Onychostoma macrolepis: 131545389
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Entry
131545389 CDS
T09350
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
omc
Onychostoma macrolepis
Pathway
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
131545389 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131545389 (xpc)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131545389 (xpc)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
131545389
NCBI-ProteinID:
XP_058640134
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Position
08:complement(15036140..15048851)
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AA seq
879 aa
AA seq
DB search
MAKKKETQQKIGTKKPRQIAKNKPASKTRKTKENTMVDKNNRRNSRVASRASRKVRDSSD
ERTSKYFQDSEVKTEEPEEMSDHSEEMSPMLSEHSSPSKQVKEEEEESEDEEDWEEVEEM
AEPLGSVDSTELAVVSKPVEIEIETPDMTRKRQRKEKRKAEFETYLRRMMKRFNMELLVN
THKVHLLCLLAAGLFRSRLCCEPDLLAVALSILPAHFTTVATKRINNGFLEGLLKWFQMT
FTLNPALPEEKGVELRTVLEKRIGCLSARDHEEMTNLFLLVLRSLRLFCRLVLSLQPLPL
KPPPASENKTTPTKSSAGKDQSEKPSPGPKISPGNKRPSSAQNAAVKEERGGKRKKKKEE
GGEKEAAGGQKPKNSRRRSVASKVTYKEVSSEEEEEQSEEEFQPTNEEDSEDSGGAMKVC
RKSKVKGKGQAPRRSTEVKQEEESEEEEEEEEEEEKQVKKQRRKRKEGKGADEWLEVYLE
STGKWVCVDVDQGVGQPQLCSDQATHPITYVVGVDDEGYLKDLSSRYDPTWLTSSRRRRV
DSEWWEETMELYKSPDTERGQKEDQEMQAKLLDKPLPTSISEYKNHPLYALKRHLLKYEA
IYPSTAAVLGYCRGEPVYSRDCVHTLHSRDTWLKEARTVRLGEEPFKMVLGFSNRSRKAR
MMSEQKNVKDLPLFGVWQTEEYQPPIAVDGKVPRNEFGNVYMFKSCMLPVGCVHLRLPNL
HRVARKLNIDCATAVTGFDYHCGFAHAVNDGYIVCEEHQEILKAAWENEQDIQQKKEQEK
REKRVVANWTLLVKGLLIKERLKRRYGQQGLAAGAGLKQEKEGLSSDEEEEGGAQTAPPS
LTSSWPQNRQEEQEEKIIRRVTKREKRGEEKHLFPFEKV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaagagacacagcagaaaatcggcacaaagaaaccgaggcagattgca
aagaacaaaccagcatccaaaacacgaaaaaccaaagaaaatactatggtggacaaaaac
aaccgcagaaactccagggtggcatctcgtgcgtccagaaaggtcagggattcctctgat
gagagaacaagcaagtacttccaggacagtgaagtgaaaaccgaagagccagaggaaatg
agtgaccacagtgaggagatgagcccaatgctcagtgagcactcatcaccatcaaaacaa
gtcaaagaagaagaggaagagagtgaggatgaggaggactgggaggaagtggaagaaatg
gcagaacctctaggttctgtggactcgactgaactagcagttgtgtcaaaacctgtggag
attgagatcgagactccagacatgactcgcaagaggcagaggaaggagaaaaggaaagca
gagtttgaaacttaccttcgtcgaatgatgaaacgatttaatatggaactgttggtgaat
acccacaaggtccaccttctttgcttgttggccgctggtttgttccgaagcaggctgtgc
tgtgagcctgacctgttggctgttgctttgtcaatactgcctgcccactttaccacagtt
gccacaaaacgcataaacaatggcttcctggaggggcttctcaaatggtttcaaatgaca
ttcacattaaaccctgccttacctgaggagaagggggtggagttgaggacggtgctggaa
aagcgaattggctgtttatcagcaagggaccatgaggagatgaccaatctgttcttattg
gtgttgcggtcattgcgactcttctgtcgattggttctgtcactgcaaccccttcctctg
aagccaccacctgccagcgagaacaagaccacacctaccaagagctctgcaggaaaagat
cagtctgagaaaccctccccaggacctaagatatctcctggaaacaaacgtccatcatca
gcccaaaatgctgccgtaaaagaggaaagaggtggaaagagaaagaaaaagaaagaggaa
ggaggagagaaagaggcagcagggggacagaaacccaaaaacagcagaagaagaagtgta
gcttcaaaagtgacatacaaagaagtcagcagcgaggaggaggaggagcagagtgaggaa
gagtttcaaccaaccaatgaggaagacagtgaagactctggcggggccatgaaagtatgc
agaaagtcgaaggtgaaaggaaaaggtcaggctcctcggaggtcgaccgaggtcaaacag
gaggaggaaagcgaagaggaagaagaggaggaggaagaggaagagaaacaggtgaagaaa
caacgacgtaaaagaaaggaggggaaaggggcagatgagtggttggaggtttatttggaa
agtacggggaagtgggtgtgtgttgatgtggatcaaggtgttggccagccgcagctctgc
tccgatcaggccactcacccaatcacttacgtggtgggcgttgatgacgaagggtacctg
aaagatcttagcagcaggtatgaccccacatggctgacatcatcacgcagacgacgagtg
gactcagaatggtgggaggagactatggagctctacaagtctccagatactgaaagagga
cagaaggaggatcaggagatgcaggcaaagttattggacaagccattgccgacatccatc
tcagaatacaagaaccatccgctgtacgcactaaagaggcacctgctaaaatatgaggcc
atctacccctctacagccgctgtcctggggtactgcagaggagagccagtttattcacga
gactgtgtgcacacgctccattctagagatacctggctgaaggaagcaagaaccgttcga
ctaggagaggagccgttcaagatggtgcttggtttttccaaccgttctcgtaaagccagg
atgatgtctgagcagaaaaatgtcaaagatctgcctctctttggagtctggcaaactgaa
gagtaccagcctccgatcgccgttgatggcaaagtaccacgtaatgagttcgggaatgtg
tacatgtttaagtcatgcatgttaccagtaggatgtgttcacctgcgtttgccaaatctg
cacagagtggctcgtaaactgaacatagactgtgctacagcagtgactggttttgattac
cattgtggatttgcacatgcagttaacgatggctatattgtctgtgaggaacaccaagaa
atcctgaaagcagcctgggaaaatgagcaagatatccagcaaaagaaagaacaagagaaa
cgtgagaagcgtgtggtggctaactggacactactggtcaaaggcctgttgataaaagag
aggctgaagcgtcgctatgggcagcaggggctggcagcaggggcggggcttaagcaagaa
aaagaaggactgtcctcagatgaggaggaagagggcggggctcagacagctcctccctct
ctgactagttcatggccgcagaacaggcaagaggaacaagaggaaaagatcataaggcgt
gtaactaaacgagagaaacgtggagaggagaaacatcttttcccctttgaaaaagtttga
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