacagaagggtgatcgagggtatccaggtttaacgggccaaacaggtgtt
ccaggtttcccaggaccagaagggccgattggacctcgtggagagaagggtgatgatgga
ccttcagggccgggtgggcctaaaggaataagaggaccttctggattgccaggcttcccg
ggaacaccaggaatcccaggtctcccaggacaggatggcgccccaggacccaaaggagtt
ccaggctgtaacggaaccaaaggtgaaagaggattcttgggaagtccaggccttccaggt
ttagtgggttcaccaggtccaccaggttttataggacaaaagggggagcctggggatgtc
atagaaattaatcgcccatcagaaaaggggactcctggctttaatggtttaccaggctcc
aggggtgatcctggacccccgggtcttccaggtcctgttggtccttctggtccacaaggg
tatgaggggcgtccaggcccacctggtccaccagggccaaagggaaacatgggattgaac
ttccaaggacccaaaggagagaagggtgaccgtggattaaaaggacctcctgggccacca
gggcaggttggcgaagtatcaggcttacctgatacagtcattcaacaaggagaaaagggt
gatcgcggcccacctggagatcctggttttccaggttcccctggaccccccggtccacaa
gggggccagaaaggtgagaaaggagaaactggggaccttggaaagagaggaaaacctggc
aaagatggtgaacaaggcctccctggatatccaggtgataaaggagaaccaggtcctcct
ggtctatcggggcgagatggttcaagaggtgtgaaaggtgatcgaggacctcctggacct
ccatcatacagggatgggccgttcccaggcataggtggaataggaccgaaaggagacagt
ggcgagccaggattccctggccctaaaggagacagaggactgccaggtatccaggggcca
tctggtccaccaggtcctgcaggaattggaggtccaggtccttctggtccaccaggttta
cctggagagagaggagaaaaaggtgatgagggaaagcctggaagcaccgtccctggaaca
cctgggagaacaggtccaccaggctcccaaggagtcccaggacctcctggtcccccagga
atattaaacggcaacacagaatgtactcgtggtcctcccggtcctccaggcctgcagggg
gagcgaggatttactggagaaacaggacagagaggtcaaaaaggagagacatgtgtcaat
tgtttcactaatggaaaccctgtcccaggacccccagggtttccaggtcctcctggaaat
ccaggtgcacctggtttgcctggatctataggagacagaggattcccgggagggccaggg
ctcatgggcccacctgggataccaggacctgagggtctccctggagtccctggagagaag
ggcgactcaggcaatgcactccctgttccgggtgtgagaggtgaaaagggagacacaggc
tttcctggccctccaggtctgccgggacttgacggaagacctggtcgggatggagttcct
ggtcccccaggcctcagaggaccacctggttcggcattagtgaaaggctcacaaggtcca
ccaggtgaacctggcttgccaggacctgcaggagacaggggtcagccgggtcccccggga
tttggtcctcagggacctcctggagagaaaggtatccagggtgtttcaggaagatcaggg
gcccctggagcaccaggtcagaaaggtgaacctgggttggcagtgtcagaaaaaggtgaa
cgtgggccctcaggacgtgatggagatccaggtttgccaggaagtccaggtaatccaggc
ctaccaggacagcctgggttccctggcttacctggacccaaaggagatactggtcttcct
ggtattggtttgccaggaccccctggtcctaaaggatttcctggtattgctggttcccct
ggtggacctggtattcctggacgaccaggtttggatggactgcctggtcagcctggattt
cctggatccaaaggagagcctggttttgctctacctggacctctaggtcctacaggatta
ccaggcagtaaaggtgcttcaggtcctaaaggtgatcctggtttccctggaagccctggt
gcaccaggtcgtccaggtcttgatggtgcctttggatctaaaggtgatcctggttttcct
ggtggtcctggtcctcgtggccccccagggcctcctgcctttggccttcagggccctcct
ggtcctcctggagctcctggctctatggggtctcctggtgtccctggtgcaaatggagag
aaaggagaccgtggccccccaggttcgagttttccagggttgcaaggtgacagaggaagc
cctggatttcctgggcctcctggtcctgctggtccacctgggggtccaggactacttggt
caagatggcctaccaggactgcctgggtctaaaggagacattggtgggatgggtgctcca
ggacctgcaggtgcctctggcaaccctggcagacaaggctttccaggaccaaaaggagat
gatggtgtcccaggacgaccaggaagcccaggtttcccgggatcaaagggagacagaggt
gacccaggcattccaggcccacctggcctaggcccacctacaaatctacttaagggacaa
aaaggagaatccggagttccaggttttagcggaccaccaggagcaaagggtattcccggt
atccctggagatcctggtttccctgggcaagatggaaggccaggtcaaccgggaccttca
ggccccaaaggtgatcttggtattccaggaactccagggtctccaggagcacaaggactg
aagggtagcatgggggagatgggattaccaggagttcctggagtgaaaggaaactccggc
caaccaggccgacctggccagtctggttccccaggaacacgagggttccctggacccaaa
ggtgatcctggctcaccaggatttggagcaccgggagctcctgggccaaagggtgaatca
ggctctccaggatttcctggaacccctggtctgaaaggccagcctggcttttcaggacct
ccaggcttgcctggtagccctggactaaagggtgatccaggactcccagggttccaaggt
tctcctggcattcctggccagaaaggtttggatggtgctccgggcactcctggtcctagt
ggagcatctggtaggccaggagatcctggacgacctggattacctggcctccctggtgat
aaaggtcttgctggtcgtgatggtattccaggacctccaggacaaaagggtgaagcaggc
gctccaggccttggtggcccaggcccacccggtttccctggttcaccagggcctaaagga
gaccctggttttccgggtcctgctggtagtcctggatttcctggttcaaagggtgatgca
ggatttcctgggttgcctggtccagttggtcctggaggatcacctgggcctccaggcctg
cctgtgcagggacctaaaggtttccaaggtccacctggttcccccggaagagctggtcct
cctggccctgagggtacccgtggacctccaggtagtggaggagtaaaaggtgagaagggc
atgcctgggacacctgggacacctggtgcaccaggactgaaaggagattatggtccccca
ggctttccgggtactccaggaaatccaggacctagcggcctaaaaggagatactggacct
caaggtgttcctggattcccaggacctaaaggacagcctggccttcctggatctaatggc
atcccaggagaacgtggtgaatctggaacaccaggttctcctggtgagccaggctttgct
ccagacccaattcttttgaagggggagcgtggttcaccaggaccacctggtatcccaggc
agcagaggcccaacaggtcccttgggattgcagggtcttccaggttcacctggtgacccc
ggagacccaggtccaatgggacctccaggatttaccggctcaccaggacggaagggagat
acaggaccagctggacaaccaggtcagcgtggttaccccggccctccaggtccagaaggg
attcagggccctccaggtatcgctggatcatcgtctgccgcacacggttttctgatcaca
cgccacagtcagaccacagaggtgccatcgtgtcctggagatacaagtctcatctatgac
ggctactctttactctatgtgcaaggcaacgagagggcgcatggacaggacctgggtacg
gctggtagttgtctacgtcgtttcagcacgatgcctttcatgttctgcaacatcaacaat
gtctgcaactttgcttcccgcaatgactactcctattggctgtccacaccacagcccatg
cccatgaacatggcgcctatcactggagagagcatcaaacctttcatcagtcggtgctct
gtatgcgaagctccagccatggtgattgctatacacagccagaccattcaggtgccatcc
tgcccgaacgactggtctgtgctctggatcggttactccttcatgatgcacaccagtgca
ggtgctgagggctcaggtcaggctcttgcctctcccggttcctgtctggaggagttccgc
tcgtctccgttcatcgagtgccacggtcgaggcacctgcaattattacagcaactcgtac
agcttctggctggccactgtggatgtgaatgaaatgttcagaaagccgcagtcagagaca
ctgaaagctggaaacttgcagacccgtgtgagccgctgtattgtgtgtatgaagaggacg
taa

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