Onychostoma macrolepis: 131544007
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Entry
131544007 CDS
T09350
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131544007 (lingo1b)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
131544007 (lingo1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_Zer-1
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
131544007
NCBI-ProteinID:
XP_058637861
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Position
07:complement(19447300..19471427)
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTIKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAANAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPND
NGANGTGATNPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGESSPNEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtctggctct
gccactggctgcccctctcgctgcgagtgcagtgcccaagagcgctcggtcgtgtgccat
cggcggaagctgatcgccctccccgagggaattcccactgacacgcgactgttagatctc
agcaagaaccgcctgaaagccatcaacccggaagaattcctcaactatcaacacctggag
gagctacagctcaacgagaacatcatttccgtcattgaaccaggggccttcagcaacctc
cttggcttgcgaatactggggctacgcaacaacaagctgaagttgattcagctgggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaattgtcattttg
ttggactacatgtttcaagatctctacaacctgaaagaactggaggtgggggacaatgac
ctggtgttcatctctcacagagcttttcatggcctcagcagcctagagcaactcactatg
gaaagatgcaacttgacctctgtgccaacagaggcattcagtcatcttcacaacctgctg
accctcaggctgcggcatctcaacatcaacatcattcgagacttttccttcaggaggctc
tatcgactcaaagtattagagatagcaaactggcctcttttagaaaccttgaccataaag
tccctccatggacttaatatcacaaccttgagcatcacaaactgcaatctcactgctgtc
ccttacgaggccattcagcacctggtgtaccttcgatttttcaacctgtccttcaatccg
atcgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gtagggggccggctagtcagcattgagccttattccttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggagtctgccttccactcggtc
ggcaacctggagacactggctcttcacgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgtcgatggcgtcttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctcccaccaaattat
ttcacctgtcagaaatccaagatccgggatcacaaagccattcatagatttgtggatgag
gggaccactgtccaattcccttgccaagcagatggagaccccgctcccatgattatgtgg
cagtctccaaaaaagcaattcatcactactaaaagcatcggacggctgtcagtgtctccg
gatggcaccctagaggttagatacgcccaaatacaagacaatggcacatacacctgcatt
gccgccaatgcaggaggaaacgacacccgtttggctcacctacacgttcatagctactct
cccaattggccccatcagcccaataagacctttgccttcatctcgaaccagcccaatgat
aacggtgccaatggaactggtgcaacgaatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctgggagtggtgctgttctgcctggtgctc
ttgttcctctggagccgagggaaaggcaatgccaagccaaacatcgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccgaacgagggatctcacaagatcagtatgaag
atgatttaa
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