Onychostoma macrolepis: 131545295
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Entry
131545295 CDS
T09350
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131545295 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131545295 (polb)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131545295 (polb)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
131545295 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
131545295 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
131545295
NCBI-ProteinID:
XP_058639959
LinkDB
All DBs
Position
08:complement(27164411..27168907)
Genome browser
AA seq
337 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLVELANYERNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFYDEGVR
NLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQKMEALILKELDVVDPEYIGTICGS
YRRGAQSSGDIDILLTHPDYTSQSEKQPRLLHAVVDHLESIGFITDTLSKGDTKFMGVCQ
LQKEEEDEEEESFHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTI
RPLGVTGVAGEPLMVDSEKDIFDYIQWKYREPKERSE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagaaaagcgccacaggaaactctgaacgaaggaatcacagattttctcgtc
gaattggcaaattatgagagaaatgtcaacagagccatccataaatacaatgcttacaga
aaagcagcatctgtgatcgccaaataccctcaaaagatcaaaagtgggacagaagcaaag
aaactggatggagttggtgcaaagatagcagagaaaatcgatgagtttttatcgacagga
aaactgcgcaagctggaaaagattcgcaatgacgacacaagctcctccatcaacttctta
acccgagtgactgggatcggtcctgctgcggccaggaagttttatgatgaaggcgtcagg
aacttagaagatctgaagaagatcgagcacaaactcaaccaccatcagcagatcgggtta
aagtactttgaagaatttgagaagagaatccctcgtgcagaaatgcagaaaatggaggct
ctgatactgaaggaactggatgtggtggatcccgagtacatcggcaccatctgcggcagc
tacagaagaggagcacagtcgagtggtgatattgatatactgctgacccatccggactac
acctctcagtctgagaaacagcccagactccttcatgctgtcgtggatcatctggagtcc
atcggcttcattaccgacacgctttctaaaggagacactaagttcatgggtgtgtgtcag
ctgcagaaagaagaggaagatgaagaagaagagtcttttcaccgccgtattgacatcagg
cttattccaaaggatcagtattactgcggtgtgctgtacttcaccggcagtgatatattc
aacaagaacatgaggacccacgcgctggagaagggcttcactctcaacgaatacaccatc
cgtccgctgggcgtcaccggtgtggctggagagcctctgatggtggacagcgagaaggac
atctttgactacatccagtggaaatacagggaaccaaaggagcgcagcgagtga
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integrated database retrieval system