Onychostoma macrolepis: 131543567
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Entry
131543567 CDS
T09350
Symbol
acana
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131543567 (acana)
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131543567 (acana)
04091 Lectins [BR:
omc04091
]
131543567 (acana)
Proteoglycans [BR:
omc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
131543567 (acana)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
131543567 (acana)
Lectins [BR:
omc04091
]
C-Type lectins
Lecticans
131543567 (acana)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
Sushi
EGF_TEN
V-set
hEGF
EGF_3
I-set
Motif
Other DBs
NCBI-GeneID:
131543567
NCBI-ProteinID:
XP_058637022
LinkDB
All DBs
Position
07:complement(19312498..19330597)
Genome browser
AA seq
1621 aa
AA seq
DB search
MLSLLLLSMCFWVFSATASFNHVYTEPESTLSVSIPNELPLRPLMGDTLVLPCYFQDNTV
NDPGAPTIGPLSHRIKWSLVTKEKTTNILVASEGVVSIDKGYLDRITMVGYPMTPTDASI
KITELHSNDSGVYRCEVMNGIEDDYDIVDVQVQGIVFHYRAITTRYTLTFEKAKAACIQN
SAVIATPEQLQAAYDEGLHQCDAGWLADQTVRYPIHDPREACYGDKYEFPGVRTYGVRDV
NETYDVYCFAEKMTGKVFHTTSPNKFTFEEAEPDCAKLGAKLATTGQLYLAWKGGMDICN
AGWLADRSVRYPINIARPQCGGGLLGVRTVYRFPNQTGYPLLDSRYDAFCYSETGEEGSG
LFPFDIETTTEAESGVLSVDTFTESPQVFLKPTSTGSESQGNVVTYKPSVTTSVEFPYTA
LNNSQLPLSPPPSSVDTVEGVTDRSDLSSDLNETETIMSATGVVFHYRASSGRYAFDFVE
AQLACQSIGAVIASAQQLQAAFESGYHQCDAGWLLDQTVRYPIVSPREKCSGDLEHVPGV
RSYGLRSADERYDVYCYVDKLRGEVFQASSFEGFTYGEAVAYCQGRNASLASTGDLYAAW
KQGFDKCRAGWLLDRSVRYSINNPRQQCGGGKAGVHTVYKFPNQTGSPDMHSKFDAYCIK
VDLDLSLNESETNMTVTEEKIVSVTFLPALLKPEGATPIAIAAEPSGSGASGASGTDDQL
SSGSGDQPSGSPASSGDSSGASGTDDLLSSGSGDQPSGSPVSSGDSSGASGTDSLSGSGR
DQLSGSFVSSGDSSGASGTDSLSGSGSGDQPSGSFGSSGDSSGASGTDSLSGSGSGDQLS
GSFVSSGDSSGASGTDSLSGSGSGDQPSGSFGSSGDSSGGSWSGDLPSGSGGSSGTGSGL
DILVTFSGSDSVFSGVGSASGRPEEAGKAGTEIFTFPFGQGSGLFGLDTSGSGSGSGSGY
SSEESGSTSDFSSSSVESDESGDLSGISSGSGSAEESSGFSGFPSGIFPSGGSSGISFID
GSGDIMVDSPWVKVSTAPHLTVQELGGSHVDFSGSGHISGSGMSIDVSGMSDDISGMSGD
VSGMSGDVSGMSGDVSGMSGDVSGMSGDVSGMSGDISGMSGDISEVSGVHSGSGSGLEFS
GLTFLGSGFIDLTEQPREQEASGLLLFGSGDGSGFTSGGYAIESGERSGESASGDIIFFT
SNGLVEMSNKPFQGMELGRGEVEYSGTLRLSSGSGEDQSAFASGQEHEWIPVTEVTPAVN
SSDAPSDVLSAQGPSGLYSDAAEPPLTPLSEPEGITSKLDTVTSAALSSTTEPTSLLSPS
VTEGLVVNASVNPCEPNPCGAGVCSVKDGVGICHCPPGLHGEECKFEVDVCHSNPCANGA
TCVEVEDTFKCLCLPSYEGDRCEIDVHSCEEGWTKFQGNCYLHFSERRTWQDAEQRCRDL
NAHLVSIITPEEQAFINSYTQDYQWIGLNDKMVENDFRWSDGTPLQYENWRPNQPDNYFN
SGEDCVVMIWHENGQWNDVPCNYHLPFTCKTGPVTCDQPPKVENARMFGNKKDRYQVNSI
IRYQCSENFTQRHLPVIRCMADGQWEKPQVQCIAKVKSGLQKESSGHHSHKSNTTTLEKH
L
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttgcttttgctgagtatgtgtttctgggtcttctcggccacagcatctttc
aatcatgtttacactgagcctgaaagcacactgagcgtcagcatacccaatgagcttcct
ctccggcctctgatgggtgacacattagttctgccctgctacttccaggacaacacagtc
aatgaccctggtgcccccaccattggccctttgtctcaccggatcaaatggagtctggtc
accaaagaaaagaccacaaacatcttagtggcatctgaaggagtagtaagcatcgacaaa
gggtatcttgatcggatcaccatggttggataccccatgacacccacagacgcctccatt
aagatcactgagctccattccaatgactctggagtgtaccgctgcgaggtcatgaatggg
atagaggacgattatgatattgttgacgttcaagttcaaggtattgttttccactatcgt
gccatcaccacacgatatacccttacctttgagaaggccaaggcagcctgtattcaaaac
agtgcagtgattgctactccagagcaactccaagcagcttatgatgagggtttacaccag
tgtgatgctggctggcttgcagatcaaaccgtcaggtaccctattcatgatcctcgtgag
gcttgttatggagacaagtatgaatttccaggagtgaggacatatggagtaagagacgtg
aatgagacgtatgacgtgtactgctttgctgagaaaatgacaggaaaagtgttccacact
acttcccctaacaaattcacttttgaggaggcagaacctgactgtgcaaagctgggtgcc
aagttggccaccacaggacagctgtacctggcatggaagggtggtatggatatttgtaat
gcaggctggctggcagaccggagcgttcgctaccccatcaacatcgcccgaccgcagtgt
ggaggtggcctgctgggagtgcgcaccgtctatcggtttcccaatcagacaggctaccct
ctcttagactcccgctatgatgcattttgctactctgaaacgggagaggaaggttcaggc
ctatttccattcgacatagagacgaccacagaagctgaaagtggtgtcctgagcgtggac
acattcacagaaagcccccaggtctttttaaagcccacctccacaggaagtgaatctcag
ggaaacgttgtaacatacaagccatcagtgaccacaagtgtcgagttcccatatactgca
ctaaataattcccagctgcccctttcaccaccccccagctctgtggacactgtggaaggg
gtcactgataggtctgatctttcctctgatttgaatgaaaccgaaactatcatgtctgcc
acaggggtggtcttccattatcgtgcaagctccggtcgttatgcttttgactttgtcgag
gctcaactggcatgtcagagcatcggtgcagtcattgccagtgcccagcaactgcaggca
gcctttgagtctggttaccatcaatgtgacgctggctggctgttagatcagactgtcagg
tatcccattgtgtctccacgtgagaaatgctctggtgatttggagcatgttcctggtgtg
aggtcttatggactgcgttctgctgatgaacgctatgatgtgtactgctatgtggacaaa
ttacggggggaagttttccaagctagttcattcgagggattcacttatggtgaggcagtg
gcttactgccagggaaggaatgcctccctggcctccacaggagacctgtatgccgcttgg
aagcagggctttgataagtgccgtgctggctggcttcttgaccgcagtgtacgttactcc
atcaataaccctcggcagcagtgtggtggagggaaggctggagttcacacagtttacaag
tttcctaaccaaactggctctcctgacatgcactccaaatttgatgcatactgcatcaag
gtggatctggatctgtctctgaatgaaagtgaaacaaatatgacggtgacagaggaaaag
atagtgagcgtgacattcctccctgctcttctcaaacctgaaggagctactcctattgct
atcgctgcggaaccctctggatctggcgcatctggggccagtggcactgatgatcagttg
agcagtgggagcggggatcagccaagtgggtcacctgcttcaagtggagactcttctggg
gctagcggcaccgatgatctgttaagcagtggaagcggggatcagccgagtgggtcacct
gtttcaagtggggactcttctggggccagtggcactgacagtctgtcgggcagtgggcgg
gaccaactgagtggatcatttgtgtcaagcggagactcttctggggccagtggcactgac
agtctgtcgggcagtggaagtggggatcagccgagtgggtcatttgggtcaagtggagac
tcttctggggccagtggcactgacagtctgtcgggcagtggaagcggggaccaactgagt
ggatcatttgtgtcaagcggagactcttctggggccagtggcactgacagtctgtcgggc
agtggaagtggggatcagccgagtgggtcatttgggtcaagtggagactcctctgggggc
agttggagtggggatctgccaagcgggtctggaggttcttcaggaactggcagtggctta
gatatcctagtgaccttttcaggaagtgactccgttttttcaggagttggatcagcttca
ggaagacccgaagaggctgggaaggcaggcacagagatcttcacctttccctttggccag
ggctcaggtctcttcggactggacacctctggatcaggatcaggaagtgggtcagggtat
agctctgaagagagtggatctacctcagacttttccagcagctcagtagaaagcgacgag
agtggagacctttctggcatctcctcaggatcaggttctgctgaggagtcctcaggattc
agcggtttcccatcaggaatttttccctctggaggatccagtggcatttcattcatcgat
ggcagtggtgacatcatggtggatagcccatgggtgaaggtgtccactgctccacattta
acagtacaagagctgggtggaagccatgtggatttcagcggatcaggacatatctcaggg
tctgggatgagcattgatgtctctgggatgagcgatgatatctctgggatgagtggtgat
gtctctgggatgagtggtgatgtctctgggatgagtggtgatgtctctgggatgagtggt
gatgtctctgggatgagtggtgatgtctctgggatgagtggtgatatctctgggatgagt
ggtgatatctctgaagttagcggtgtccacagtggctccgggagtggtttagagttttct
ggtctgacatttctggggtcgggcttcattgatctcacagaacaacctcgtgagcaggaa
gcttctggacttttgctgtttgggtctggtgacggaagtggatttacatctggaggctat
gccattgaatcaggggaaagatcaggggaatcagctagcggtgatataatcttcttcacc
agtaatggcctggtggaaatgtccaacaagcccttccaaggcatggagctaggaagggga
gaggtggagtacagtggcaccctcaggttgtcctcagggagtggagaagaccaaagtgcc
tttgctagtggacaagaacatgaatggatcccagtcactgaagttacgccagcagtgaac
tccagtgatgctccctcagatgtactatctgctcaagggccatctggcctgtacagcgat
gctgcagaacctccattgactccattgtcagaaccagagggaatcacaagtaaacttgac
actgttacttcagcagctttgtcttctaccacagaacctacttctttactgagcccttct
gtcacggaagggcttgttgtgaatgcttctgttaacccatgtgaaccaaacccttgtgga
gctggggtgtgttcggtgaaggatggggtgggcatttgtcactgcccacctggactgcat
ggagaagagtgcaagtttgaggttgatgtttgccattcaaacccttgcgccaatggagcc
acctgtgtggaggtggaggacactttcaaatgcttatgtctgcccagctacgaaggagac
cgctgtgagattgatgtgcacagctgtgaggagggctggactaagtttcagggcaactgt
tacttgcatttctcggagaggaggacctggcaggatgctgagcagcgctgtcgagactta
aacgctcacctggtgagcattatcactccagaggagcaggccttcatcaactcatacacg
caagactatcagtggattggactgaacgataaaatggtggaaaatgacttccgctggtca
gatgggactccgctgcaatatgagaactggaggcctaaccagcctgacaattattttaac
tctggtgaagactgtgttgtaatgatctggcatgaaaatggtcaatggaatgatgtgccc
tgcaactatcacttacctttcacatgcaaaacaggtccagtgacatgtgaccaacctcct
aaagtggagaatgccaggatgtttggcaacaagaaggatcgttaccaggtgaattctata
atcagataccagtgcagtgaaaacttcacacagcgccacctacctgtgatccgctgcatg
gcagacgggcagtgggagaagcctcaagtgcaatgcatagccaaggtcaaatctggactg
caaaaagaatcttctggtcatcactctcataaatctaatacaacaacattggaaaaacat
ctctaa
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