Onychostoma macrolepis: 131545933
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Entry
131545933 CDS
T09350
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131545933 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131545933 (lsm1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131545933 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
131545933 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
131545933
NCBI-ProteinID:
XP_058641157
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All DBs
Position
08:7522155..7524228
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataagaaacaccttgtt
ctgcttcgcgatggaagaacattgattgggatccttagaagcatagatcagtttgcgaat
ttagttttgcatcaaactgttgaacgtatccacgttggtaagaaatttggtgacatacct
cgtgggatatttgttgtcagaggagaaaatgtcgtcttgcttggagaagtagatctggat
aaagagtgtgatcagatcctccagagagtttccattgaggaaatcctggaggaacagcgg
acagaacagcaagccaagcaagaatcagagagactgaagctacaggcggtgaaagagcga
ggcttatcgatccctaaagctgacacgttagatgatttctga
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