Onychostoma macrolepis: 131545671
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Entry
131545671 CDS
T09350
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131545671 (rbm39b)
Spliceosome [BR:
omc03041
]
Common components
Common spliceosomal components
General mRNP proteins
131545671 (rbm39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
131545671
NCBI-ProteinID:
XP_058640691
LinkDB
All DBs
Position
08:8662479..8675686
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AA seq
545 aa
AA seq
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MADDFDVEAMLEAPYKKGESKSSSANGHNEERSKKKRRSGSRSPSPGRQRSRSGGRKKSR
EQRRSRSHERKRSRSRERKRSRSRSKDRGGRFRGRKSPLLTTCGEKQQQQPSRSTQRKSM
GSKLNGGPGGKTGPQHFTKHSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQL
AARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVESTSVPLAIGLTGQRVLG
VPIIVQASQAEKNRAAAMASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQ
LMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLD
SDELERTGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASTTQPLV
PNPGMNQAMNLPNQPLATHCLQLSNMFSPQTENEPGWDMEIKDDVIEECKKHGGIVHIYV
DKNSAQGNVYVKCPTIPVAMAVVSALHGRWFAGKMITAAYVPLPTYHNLFPDAATATELL
RPMHR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgacgttgaggccatgctggaagctccttataagaagggtgaaagc
aagtcctctagcgccaatggtcataatgaggaacgcagcaaaaagaaaagacgcagcggc
agtcgtagtccgagcccaggtcggcagaggagtagaagcgggggccgcaaaaagagccgt
gagcaacgcaggagccgcagccacgagcggaaacgttcacggagcagagaacgcaagcgg
tcacgatcccgcagcaaggatcgtggtggacgttttcgtggacgcaaaagccccttactt
acaacttgtggtgagaagcagcagcagcagccgtctagaagtacgcagagaaaaagtatg
gggtcaaaattaaatggtggtcctggagggaagaccggcccacaacatttcaccaaacac
agtcgcaggcgctctcggagcagaagcccatttaagaaggacaaaagccctgtcaggcaa
ccgatagataatctgaccccagaggagagagacgcccgtaccgtgttctgcatgcagctc
gctgccagaattagacccagagatctggaagatttcttctctgcagtgggaaaagtccgt
gacgtaaggatgatctctgatagaaactctcggaggtcgaaaggcattgcctacattgag
tttgtggagtcgacatcggtaccgctggcgatcggcctgacggggcagagggttctggga
gtgcctatcatagtccaggcttcacaggctgagaagaacagagcagcagccatggccagc
atgctccagagaggcggtgcaggaccaatgcggctgtacgtgggctccctgcatttcaat
ataactgaagacatgctcaggggcatttttgagccgtttggaaagattgagggcatccag
ctaatgatggacagtgagactggcaggtcgaaaggatacggcttcatatcatttgcagat
gcagaatgtgctaaaaaagccctggagcagctaaatggtttcgagcttgcgggacggcca
atgaaggtgggtcatgttaccgagcgttcggatgcctcgtctgcaagctccttcttggac
agtgatgaactggagagaactggcattgacttgggcacaacaggtcgacttcagctgatg
gcaagactcgcagaaggtacaggactgcagattcctgctgctgctaagcaggccttacag
atgagcggctctgtggcatttggaaatctggcaaatgcctcaaccacacaacctcttgtt
cccaatcccgggatgaaccaagctatgaaccttccaaatcagccactggctacgcactgt
ttgcagctctccaacatgttcagtccacagacggaaaacgagcctggctgggacatggag
ataaaggatgatgtcatcgaagagtgcaaaaagcacggaggcatcgttcacatatatgtc
gacaagaactctgctcaaggaaatgtttatgtaaagtgtccaaccatcccagtagcaatg
gctgttgtcagcgccctgcacggccggtggtttgcaggtaaaatgatcacagctgcctac
gtgcctctccctacgtaccataacctgtttccagatgccgccacagccacagagctcttg
aggcccatgcaccggtga
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