Onychostoma macrolepis: 131545438
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Entry
131545438 CDS
T09350
Name
(RefSeq) nephrocystin-4-like isoform X1
KO
K16478
nephrocystin-4
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omc03037
]
131545438
Cilium and associated proteins [BR:
omc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
131545438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPCD
Motif
Other DBs
NCBI-GeneID:
131545438
NCBI-ProteinID:
XP_058640232
LinkDB
All DBs
Position
08:17166443..17338000
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AA seq
1427 aa
AA seq
DB search
MSDWKNAFLRNRMIPPHSQTARQAPGSSQGLQLVFKQIDGLHVKQLESPPSLQYQLRVTL
FDSGHQHFFGRTWKSGSHSVSGTQGQSGRVLLNEVVYFHTSLCLSSVVAVVELVSLSTRA
DGSQDAVGSGFGLLQLFTGRADTSISQGEGRLSLFNGTPRALLHPTLKDPLQLNAVLSVM
EDSQLLYSIQPHPALTPIIHLLPPNILVSGHDSIPGVVSCTDTGTADALRKPRLLKSFSC
VLEGLRVALFPSVEVFESDLLQLLNRDCQNTNRGAEGRSVVVQERRLLVGVHNGWGWVEK
PHVLVLEREAGGSEAARARGASAGSSFRQTSTDKLSDGLSLRGSVELKMMRDVAFSIVFQ
LQYVFSCPLAGDGRMTSTAVPRAAFMQCVRWCAWSLFSDPGGPGENVCLHLQGGALPNPW
GVMVYSASTQQTNSGKCVIKFKFSSSVEGASCSTALKVSHRETSPPKKLLSAYQDERILE
PTVSTLQSPRGPALSLSQLVATSRYPTMSHTVGSPWQQQLPSLLSPSPMASAHQLSHVER
PVAGSIAHLELSVQEREGNRSEEEDEMQELTFTPVHAPVITLGTQAAGSSRSTSRRSLAQ
LFSSGFPQILDNQNQVAEVLDPSEPVNFNPQREEADPLQANTLILQFLAFTRVPQAGVNS
DWPSTVHFTFQLYRFPPVTTERLKLLDPERNSKLKSSSDYPCVLSVINKDGTLSSGYPGL
QLQYRVDPQFLKPGERGWFLRYLALHSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQ
VNHELEVITTEYLQDANFASRHDNKHSATPAINVYTTVKGILHLRLGNVGGSVTNSQSSL
ALPPSLSHVVQPSDAPQGFAGGGVPALTVLQLNASNARRARRLPEIDSELARLLQSTMRE
VGGAALHQQAEAKEVRQRKIDRMAAVRQNEEQKATPPFLNSSNITRHRAERVQHSRDLRV
IEAYRERCKAQEITNMLSQAITTKHTLYATLGTAEFFEFVLKNPFNVPQTVTIECDDPEL
SVIVKTEEWKYFKELTKTLTPLEEEMFHLKESTLTPQVYLRPKESVHVPFKYQTFICGHT
FPLQDTKSLKTSRSPQMAQKHLSNTIHAKSIKVLFRGEDRKALAICQVDVEPTPHVVDQT
FRFYQPELTFLKKAIRLPAAWDDTADGSATLHVRCSDPNVICHTTNLTPGEPQDVYLKVS
GSPSPQIRKFFIKIFTDPWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVLHGTQAIR
RVKCYTSHPLELQVDPGEVFALPAQGVQDVCVGLRALRPGSRFFYLNVVDVDTRQLVASW
LLCITCRQPVISKAFEISVPVDGGKGSNKKISFTNPYSSSRVFNLRTDRPDLLQFKEEQF
QIGGGELYTIGLRFAPSQNPGMEEILIFINDKQDKNEDTYCVRVQYR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactggaaaaacgctttcctgagaaaccgcatgatcccgcctcacagtcaaaca
gccagacaagctccaggatcttctcaaggtctacagctggtcttcaaacagatcgatgga
cttcacgtaaaacagttagagtccccgccatcactccagtatcagctgcgagtgaccctg
tttgactcgggtcaccagcacttcttcgggcgcacatggaagagcggctcacactctgtc
agtggcacgcagggtcagagcggtcgagtgctcctcaatgaggttgtgtacttccacact
tccttgtgtttgagttctgtggtggcagtggtggagttggtgtctctgtctaccagggca
gacggttcccaggatgcagtggggtcagggtttggactcctccagctcttcacaggtcgt
gcagacaccagcatctctcagggagagggcaggttgagtctgttcaatgggacccccaga
gccctcctgcacccgacgctgaaagaccctctgcagttgaatgctgtattatcagtgatg
gaggactctcagctgctctactccatacagccacacccagctctcactcccatcattcac
ctgctccctcccaacattctggtgtctggacatgacagcatccctggtgtggtgtcgtgc
acggacacaggcacagcagatgcgctgcggaagcctcgtctgttgaagagcttctcgtgt
gtgttggagggcctacgtgtggctctcttcccctccgtggaggtcttcgaatctgacctg
ctccagctgctcaacagagactgccagaatacaaacaggggtgcggagggacgctcggtt
gtggtgcaggagcgcaggctgctggttggggtccataacggttggggttgggtggagaag
cctcatgtgttggtgctggaacgtgaggccggagggagcgaagcagccagggctcgtgga
gccagcgcaggcagcagcttcaggcagacctccacggacaaactcagtgatggactgtct
cttcgtggcagtgtggagctcaaaatgatgagggacgtggctttcagcatcgtcttccaa
ctccagtatgttttctcttgtccactggctggagatgggcggatgacatccacagctgtg
cccagagcagcgtttatgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcct
ggaggccccggagagaatgtgtgcctccacttgcagggcggtgctctccccaacccttgg
ggtgtcatggtctactctgcaagcacacagcagacaaattcgggcaaatgtgtcatcaag
ttcaagttttcatctagtgtggaaggagcttcttgcagcacggcgttgaaagtgagccac
cgggaaacatcgccacctaagaagttactttcagcataccaagacgaacgcatcttggag
ccaacggtttcaacgctgcagtctccacgcggcccagcgctgtctctctctcagctggtt
gcgacttcacgctacccgaccatgagccacacggtggggtctccatggcaacaacagctc
ccctctctgctttctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgt
ccagttgccggcagcatagctcatctggagctgagtgtgcaggagagagagggaaacaga
agtgaggaagaggatgagatgcaggagctgaccttcactccagtgcacgcccctgtcatc
accctcggaacacaagctgctggctcctccagatcgacctcccggagatctttggcccag
ctcttctcctctggttttcctcagatcctggacaatcagaaccaggttgctgaggttctg
gatccttctgagcctgtgaactttaacccccagagagaagaagcagatcctctgcaggcc
aacactctcatccttcagttccttgcttttaccagggtccctcaagctggtgtgaattca
gactggcccagcactgtccatttcaccttccagctttaccgcttcccacctgtcaccacc
gagcgtctgaagctgcttgacccggagagaaacagcaagctgaaatccagctctgattac
ccctgtgtcctctctgttatcaacaaggacggcacacttagctctggttatcctggtctg
cagttgcagtaccgagttgacccgcagttcctcaagccaggcgaacgaggctggttcctg
cgatacctggctctccactccctgcagattgatgtctgggacagtgaatccttaatgctg
attggttcagctgctgtggagctgaagcatatgctgcgtcaaggccgtgcagccgtccag
gtgaaccatgagctggaagtgatcactactgagtacctgcaggatgccaactttgccagc
aggcatgacaacaagcacagcgccactccagccatcaatgtctacactaccgtaaaagga
attctgcatctgcggcttggcaacgttggtggcagtgtgacaaattcccagagttctttg
gctcttcctccatcgctctcccatgtggtccagcccagcgatgcccctcagggttttgca
ggaggaggtgtccctgctttaacggtcctccagcttaacgcaagcaatgccagacgagcc
cgccgattgccagaaattgacagcgagctggccagactgctacaaagcaccatgagggaa
gtaggcggagctgcactgcatcagcaagccgaagcgaaagaagtacgccagaggaagatt
gacagaatggcagctgtccgtcagaacgaggagcagaaagccacgcccccttttctgaac
agctcaaacatcacgaggcatcgggcagagcgtgtgcagcattcccgtgacctgcgtgtg
attgaggcctatcgggagcgctgtaaagcacaggagatcaccaacatgctctctcaggcc
atcactaccaaacacacactatacgccacgctcggaacggcagagtttttcgaattcgtg
ctcaagaatccattcaacgttcctcagactgtcactattgaatgtgatgacccagagctc
agtgtaatcgtgaaaactgaggagtggaaatatttcaaggagttgacgaagactctgact
cctctagaggaggagatgtttcacctaaaggagagtacactgactccacaggtttacctg
cggcccaaagaaagcgtccatgtgcccttcaagtaccagaccttcatctgtggtcacacc
ttccctcttcaggatacaaaaagcttaaagacttcaagaagtccacagatggctcagaaa
catctgtccaatacaattcatgccaaatccatcaaggtgctgttccgcggggaagacaga
aaggctctggcgatctgccaggtggatgttgaacccacgccacatgtggtggaccagacc
ttccgattctaccagcctgaactcacattcctaaagaaggccattcgcctgcctgcagcc
tgggacgacacagcagatggttctgccaccctccatgtgcgctgcagcgaccccaatgtc
atctgccacaccaccaacctgactccaggagaaccacaagatgtttacttgaaagtatct
ggtagcccaagtccacagattcggaaattcttcataaaaattttcactgacccttggctg
gcctcccctgcgcagatctggcaggtatacgtgcattacctgcaaaggatggacctgagc
tgtgtgtgtggcactctgagctggcattcgctggttctgcacggcacacaagccattcgc
agggtcaagtgctacacgtcacatcccctcgagcttcaggtggatccaggtgaagttttt
gctcttcctgctcagggagttcaggatgtctgcgtgggcctgagggctctgcgccctgga
agccgtttcttttacctcaatgtagtcgacgtggacactcggcagctagttgcctcctgg
ctgctgtgcatcacatgccgacagcctgtaatctccaaggcgtttgaaatcagcgttcct
gtagatggagggaagggcagcaataagaaaatcagtttcacaaacccctactcgtcctcc
agagtattcaatctgcgcacagatcgcccagacctgcttcagtttaaagaggagcaattt
cagattgggggaggagagctctacaccatcggcctgcgttttgctccgagtcagaaccct
ggcatggaagagattctcatctttatcaatgacaaacaggataagaacgaggacacttac
tgtgttagggttcagtacagataa
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