KEGG   Onychostoma macrolepis: 131546003
Entry
131546003         CDS       T09350                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
omc  Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omc03041]
    131546003 (smu1b)
Spliceosome [BR:omc03041]
 Complex B
  Other components
   Complex B specific factors
    131546003 (smu1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st ANAPC4_WD40 WD40_Gbeta LisH_TPL Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st PROPPIN Beta-prop_IP5PC_F Beta-prop_WDR75_2nd WD_LRWD1 VPS8_N Beta-prop_DCAF12 LisH DUF7899 LisH_PAC1 LisH_WDR26 DUF7165
Other DBs
NCBI-GeneID: 131546003
NCBI-ProteinID: XP_058641256
LinkDB
Position
01:17188936..17201558
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIDSFISDINNGQWDIVL
LAIQYLKLPDKLLIDLYEQIVLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSHLETL
LTKPAFDSQEAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGTLKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDEAVLCLAVSH
DSDMIASGAQDGKIQVWRILNGTCLNRIERAHSKAVTCVCFNKDSSQLLSASFDQIIRLH
GLKSGKMLKEFRGHTAHINDVIFSHDGQHVISASADGTVKVWSMKTMDCTHIIKTPDIPE
GTDITVNNVVLIPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSDDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggaccttgaagtggaatcagcagacgtgattcgtctgatcatgcaatatctgaaggaa
aataatctgcaccgcactctggcgatgcttcaagaggagacagcagtctcgctccacacg
gtcgacagcatcgacagcttcatctccgatatcaacaacgggcagtgggatatagtgctg
ctagcaatccagtatctgaaacttcctgacaagctgctcattgacctgtacgaacagatt
gtgctggagttgattgagttgggtgagctgggagctgcccagtgtttactgaagcaaacc
gatcccatgatcatgctgaagcacactcaacctgagcgctactcgcacctggagaccctt
ctcacaaaaccagcttttgattcacaagaggcatatccagtgggcagcagtaaagagaag
cgcaggctggctatcgctcaagcttttgcaggagaagtctgtttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggggctttatacaggttacaggaa
accaaagcactaaggcagtttggctcattagcaatgctgtcattgaagtggcagcagcac
cagggtctcttacctccaggtatgtctttggaactgttccggggcaaaggtacattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccatgtagagtgtgcacgattctctcctgatggacagtacttgattactggatctgtt
gatggtttcattgaagtctggaacttcaccactggtaaaattcggaaggatctgaagtac
caagctcaggataatttcatgatgatggatgaggctgttctgtgtctggcagtaagtcac
gactctgacatgatcgcctctggagctcaggatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacagcaaagcagtcacctgtgtctgc
ttcaacaaggacagcagtcaactactaagtgcctcctttgaccagatcatcaggcttcat
ggtttgaaatcaggaaaaatgctgaaggagttcagaggccatacggctcatataaatgac
gtcatcttctcacatgatggccagcatgtcatcagcgcgtcagcagatggcacagtaaag
gtctggagcatgaagacaatggattgcacccacataataaaaacccctgacattcctgag
ggtacagacattactgttaacaacgtcgtgcttatcccaaagactcctgagcactttgta
gtgtgcaataggaccaacacagtggttgttacaaacattcatggccaggtgatgaggagt
ttctgttcaggcgtaagagagggcgcagactttgtttgctgcacattgtctccacgtgga
gagtggatttattgtgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aagctagagagaaccctcacggtacatgaaaaagatgtgattggcataactcaccacccc
catcagaatctcattgccacatacagcgatgatggcctactcaaactctggaagccttga

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