KEGG   Onychostoma macrolepis: 131546371
Entry
131546371         CDS       T09350                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
omc  Onychostoma macrolepis
Pathway
omc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131546371 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omc03041]
    131546371 (bcas2)
   03400 DNA repair and recombination proteins [BR:omc03400]
    131546371 (bcas2)
Spliceosome [BR:omc03041]
 Complex B
  Other components
   Prp19 complex
    131546371 (bcas2)
 Complex C
   Prp19-CDC5 complex
    131546371 (bcas2)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    131546371 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7
Other DBs
NCBI-GeneID: 131546371
NCBI-ProteinID: XP_058641908
LinkDB
Position
08:23037170..23043274
AA seq 225 aa
MAGPASVAGDVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLATPDFSA
FETEIMRNEFERLGARQPMELLSMKRYELPAPSSGQKNDITAWQDCVNNSMAQLEHQAVR
IENLELMAQYGANAWKVSNDNLALMIENAQKELQKARKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIIQLENEVAQMKQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcaggaccagcttcagtcgctggtgatgtttttgtcgatgctctgccttatttcgac
cagggttatgatgctccaggggtcagagaagccgcagctgctttggtggaggaagagacg
agacgatacagaccaaccaagaactacttgagctaccttgccacaccagatttctctgct
tttgagacagagatcatgaggaatgagtttgagagactgggtgctcgtcaacccatggag
ctgctcagtatgaagagatatgagcttcctgctccatcttctgggcagaaaaatgacatc
acagcatggcaggactgtgtcaataactctatggcccagctggagcatcaggcagtgcgc
attgaaaacctcgagctcatggctcagtatggagctaatgcatggaaggtgtctaatgat
aacttggccttaatgattgaaaatgcacaaaaggaactgcagaaagctagaaagcagatt
caggacctgaactggcagcgcaaaaatgatcagctggctggtggagccaaactacgagaa
cttgagtcaaactgggtgtctctcgttagtaagaactatgagattgaacgagccatcatt
cagctggagaacgaagtggcacagatgaaacagcaacagggtgatgagaacaaagagaat
attcgacaggacttttaa

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