Onychostoma macrolepis: 131545595
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Entry
131545595 CDS
T09350
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omc
Onychostoma macrolepis
Pathway
omc02010
ABC transporters
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131545595 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131545595 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omc02000
]
131545595 (abca1a)
Transporters [BR:
omc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
131545595 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
131545595
NCBI-ProteinID:
XP_058640597
LinkDB
All DBs
Position
01:complement(12623835..12661603)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQQDK
SFEGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSEFLEKNATLPKHAVRQIVDANVNLE
KVLIKGFSVHLRDLCNTTSLEEFVTIADKDVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSIATDSLLESLGALAVEFASMKSWRDMRNEILYLTGNSTQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSDPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVLRDLGGM
WEEMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTDWRVEDVSSFLSKSSEDTR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMEEDSYSLTTSISLMLFDSVLYA
LMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGITSAPTNKKENAEAVCIEEEPAHL
DPGVYIENLMKVYSNGKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLNTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLHEEKVKSEMEQIV
MDLGLPHKRKSRTNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVSYSKASLKKEDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGIIPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFIALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFISNDAPEDRHTNKLLEALMDNPAYNEKCTDEQNTASKSCLIKD
GEWMVPEVPETVQDMFVKGNWSMENPSPLCECSCEGRKKMLPECPPGAGGLPPPQIKVTT
DETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPSDDITD
AISHIRNRFSLQAGTAADRFLGSLSTFIRGLDTKNNVKIWFNNKGWHSIGGFLNVMNNAI
LRANLPPGLDRSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGLIFFCITVLIQYRFCIKARPVSTKLKPIGEEDEDVARERQRILCGGGQTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAISDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYEDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVAGADPQLE
PVMEFIERELPGSTLKERHRNMLQYQLPSSLTSLARIFSLLSKNKELLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISINKNDAIVDISHLSAFLVDEKAKETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttgggtttgctgttgtggaagaacttcacttaccgacggaga
cagactattcagctgctgatcgagatcatatggccactcttcatctttttcatcttgata
tctgtgagactccactatcctccatacgagcaacatgaatgccactttcccaacaaggcc
atgccctctgcggggactttaccatgggtgcagggcatcatctgcaatgccaacaacccc
tgctttcgctaccccacccctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcatcgatgccaagaaaattctcctctacagccaacaagacaag
agctttgaaggcttcaaaggacttgtccgggccttgagaaaactccagagaaacactgaa
gggttcaagctgaaagacttcctccgtgataatgaaacgttgtctgagtttcttgagaaa
aatgctacccttcccaagcatgctgtgagacagatagtggacgctaacgtcaacttggag
aaggtgcttattaaaggcttcagtgttcatctcagagacctgtgcaataccacatctctg
gaggagtttgtgactatagccgataaggacgtgtctcagctgacgcaaaacatcatctgt
cagtcatctgctgaatggctgaacaacgcagagagccacttcctgtctaacctggacttc
ctgaagccaatacggaaagatgtcaagtctgacccgaagattatccaagatgtgtctata
gcaacagacagtctgctggagagtctgggagcattagcggtggagtttgcgagtatgaag
agctggcgggacatgcgcaatgagatcctgtacctgacgggcaacagcacacagtccccc
aaccacatgtaccaggccgtgtcccgtatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcgggaactac
ggcaatgacagcgacagcgatcccgtctccgtttatgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagggctctg
aagccactgctcatggggaagatcttgtacaccccagacacccctgccacccagaggatc
atacaagaggtcaataagacgtttcaggagttcggtgtgctcagggaccttggcggcatg
tgggaagagatgagacccaaaatctggaacttcatggagaacagtgaggagatggacctc
gttcggacgctcctccagaacaacgctagtgctcgcttctttaatgccaagctgagcggg
acggactggcgcgtggaggacgtgtccagctttctgtccaagtcttcagaggacacacgt
ccccatggctcagcgtacacgtggcgggaagtgttcaacgagacggatcaggccatccag
accatctcacggttcatggagtgtgtgaacttggataagctggagccggtggctaatgag
gagcgtttggtaaacaagtccatgcatctactggatgaccgcaagttttgggctggtata
gtgtttcctgacatgcaggccaacacgtctgacctgccgcccaacgtcaactacaagatc
cgcatggacatcgataacgtggagcgcaccaacaagatcaaggatggatactgggatccc
ggtcctcgagcggacccgtttgaagacctgcgttacatctggggcggcttctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaacagga
gtttacatccagcagatgccttatccctgctacgtggacgacattttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcccggctcaaggagaccatgaggattatgggtctg
gataatggtatattgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctgctgccgtacagtgatcctggc
gtagtctacttgttcctggcctcgtttgcggtcgtgaccatcatgcagtgtttcttgatc
agcacgctcttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcact
ctctaccttccctatgtgctgtgcgtggcctggcaggattacatcggctttggagccaaa
gtagtagtgagcctcttgtctccggtggcgttcggcttcggctgtgagtactttgctctg
ttcgaggagcagggtgtgggcatccagtggagtaacctgctctccagccccatggaggag
gacagctacagtctcaccacgtccatctcgctcatgctcttcgattcggtgctctacgcc
ctcatgacctggtacattgaagctgtgtttccaggtcaatacggtatcccacgaccctgg
tacttccccttcaccaagtcatactggtgtggagagaaatgtggtgggattacatcagca
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaagaaccagctcacctg
gatccaggtgtttacatcgagaacctgatgaaggtttacagcaacggcaaactagcggtg
gacggtttgactctgggtttttatgagggtcagatcacctccttcctgggtcacaatggt
gctgggaaaaccacaaccatgtctatcctcactggcctgtttccacccacctcgggcacc
gcttacatccagggcaaagacatccgcactgatctgaacactatacgccaaaacctgggc
gtctgtccacagcataacgtcctatttagcatgctcaccgtggaggagcacatctggttt
tatgcacgtctgaagggattgcatgaggagaaggtgaagtcggagatggagcagatcgtg
atggacctcggcttgcctcataaacgcaaatctcgcaccaaccagctctcaggaggaatg
cagaggaagttatcagtagcgctggcatttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagtcgatccttacgctcgccggggcatctgggacctgctgctcaag
tatcgccaaggacgcacgatcatcttgtccacccaccacatggacgaagccgatatcctg
ggggatcgcattgccatcatctcccacgggaagctgtgctgtgtgggctcctctctgttc
ctcaagacccagctgggaacgggatactacctgacgctggtgaagaaggacttcgatctc
tcggccagctcctgccgcacctccagcagcaccgtctcctactccaaagcaagcctcaag
aaggaggacagtgtatctgagagcagctctgatgctggactgggcagcgaccatgaaagt
gaaaccaccaccatagacatctccttgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcggtcacgagatcacttatgttctgccttacgagtcggcc
aaagacggagcgtttgtggagctcttccatgagatcgacgaccggctcactgacctcggc
atttcgagttacggcatctctgacacaaccctggaggagattttcctcaaagtggcagag
gacaacggtgttgatgctgagatgtcagatgggatcatacctgcacgcaggaaccgcaga
cacgcttttggtgaccatcagagctgcctgaagcctttcactgaagacgactttgatttc
aatgactcagaaggtgatccagaatctcgtgagacggactggttgggtggtgctgatggt
aaaggttcgtaccaggtgaagggctggagtctgaagagacagcagtttatagctttgctc
tggaagcgcttcctgtatgcccgacgttcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcattgctctggtcttcagcctcattgtccctcccttcggaaag
tatcccagtctcgctctggagcccagcatgtatgaggagcagttctcgttcatcagcaat
gatgcaccagaggacagacacacaaacaagttacttgaagctctgatggacaatcccgct
tacaatgaaaaatgcacagacgagcaaaacactgctagcaaatcatgtctgattaaagat
ggagagtggatggttccagaggttcccgagaccgttcaggacatgttcgtaaaagggaac
tggagtatggaaaacccatcgcctctgtgtgaatgcagctgtgaaggaaggaaaaagatg
cttcccgagtgtccgccaggagcagggggtctgccaccgcctcagatcaaagtcaccact
gatgaaaccttgcagaatctgacaggcagaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaataagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgctagaagctctcaggccctcccccctagtgatgatatcaccgat
gccatctctcacattcgtaaccgcttcagtcttcaagcgggaaccgcagccgaccgcttt
ctgggaagcctgtcgactttcatccgaggtctcgataccaagaacaatgtgaagatctgg
ttcaataataagggctggcacagtatcggagggttcctaaatgtcatgaacaatgccatc
ctgcgtgctaatctgccccctggcctggatcgctccaaattcggcatcaaagcattcaac
catccgcttaacctcaccaaagagcagctctcacaggtggcgctaatgacgacctcagtc
gacgtgctggtgtccatctgcgtcatcttcgccatgtctttcgtcccggccagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagtggagtg
cagcccttcctctactggctggccaactttgtgtgggacatgtgtaactacattgtcccg
gcgaccctggtcatcatcatcttcgtctgtttccagcaagaggcctatgtgtcctccacc
aatcttcctgttctcgccctcctgctgttgctctatgggtggtccataacacccctgatg
tacccagcgtcattcttttttaagattcccagtacagcatatgtggttttgaccagcgtt
aacatcctcattggaataaatggcagcgtatccacgtttgtcctggagcttttcggcagc
aatgagattggtggcatcaacgacatcttgaagaatgtgttcctgatcttccctcacttc
tgtctgggcagaggactcattgacatggtgaagaaccaagctatggctgacgctctggag
agatttggcgagaatcgcttccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgccatggccatagagggcctgattttcttctgcatcaccgtccttatccagtaccgt
ttctgcatcaaggccaggccggtcagcactaaactgaagccgattggagaggaggatgag
gatgtggccagagagaggcagaggatcttgtgcggaggaggacagactgatatcctggag
ctcaaacagctcaccaaggtttataagagaaagcagaagccagcagtagacagactgtgt
gtgggcatcccaccaggagagtgttttgggttgctcggtgtgaacggagctggaaagacg
agcaccttcaagatgctcacaggagattctgttgtcactagcggagaggcctatttggca
ggaaagagcgtgctgacagagattgatgaagtgcatcagaatatgggctactgtccgcag
tttgatgccatcagcgacctgctgactggacgagaacatctggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcagattggggcattcgtaaactgggc
ctgatgaaatatgaagacaaagccgcaggaagctacagcggggggaacatgaggaagctc
tccactgcaatggcgctcatcggaggaccgccagtggtgttcttggacgaacccaccact
gggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaagcgctctgcactcgt
atggccatcatggtgaacggcaggttccgctgcctgggcagtgtgcagcacttaaagaac
aagttcggtgacgggtacaccatcatcctgcgggtggcaggggccgatccgcagctggag
ccggtgatggagttcatcgagagggagctgccgggcagcaccctgaaggagaggcacagg
aacatgctgcagtaccagctgccctcgtcgctcacatccctcgcccgcatcttcagcctc
ctttccaagaacaaagagctgctccacatcgaggactactccgtctcacagaccacttta
gatcaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
tccattaacaaaaacgatgccatcgtggacatttctcacctgagcgccttcctcgtagac
gagaaggccaaagagacggtggtgtga
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integrated database retrieval system
