Onychostoma macrolepis: 131546220
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Entry
131546220 CDS
T09350
Symbol
rnf180a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131546220 (rnf180a)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131546220 (rnf180a)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131546220 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
131546220
NCBI-ProteinID:
XP_058641606
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All DBs
Position
08:11837768..11845985
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AA seq
395 aa
AA seq
DB search
MDSHGEEDLGHTAEALCLEVRPLQKAKLGARLAHRKTFSLDYTNAHREAHYREQNSPGYS
ELHFPDRDLQTGRILRSTASQQASTSPCHRTSPPPYSRAVMLSRRSDLEPVRSDIIRGSH
ISREDQEAGGSFNRRAPLMSLSSSDEEQEAGEQAGRAPAGLSVASSLLTPTPTGERRPGK
RERKRLKSLRRRQRRRERCRQSQQQENVQSSTGNPSSSSEDEELPGRDREGYICAVCLDV
YFSPYMCHPCSHVFCEPCLRTLAKNCPTNTPCPLCRTTITHVFFQKELNHTARTFFPKEY
LSRKQNFQKAGCAKWPLPSCRKLFRIFGGFQRQASPIGRRQFPHGGYRLDAFNFEDDSHG
WRFDMDMVIIYIYSVNWVIGFIIFCFFCYFFFLSF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcatggagaagaggaccttgggcacacggcggaggccctgtgtttggaggtc
aggcctctgcagaaggccaaacttggagccagactagcccacaggaagacgttcagtctg
gactatacaaacgcccaccgggaggctcattacagggagcaaaactccccaggatactct
gaactgcactttccagaccgtgatctccagacagggcgtattctgaggtccacagccagc
cagcaggcctccacttccccatgccataggacgagtcctcctccctatagcagggctgtg
atgctttcgaggaggtctgatctagaacctgttaggtcggatattattagaggctcacac
atctctcgcgaggatcaggaagcaggcggctccttcaaccgcagagctcctctgatgtct
ctcagcagctctgacgaggaacaggaggctggagaacaggctggcagagctccagcaggg
ctcagcgtggcttcatccctgcttacacccactcccactggggaacgcaggccgggtaag
agagagaggaagcgactgaagagcctgaggaggagacagaggaggagagagcgctgcaga
cagagccagcagcaggagaacgtgcagagctctacagggaacccatctagcagcagtgag
gatgaggagctgcccggccgggatcgtgaaggctatatctgtgctgtgtgtctggatgtc
tacttcagtccgtacatgtgccatccctgcagccacgtcttctgtgagccttgtctgcgg
acgctggccaagaactgccccaccaacacaccctgtccattgtgcagaaccaccataaca
catgtcttcttccagaaagaactgaaccatacagcccgtacattcttcccaaaggaatat
ctgtctcggaagcagaatttccagaaagcaggctgtgcaaaatggcctcttccgagctgc
cgtaaactgtttcgaatttttggaggctttcaaaggcaggcaagtccaatcggcagacgc
cagttccctcacgggggctaccggcttgatgccttcaactttgaggatgattcgcatggc
tggcgatttgacatggacatggtgatcatctatatatactccgtcaactgggtcattggc
ttcattatcttctgcttcttctgctatttcttcttcctctctttttaa
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