Onychostoma macrolepis: 131543719
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Entry
131543719 CDS
T09350
Symbol
dhx15
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131543719 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131543719 (dhx15)
03009 Ribosome biogenesis [BR:
omc03009
]
131543719 (dhx15)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131543719 (dhx15)
Spliceosome [BR:
omc03041
]
Complex A
U2 snRNP components
U2 related factors
131543719 (dhx15)
Complex B
131543719 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
131543719 (dhx15)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
90S particles
Helicases
131543719 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
AAA_25
Cas3-like_C_2
SRP54
Flavi_DEAD
Atrophin-1
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
131543719
NCBI-ProteinID:
XP_058637412
LinkDB
All DBs
Position
07:4586677..4625253
Genome browser
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRERDRDDRSKDRDRDRDRDRDRDRDRDRDSKVPAA
SISSGVPSGGMLTLKQTAMNQQINPFTNLPHTPRFYEILKKRLQLPVWEYKERFNDILNR
HQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCDFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHEAVQWCYDNFVNYRSLMSADNXRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKVAPQYYEMGNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggcatcggttggatttaggtgatgattattcgtcgagcaagaagaggtca
tctgacggtaaggaccgtgagagagatcgggacgaccggtcgaaggatcgagatcgagac
cgtgacagagaccgagaccgcgatcgagaccgggatagagacagcaaggtgcccgccgcg
tccatcagctccggcgtgcccagcggcgggatgctcacgctgaagcagacggccatgaat
cagcagatcaaccccttcaccaacctgcctcacactccgcgcttttacgagatcctcaag
aagaggctgcagctgcccgtctgggagtacaaggaacgttttaatgacatcctcaaccgg
catcagagctttgtgctcgttggagagacgggctctggaaagaccacacagatccctcag
tggtgtgtggacatggtgagggcccttcccggccctaagcgcggtgtggcttgtacgcag
ccacgtagggtggcagccatgagtgtggctcagagagtggcagatgaaatggacgtcatg
ctgggccaggaggtcggatactccatcagatttgaggactgtagctctgcaaagaccata
ctgaaatatatgacagacggtatgttactccgcgaggctatgaacgacccgctgctggag
cgatacggtgtcattattctcgatgaggctcacgagcgtacgttagccacagatattctg
atgggcgtcctcaaagaagtggtccgtcagagatccgaccttaaggtcatcgtaatgagc
gccacgctggacgctggaaagttccagatttatttcgacaactgccctttgctgaccatt
cccggccggacgcatcccgtggagatcttctacacgcccgagccggagagggactacctg
gaagcggccattcgcacggtcatccagatccacatgtgtgaggaagatgagggagatgtg
ctgctcttcctcaccggacaggaggaaatcgacgaagcctgcaaacggatcaaacgtgag
atcgatgatctcggccctgaggttggcgacatcaaaatcatcccgctctactccacgctg
ccaccacagcaacagcagaggatcttcgagccacctccaccccgcaaacccagcggagcc
atcggcaggaaggttgtggtttctacaaacatcgctgagacgtccctgaccatcgatggc
gtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcattcga
gtcgagtctctgctcgtaacggctattagtaaggcttcggcccagcagagagccggtcgt
gctggacgtactcgcccaggaaagtgcttccggctctacaccgagaaggcctacaagact
gagatgcaggacaacacataccctgagattctcaggtcgaatttgggctctgtggtgcta
cagctcaagaagcttggtatcgatgacctagtgcactttgacttcatggacccaccagct
cctgagaccctgatgcgagccctggagctgttgaactatctggcggcgctgaatgacgac
ggtgacctgacggagctgggctccatgatggctgagttccctctcgacccccagctggcc
aagatggtcatcgccagctgcgacttcaactgctccaatgagatcctgtccatcaccgca
atgctatcagtcccacagtgctttgtgcggcccaccgaagctaagaaggcagccgacgag
tccaaaatgaggttcgcccacatcgacggggaccacctgaccttgctcaacgtctaccac
gccttcaaacagaaccacgaggcggtgcagtggtgctatgataacttcgttaactaccgc
tcgctgatgtcggctgataatnngcggcagcagctctcacgtatcatggaccgcttcaac
ctgccgcgacgcagcacagagttcaccagccgagactattacatcaacatccgccgcgct
ctcgtcacaggcttcttcatgcaggttgctcacctggagcgcaccggccactatctcaca
gtgaaggacaaccaggtggtccagttgcacccttccactgtactggaccacaagcccgag
tgggttctctataacgagtttgtgctgaccaccaagaactacatccgcacctgcactgat
atcaagcccgaatggctggtgaaagtcgcccctcagtactacgaaatgggcaacttccct
caatgcgaggctaagaggcaactggagcgcatcattgctaaacttcaaaccaaggagtat
tctcaatactaa
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