Onychostoma macrolepis: 131545618
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Entry
131545618 CDS
T09350
Symbol
dmxl1
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
omc
Onychostoma macrolepis
Pathway
omc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131545618 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131545618 (dmxl1)
Membrane trafficking [BR:
omc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131545618 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
131545618 (dmxl1)
RAVE complex
131545618 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
NBCH_WD40
PEP5_VPS11_N
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SPT8
DUF1081
Motif
Other DBs
NCBI-GeneID:
131545618
NCBI-ProteinID:
XP_058640604
LinkDB
All DBs
Position
08:complement(28837973..28890648)
Genome browser
AA seq
2922 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNQPFTAYASGCDIVILGSDFERIQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGNIICVFEPVEVSPQGKAQKKLSYHWQKSGQFVLQSVAHILTWH
PTGSCLLTGSACLQLWCDAQSSTETEPAAPQRSWRCAWQCKSAASTHFIKFSPDGEFFAT
AGQDDCLVKVWYNTSKWQADVTKLFTLLDLRSGAQISFSYIYLAHPRSVTGFSWRKTSEY
MPRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHNHSSNDVMKNNSMKKSSSNSRA
QNQNPLELKLKPSWREEVRCLSQLSYSGPLPQQQNKHNTHRTNMLHANALCHFHIAASIN
PATDIPLLPSISSMNGSDEEEPGGPFTVHWLNNKELHLTLSMEVFLQQLKSSGEQNGPTE
SYDADEEGSGADAAALGSVSLPAAAVDHQVDVLLGDWNRAADMLFSIHPMDGSLMVWHVD
WLDEYQPGMFRQTQVSFVSRIPVAFPTGDANSLSRSVVMYACNRNVDLAIQHGRQRPAGL
PHSSSSALIGQSQNKPSSSSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSAFSTVLSV
SHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPAAALTAPAHRSRTASGGISQDPS
AIYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAWLPTLIPSNCLGVYGNSPS
ACFIASDGHSLRLYQAIIEAKKLLSELSNPDISKYVGEVFNIISQQSTARPGCIIELDAI
TDFQGKETQLLHVFEEDLILGSEKVDDYLQDSVPSQTLFSARFFLVVVEITQSGRSLLHM
WHLQLDAVPVIMEQTQTPGRETVSPSNVNSSQFDFETVGSPQSPRPKLKTSNLQSACRLA
LTNTKVFSQELDLPQGVEVLRVSPAAGHLSASSLQPAGRSPYLLATSCSDGSVRFWRCSA
VSDPDGSADPSYLWEEWPLLVEEGMVSSSALSVCGQLMGLSCCHTSRVAVAHRSHESIMH
ISIFQCDSTGGSQWILEQTLKVCGAYSPGANDCDKSLINGCSVKRQVHLDWVSREDGSHI
LTVGLGSKLYMYGMLSGKPPDLVLSDCSKEQSCSRLVLLRVVDLVSSVEGSLPIPVSLSW
VRDGILVVGMDCEMHVYSQWQPPAPGKPSLNGSVTSLKQEGLSPNPSKKTLTRSMTSLAQ
KLSGKRTVYDLPAEMEDSGLFEAAYHLFPTLPQYHPVQLLELMDLGKVRRAKAILSHLVK
CIAGEIVSMKDVTINQERRLRSLTISASGSTARDPKMFSKAESSDYTEIDSIPPLPLYAL
LAADEETAPSAKERSESVSTHGQSDAYDQLFQAAGVSADDMDPFDGDEEDANAKVIDLSK
YSPTFFGSEHAQVLXGHLLHSSMPGLTRMEQMSLMALADTIASTSTDIGESQGKGQGGET
LDECGLKFLLAVRLHTFLLTSLPPAHRAPLLCQGLSTCHYAWAFHSEAEEELLNMLPALQ
KGDPSWPELRAMGVGWWLRSTNKLRRCIEKVAKAAYQRNNDPLDAALFYLAMKKKAVVWG
LYRSQHNAKMTAFFSNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVC
IEKMQDLQLALVVCRLYESEFEMSCSYKRILQRHVLGXGPPDRAHQDPFLRSMAYWVLDD
YSRALDTLLEPNTDTSHEGTGSSPCSPDVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTTE
GRAVDSISLTERRLFFTAAYAHLQAGCPMLALEVLSKMPKVVKCSKPCENSHVSLSEHKD
QASALDWSQPVLNGLESVSSLSSPREDSQSDSVLSFDWSHPSVTLQDEPLELKWDSDKDN
SDEDESGLAMKTIRPEKGDGAPEAASTPRDHALDCGADDSPALTEDMLAAQLKFSSCLKI
LTTELRTLSTGYELDGGKLRHQLCHWLERAVAALQSCCGYNPFLQQLPEGISTDLSQVED
LEERGSAEQARELQHRRRLWLKRNQPLLRIFLSYCSLHGSHGGGLASVRMELILLLQESQ
QDGGLQISAPAPQHMSVPLFLAWTASSKTVVANPIVHLTNLTHDILHTINALDAPPHPDI
VNNEIYVMHTLAASLSACIYQCLCDGHNYSHVNPFTGITYQSVLLTHQPPVRSVSMEEAI
LPNTSPAQWPGVSVLMRLLSASGDENQPGLPVLLCEILTAVFLGLFVHGLATHSSHELFR
IVAHPLNSKLWVAVFGGGARARAPVPEKPSSPTVEDAERKQRRFRLRSSRSNSREVPDSP
VSPVSPRPRPVVMELDTSVSKERFVPPELSIWDYFIAKPYLPPSASRVEYDSEESQGSEE
EDDEEDEDEGDSFDTNSPLAEHSNNNSYSWCLMRLAMVQTVLFNLKTLYPMAGHDLLDLP
VCSPLCHAALKTLQRWEQLLLKRLEIFGGPPSRFICTQLLEESVSSGPALLRHKALFEPS
NTPFRSRRRSALPVRRLWQYLVKQEEVQETFIRNIFTKKRDQNEETDSVKCSVPPESTHN
QIEADLGFPGRKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDVSSILATQILTW
VDDENENEVKGTDDFLVVHARDDFTALHGSTPYTHSSPGTPINMPWLGGLQTGRGAAVLI
KRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSPGNSRVTRIRFNYQGN
KFGIVDADGALSLWQTSTSGNTPKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNV
CLWDTLVTPAYSLVHGFICHESGSTVLALASKQQLLLSGGRRGWISVLDLSLKIQRQSFQ
AHDSPVKALAVDATESCFISGSAEGNIKVWSMSTQSLLHNFSNEHARQSLFRNLGTGVMQ
IETGPANHIFSCGADGTMKLRLLPDALSLYCSAAKSDVRFIM
NT seq
8769 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacaggagccgtaaaccccggagacaactgcttctctgtg
ggcagcgtcaacaaccagcccttcacggcctacgcctctggctgtgacatcgtcattctg
ggaagtgactttgaaaggatccagatcatcccaggagccaaacacgggaacatccaggtg
ggctgtgtggactgttcactgcaaggcggacagattgcagcgtcgtatggaaacattatt
tgtgtgtttgagccggtggaggtcagtccacaaggaaaagcacaaaaaaagctgagttat
cattggcagaagagcgggcagtttgtcttgcagtcggtggcacacatcctgacgtggcac
cccacaggttcctgtctgctgacgggctcggcgtgtctgcagctgtggtgtgacgctcag
tccagcactgagaccgaacccgccgctcctcagcgctcctggagatgcgcatggcaatgc
aagtccgccgcttcgactcacttcatcaagttttccccggatggagagttttttgcgact
gcaggacaggacgactgtctggtgaaggtgtggtacaacaccagtaaatggcaggcagac
gtcaccaaactcttcacgctgctcgacctgcgctccggagcccagatcagcttctcctac
atttacctggctcaccctcgctccgtcaccggcttctcctggaggaagaccagcgaatac
atgcccagaggcgcggtgtgtaacgtgctgctgacctgctgcaaggacagtgtgtgtcgc
ctgtgggccgaaacgctgctgcccagcgactgtcttctgtctggactccggcacaatcac
agcagcaacgatgtgatgaagaataacagcatgaagaagagctccagcaacagccgagcg
cagaaccagaacccgctggagctgaagctgaagccgtcgtggagagaggaggtgcgctgt
ttatctcagctctcatacagcggtcctctgccccagcagcagaacaaacacaacacacat
cgcaccaacatgctgcacgccaacgcactgtgccacttccacatcgccgccagcatcaac
ccagccacagatatccctctgctgccctccatctcgtccatgaacggctctgatgaggag
gaaccgggcggtccgttcaccgttcactggctcaataacaaagagctgcacctgacgctg
agcatggaggtgtttctacagcagctgaagagcagcggcgagcagaacgggcccacagag
agctacgatgctgatgaggaggggagcggtgctgatgctgcggctctgggctccgtctct
ctccctgcggcggcggtggatcatcaggtggatgtgctgctgggagactggaacagagca
gcagacatgctgtttagcatccacccgatggatggctcgctgatggtgtggcacgtcgac
tggctggacgaataccagcccggcatgtttcgacagacgcaggtttccttcgtgtccagg
attcccgtggccttccccaccggcgatgccaactctctcagccgcagtgtggtcatgtac
gcctgcaacagaaacgtggacctggccatccagcatggccgtcagcgtcccgcgggcctg
ccgcactcgtcgtcctccgctctgatcggacagagccagaacaaaccctcctccagcagc
ctgcggctcagcatcttcacccccagcgtcctgatgatctccaaacacgctgacggttcg
ctcaaccagtgggccgtcagcttcgccgaggactcggccttctccacggtactcagcgtc
tctcacaagtcacggtactgcggtcatcgcttccacctcaacgatctggcctgccactct
ctgctgccgctgctgctgaccacctcgcaccacaacgccctgcggacgcccgccgctgct
ctgaccgccccagcccacaggagcaggactgcgtctggtggcatctcgcaggaccccagc
gccatctacagcgagctgatcctatggcgggtggatccggtggggccgctgtcgttctcg
ggcggcgtgtccgagctggccaggatcaactccctgcacgcctccgccttctctaacgtg
gcctggctgcctacgctcatccccagcaactgcctcggtgtgtatggaaactcacccagt
gcctgcttcatcgccagtgacggacactcgctccgactctatcaggccatcatcgaggcc
aaaaaactgctgagtgaactctccaaccccgacatctccaaatatgttggagaggtgttt
aacatcatcagccagcagtcgacggccagaccaggctgcatcattgagcttgatgccatc
acagactttcaggggaaagagactcagctgttgcacgtgttcgaggaggacctgatcttg
ggaagcgagaaagtagacgattacctgcaggattctgttcccagccagacgctcttctcc
gctcgcttcttcctggtggtggtggagatcactcagagcggcaggtcgctcctgcacatg
tggcatctacagctggacgcagttcccgtcattatggagcaaactcaaactcccggcaga
gagacagtgtctccatcaaacgtgaacagctcacagtttgactttgagacggtcggctcg
ccacaatccccaagacccaaactgaagacgtctaacctccagagcgcctgccgcctcgct
ctgaccaacacaaaagtcttcagtcaggagctggatctgccgcagggcgttgaagtccta
cgtgtatcacctgctgcaggtcatttgagcgcctcgtctctgcagccggccggacgctct
ccgtatctgctggccacgtcttgctcagatggatccgtccggttctggaggtgcagcgct
gtctctgaccccgatggctctgctgacccgtcgtacctctgggaggagtggcctttgctg
gtggaggagggcatggtcagcagcagcgctctgagcgtgtgcggtcagctcatgggtctc
agctgctgtcacaccagcagagtcgcagtcgcgcaccggagccacgagtccatcatgcac
atcagcatcttccagtgcgactccaccggaggctctcagtggattctggagcagacgctt
aaagtctgcggcgcatacagccccggtgcgaacgactgtgataaaagcctgattaacggc
tgttcagttaagaggcaggtacacttagactgggtttccagagaagacggctctcacata
ttaactgtagggctaggatccaaactttacatgtacgggatgctttctggaaaacctcca
gatctggtactctctgattgcagtaaggagcagagctgctctagattggtgctcctccga
gtggtggatctggtgtcgtcagttgaaggctcgctacccattcctgtctctctatcttgg
gtgcgagatggcatcttagtagtcgggatggattgtgaaatgcacgtctattcccaatgg
cagccgccggctccgggcaaaccgtcacttaatggtagcgtgacgtcgcttaaacaggag
ggactcagtccgaatccttctaaaaagaccctcaccagatccatgactagtttggctcag
aaactcagcggaaagagaaccgtgtacgacctcccggccgagatggaggattctgggttg
tttgaggcagcctatcacctgtttcctactcttccccagtatcatccagtgcagctgctg
gagctcatggaccttgggaaggtgcgacgagctaaagccatcctgtcccatctggtgaag
tgcattgctggggagatcgtgtctatgaaggacgttacgattaaccaggagcggcgtctg
cgctcgctcaccatcagcgccagcggaagcaccgctcgagatcccaagatgttcagcaaa
gctgagagctccgactacaccgagatcgactccatcccgccgctgcctttgtatgcgctg
ttagccgccgacgaggaaacggctccgagtgccaaagaacgatcggagagcgtgagcact
cacggccaaagcgacgcttacgaccagctcttccaggccgccggcgtcagcgcggatgac
atggacccttttgatggcgatgaggaggatgcaaacgctaaagtcattgatctgtcgaaa
tacagccctacgttttttggatccgaacatgcacaggtgttantcggacacctgctacac
tccagcatgccgggactgacgcggatggagcagatgtctctgatggctttagcggacacc
atcgcttccaccagcaccgacattggagaaagccaagggaaaggccaaggtggagagacg
ctggatgaatgtggactgaagttcctgctggccgttcgtctgcacaccttcctcctcacg
tctctgcctccggctcatcgcgctccgctcctctgccaaggactgtccacctgtcactac
gcctgggcgttccactccgaggctgaagaggagctgctcaacatgcttccggcgctgcag
aaaggagatccctcgtggcccgagctgagagccatgggtgtgggctggtggctcaggagc
accaataagcttcgcagatgcattgagaaggtagcaaaagctgcttatcagagaaacaac
gacccgttagacgcagccttgttttatctggccatgaagaagaaagctgtggtctgggga
ctgtacaggtcccaacataacgcgaagatgacggcgttcttcagcaataacttcagtgaa
gaccgctggaggaaggcagcgctgaagaacgctttctctctgctcggaaagcaacgtttc
caacattctgcggctttctttctgctggctggatccctgaaagatgctgttgaggtttgt
atagagaagatgcaggaccttcagctggctctggtggtctgtcggctgtacgagtctgag
ttcgagatgtcctgcagctacaagcgaatcctgcagaggcacgtgttgggtncaggacca
ccagatcgcgcccatcaggaccctttcttacgcagcatggcgtactgggtcttagatgac
tacagcagggctttggacacgctgcttgagcccaacacagacacgtctcatgaaggaacc
ggatcatctccctgtagtcctgatgtttttaacttctacacctacctccgcacacacccg
ctgctgctgcgccgtcacttcggctcctcggataaagctaaagtgggtctgaccactgaa
ggccgcgccgtcgactccatcagcctcacagagaggaggctcttcttcaccgccgcttat
gcgcacttacaggccggctgccccatgctggctttagaggtgctctccaaaatgcccaaa
gtcgtgaagtgctcgaagccctgcgagaattcgcacgtgtcgttgagcgagcacaaagac
caggcctcggctctggactggtctcagccggttctcaacggcttggagtcggtgtcctcg
ctctcgtctcccagagaggacagtcagtcggactcggtgctgagtttcgactggagccat
ccgtccgtcaccctgcaggacgagcctctggagctcaagtgggacagcgataaagacaac
tcggacgaggacgaatcgggcctggcgatgaagaccatccgtccggagaaaggcgacggc
gctccggaagcggcgtccacccccagggatcacgcactagattgcggcgcagacgattcg
cccgcgctgaccgaggacatgcttgccgcgcagctgaagttcagctcctgtctgaagatc
ctgaccacggagttgcggacgctgtccacgggatacgagctggacggagggaagctgcgg
catcagctgtgccactggctggagcgagccgtggcggcgctgcagagctgctgcggctac
aaccccttcctccagcagctgcccgagggcatctcgaccgacctgagccaggtggaggat
ctggaggagcggggctcggcggagcaggcccgagagctgcagcaccggcgcaggctttgg
ctgaagaggaaccagccgctgctgcgcatcttcctgagctactgcagcctgcacggctct
cacggaggaggactggcctcggtccgcatggagctcattctgctgctgcaggagtcccag
caggacggcggtctgcagatctccgctcccgctccgcagcacatgtctgttcctcttttc
ctggcttggaccgccagctccaaaacggtggtggccaatcccatagtgcacctgaccaac
ctcacgcatgacatattgcacaccatcaacgctctggacgcgcctccgcacccggatatc
gtcaacaatgagatctacgtgatgcacacactggcggcttccctctccgcctgcatctat
cagtgtctctgtgatggacacaattacagccatgtgaatccgttcacgggcatcacctac
cagagcgtcctgcttacccatcagcccccggtgaggagcgtcagcatggaggaggccatc
ctgcccaacacctctcctgcgcagtggcctggtgtgagcgtcctgatgcggctgctgagt
gcgtctggagacgagaaccagcccggtctgcctgtgcttctgtgtgagatcctgaccgct
gtcttcctcggcctgttcgtccacggtctggccactcactccagccacgagctcttccgc
atcgtcgctcacccgctcaacagcaagctgtgggtggccgtgttcggcggcggcgctcgc
gctcgtgctcctgtgccggagaaacccagctcacccacagtggaagatgcggagcggaag
cagcggcgtttccggctgcgctcatcacgcagtaactccagagaggttcccgacagcccg
gtcagcccggtcagccccagacccagacccgtggtgatggagctggacacatccgtcagt
aaagagcgtttcgtgccgcctgagcttagcatctgggactatttcatcgcaaagccgtac
ctgcctccgtccgccagccgagtggagtacgactctgaggagagccaaggcagtgaggaa
gaggatgatgaggaagatgaggatgaaggagattcctttgataccaactctccgctggca
gagcattccaacaataactcgtacagctggtgtctgatgcgcttggccatggtgcagacg
gtcctgttcaacctcaagaccttatacccgatggcaggtcacgacctcttagatctgccc
gtgtgctctccgctctgtcacgccgctctcaagacgctccagcgctgggagcagctgctg
ctcaagaggctggagatattcggaggtcctccgtcgaggttcatctgcacacagttgctg
gaggagagcgtgtcgtcaggtccggcgctgctgcggcacaaagccctgtttgagccctcc
aacacacccttcaggtctcgccggcgctccgctctgcccgtcagacggctgtggcagtat
ctggtcaaacaggaagaggttcaggagacgttcatacgaaacatcttcaccaagaaacga
gatcagaatgaggagactgacagtgtgaaatgttctgtgccgccggagtccacacacaac
cagatcgaggctgatctggggtttcctggaagaaaagctcgcatcatccacaaggagtcg
gacatcatcacggcgttcgccatcaataaggccaatcgcaactgtttagtgatcgcctcc
acccacgacatccaggagctggacgtgtcctccatcctcgccacgcagatcctgacctgg
gtcgatgacgagaacgagaacgaggtcaaagggacggatgatttcctggtggttcacgct
cgggacgacttcaccgcgcttcacggcagcacaccctacacccacagcagccccgggaca
cccatcaacatgccctggctgggcggcctgcagacgggccgaggagccgccgtgctcatc
aaacgcaacatcaacaacgtgaggcggatgacgtcacaccccacgctgccctactatctg
accggagctcaggacggcagcgtgcgcatgtttgaatggggtcactcacagcagatcacc
tgcttcaggagccccgggaactccagggtcaccaggatacgcttcaattatcagggcaat
aagtttgggatcgtggatgcggacggagcgctcagtctctggcagaccagcacctcagga
aacactcccaaaccctatctgactcttcagtgtcacaataaaaccgcaaatgactttgtg
tttgtgggctcatcatctctcatcgccaccgcaggcctgtccacagacaacaggaacgtg
tgtctgtgggatacgctggtcacgccggcatacagtctagttcacggcttcatctgtcac
gagtctggctccacggttctggctctggcgtccaaacagcagctgctgctcagcggaggc
cggcggggctggatcagtgttctggacctcagtctgaagatccagcgccagagtttccag
gctcacgactcgcccgtcaaagcgctggccgtcgacgccaccgagagctgcttcatcagc
ggatcggccgagggcaacatcaaggtgtggagcatgtccacccagagcctcctgcacaac
ttcagtaatgaacacgctcgccagtcgctcttccgtaacctgggcacaggtgtcatgcag
atcgagaccggcccggccaatcacatcttctcctgcggcgcagacggcaccatgaagctg
cgcctgctccccgacgctctgagcctctactgcagcgcagccaagagcgacgtcaggttc
atcatgtag
DBGET
integrated database retrieval system
