Onychostoma macrolepis: 131543809
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Entry
131543809 CDS
T09350
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
omc
Onychostoma macrolepis
Pathway
omc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131543809 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131543809 (sox17)
Transcription factors [BR:
omc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131543809 (sox17)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox17_18_mid
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
131543809
NCBI-ProteinID:
XP_058637590
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Position
07:complement(11728516..11734115)
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AA seq
434 aa
AA seq
DB search
MSSPDAGYASDDPSQTRGTSSVLMSGMRQCAWVDPLSPLSDTKAKHETCSSAGLGRGKSE
PRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPIVDKRPFVEEAERLR
VKHMQDHPNYKYRPRRRKQVKRNKRLDSSFVLHGVGDAQNPLGMEGMSVGYSELPQARLL
PYCETQTLFEPYSLPTPDPSPMDAGTTEFFVHLLDNHHQSAYSYHNHQEHHFQENTNILT
NMHGHTNMKSLTDTHFHSITHCNINTHTNPNSHTSSNTQFNLMSNAHPQQTLNESTKPQT
SHSSSTHLNSLTHPISHTIFNKSSSSQQAMPPDYLNCPSTLDDHYSSNSQLKHPYEELSL
PVDRHTYKHSIPEPHSQIPAAAQNQDSSEMVDEVKFEQCLAYGVPHVPLQGSNLISTVLS
DASTAVYYCGYSNS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggttacgccagtgacgacccgagccagacccgaggcaccagc
tcagtcttgatgtctggcatgaggcagtgcgcgtgggtggacccgctcagtccgctttct
gacacgaaagcaaaacacgagacatgttcttcagcgggtctcgggcgcggaaagagcgag
ccgcgcatccgcaggccgatgaacgcatttatggtgtgggcgaaagatgaacgcaagagg
cttgcgcagcaaaacccagatctacacaatgcagagctgagtaaaatgcttggtaagtca
tggaaagctttgccaatagtggacaaacgtccatttgttgaggaggcggaacgtctccga
gtgaaacatatgcaagaccacccaaactacaaatatcggccacggcgtcgtaaacaggtg
aaacgaaataaacgactggactccagctttgtgcttcatggggtgggggatgctcagaac
cctctgggcatggagggcatgagtgttggatattcagaactgcctcaagctaggctgctt
ccatactgtgagacccagactttgtttgagccctacagcttgcctacacccgacccctct
cctatggacgctgggacgactgagttttttgtccatcttctggacaatcaccatcagtca
gcatacagctaccataaccaccaagagcaccactttcaggaaaacacaaacattctcacc
aacatgcatggtcatactaacatgaaatcactcacagacacacattttcacagcattact
cactgcaacatcaacacacacaccaatcctaactcacacacttccagcaatacacagttc
aatctaatgagcaatgctcacccacagcaaactcttaatgagagtaccaaaccacaaacc
agtcacagttctagtactcatcttaattccctcacccacccgatatctcacaccatcttt
aacaaaagctcttcttctcaacaagccatgcctcctgattacctgaactgtccttcaact
ttagatgaccattatagttccaactctcagttgaagcatccttatgaggaactgtcactt
cctgttgaccgtcacacatataagcacagcattcctgagccacactcacagatccctgcg
gcagctcagaatcaagattctagtgaaatggtggatgaagtgaagtttgagcaatgcctc
gcttatggggtcccccatgtacctttgcagggttccaacctaatctcaactgtactgtct
gatgctagcactgctgtgtactactgtggctatagtaattcctga
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