Onychostoma macrolepis: 131544892
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Entry
131544892 CDS
T09350
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omc
Onychostoma macrolepis
Pathway
omc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131544892 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131544892 (smarcd3b)
03036 Chromosome and associated proteins [BR:
omc03036
]
131544892 (smarcd3b)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131544892 (smarcd3b)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131544892 (smarcd3b)
PBAF complex
131544892 (smarcd3b)
GBAF(ncBAF) complex
131544892 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131544892
NCBI-ProteinID:
XP_058639362
LinkDB
All DBs
Position
07:23621818..23660554
Genome browser
AA seq
507 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
TNQAMEASRKRPAPSQQQIQQQQAVQNRNRKKPVGFPGPNEMPGRQMDMREAQSDPTLGS
NAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRK
LRLYISNTFNPAKPDAEDSEGSIACWELRVEGKLLDDPGKMKRKFSSFFKSLVIELDKDL
YGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIH
TQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPP
DPIVINHMISVDANDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETI
ESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHQPWSQ
EAVSRYFYCKIQQKRQELEQALALRNT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagaccgctggaggagctcgcaaagccaccaagagcaaactatttgag
ttcctcgtccatggagtgcggcccggtatgccatcaggagcaagaatgcctcatcagggg
gccccaatggggcctccaggaccaccatatggaggaagccctgctgtccggcccggactc
accaatcaggcaatggaagccagtcgtaaacggcccgctccttcacagcagcagatacaa
cagcagcaggccgtacagaatcgaaacaggaagaagcctgttggatttcctggaccaaat
gagatgccagggagacagatggacatgagagaggcccaatcagatcccacactcggatca
aatgccaagaggaggaagatggctgataagatccttccacaaaggattcgtgagcttgtt
ccggagtcacaggcatatatggatctgttagcattcgagcgcaaattagaccagaccata
atgcgcaaacgggtggacatccaagaggcacttaagagacccatgaagcaaaagcgaaaa
ctgcgtctctacatctccaacacgtttaaccctgccaagcccgatgcagaggactctgag
ggaagcattgcatgctgggagctacgtgtggagggcaaactgctggatgatccaggaaag
atgaagaggaagttctcctcattcttcaagagtctggtgattgagctggacaaagacctt
tacggccctgataaccatttggttgagtggcatcgtaccgcaaccactcaggagacagac
ggtttccaggtgaagaggcctggagatgtgaacgtgcgctgcaccctgctgttaatgctg
gattaccagccgcctcagtttaaactggatccgcgtctggctcgtctgctgggaatacac
acacagactcgctccagtatcatccaggccctctggcagtatgtcaaaaccaataaactg
caggactcacatgacaaggagtacatcaactgtgacaagtacttccaacagatctttgac
tgtccacgtctgaagttctctgaaattccacagcgcctcaccaaccttttacttcccccc
gaccctattgtcatcaatcacatgattagcgtcgacgctaatgatcagaaaaagacagcg
tgctatgacattgatgtagaggttgaagatccccttaaagcacaaatgagcagcttcttg
ctctccacagccaatcagcaagagattgcctctctggacaacaagatccacgagactatt
gagtccatcaatcagctgaagatccagagagatttcatgctaagcttctccagagatccc
aaaggctacatccaggactggctcaaatcccagagcagagatctgaagctgatgacagat
gttgttgggaacccagaggaagagaggagagcagagttttatcatcagccttggtctcag
gaggctgttagccgttacttctactgcaagattcagcagaagaggcaggagctggagcag
gccttggccttgaggaacacctag
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