Onychostoma macrolepis: 131546662
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Entry
131546662 CDS
T09350
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
omc
Onychostoma macrolepis
Pathway
omc04382
Cornified envelope formation
omc04510
Focal adhesion
omc04512
ECM-receptor interaction
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131546662 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131546662 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131546662 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131546662 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omc04147
]
131546662 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131546662 (col4a2)
Exosome [BR:
omc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
131546662 (col4a2)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131546662 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
131546662
NCBI-ProteinID:
XP_058642413
LinkDB
All DBs
Position
09:complement(30842652..30944116)
Genome browser
AA seq
1669 aa
AA seq
DB search
MEGENHLQHWNTLRCFLLCLAVLILTTEVNAGVKKSGGPCGGRDCSGGCQCFPEKGARGL
PGPLGPQGPTGPNGRLGDPGLQGTKGEKGDHGRGGIMGPKGSVGMEGVPGFNGADGVPGH
PGPSGSRGKPGADGCNGTRGESGTPGLPGFDGGPGISGRPGMKGEKGDPLDLWIYMQRFR
GDSGPPGFPGFAGPTGNPGYKGMPGLQGPLGPTGIKGVKGQKGESSKKIKGMKGELGEIG
ETGPPGPYSQIRTIPPEWQGDKGLKGSKGQPGDLGYLSTKGETGVSGFPGQRGNPGRSGL
PGPGGETGLPGFPGNSGRKGDRGEPGEPTDPFDNTGVGPPGPPGERGPIGNLGPKGAKGL
LGPPGPPAAEQQAVDLWGPEGPRGSKGAKGEAGEPGNPATQPGPTGPDGIPGFIGPPGPK
GSLEEFFKGAPGPRGRPGNAGKKGPKGDHGPCDCDVRSPPGPPGPPGDAGDFGMAGEWGQ
QGDQGEPGTIGVDGMPGIAGTRGSPGPKGRKGELGFATQKGQPGDPGDPGASGFLGEQGR
HGLDGRDGEPGFQGLPGEGPVGEPGDKGYPGRGGPPGLIGLIGQPGQVLGATKGLRGLPG
DEGQVGIEGKQGLPGAPGDCSPQGGDQWSIPVECIGDPGPPGERGQPGLPGLGGFPGLQG
AKGSPGLFGEPGAKGEKGEPGRGGPPGPIGFVGPRGDLGYPGTKGVEGTPGLSGKPGVDG
ALGEKGEHGEVLGASSGAAGDLGLPGQRGVIGLPGDPGPQGHHGMEGMPGMIGLKGESGP
PGFQGETGTPGSPGTFGFPGQPGQVGPPGPPGKTGEAGPSGERGNQGDPGLSGPRGVKGV
TGEPGNFGLQGNIGPPGDPGQQGPFGIDGHPGIKGSKGGQGMTGFPGMPGKHGLTGFSGQ
KGKIGDPGRQGAKGPPGSPGLKGERGLMGPPGEKPIIHITPHMKEVMKGAKGDHGKMGDT
GFTGPRGTKGFPGVPGTEGEDGHPGEPSDAKGTRGFPGVEGFPGQKGLPGFTGLPGIDGF
PGMPGPRGDKGTSGAYGRTGESGIKGIKGEFGPTISLPGSTGLRGETGLPGPFGVKGLIG
NTGERGSPGFDGIEGMKGYPGEAGKVGLSGSDGLQGFPGTQGQKGWPGVPGQAGAPGVQG
QPGQKGFPGLKGIFGLDGLKGQKGIMGVAGSDNLGPSGEPGAKGERGETGVPSTEAGVPG
EAGFKGFIGDPGNKGESGRPGVPGPQGQQGFSDRKGVQGDYGFPGPQGLPGFPGPRGIPG
DSSPFGAKGLKGNPGDFGFTGEKGVQGDTGEEGPSGEPGVSGRKGEKGEPGMMGIPGRRG
FEGDWGPVGPKGDTGPPGFPGLPGAKGRPPVPQKLPGERGPHGSMGIQGPQGRNGNPGPA
GPPGDRGVLGPKGEKGMPGLPGIPGNPGFRGEYGQLGHPGLQGEEGTQGGPGLPGPIGMP
GRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFN
TMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEETDIKPYISRCSVCEAPSVAIAI
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDETFQSSPSSETLKAGQLLARISRCQVCMKNL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaccatctacagcactggaacacattaaggtgttttctgttgtgcctt
gctgtccttatccttacgacagaggtcaatgcaggagtgaagaagagcggtggaccatgt
ggggggagagactgcagcggagggtgtcagtgttttcctgaaaagggtgcgaggggatta
cctggacctcttggtccccaggggcccacaggccctaacggccgactgggggaccctggt
ctccagggcactaaaggagagaaaggagaccatggcagaggaggcattatgggtccaaaa
ggaagtgtgggaatggagggtgttccagggtttaatggagcagatggagttccgggccat
cctgggccgtctgggtctcgtggaaaaccaggagctgacggatgtaacggaacccgggga
gaatcaggaacaccaggccttccaggattcgatggtggacctggaatatcaggccggcca
ggaatgaagggagagaagggtgaccctttggatctgtggatctatatgcaaagattcagg
ggagattcaggaccaccaggttttccaggatttgctggaccaactggtaacccagggtac
aaaggaatgccaggattacaaggccctttgggtcctactggcattaaaggtgttaaagga
caaaagggtgaaagcagtaaaaagataaaaggaatgaaaggagagttgggggagattgga
gagacgggcccaccaggaccttactcacaaatccgtacaatccctccagaatggcagggt
gataagggcttgaaaggttctaaaggtcaaccaggagatttggggtatttatctaccaaa
ggagagactggtgtgtcagggtttccaggacaacggggaaacccaggacgaagtggcttg
ccaggacctgggggtgagactggactaccaggtttcccaggaaattctggccgcaaggga
gacagaggggaacctggagagcctacagatccttttgataatactggagtgggtcctcca
ggacctcctggagagcgtggcccaattggaaatcttggtcctaagggtgctaaaggactg
ctgggtcctccaggcccccctgccgctgaacaacaagcagtggatttgtggggtccagag
ggaccacggggatcaaagggagccaaaggtgaagctggagaacctggtaatcctgccact
caacctgggccaactggccccgatgggatacctggatttattggaccacctggacccaag
ggatcattggaagaattcttcaaaggcgcaccaggaccacgtggacgtccaggaaatgca
gggaaaaagggaccaaagggtgaccatggtccatgcgattgcgatgtaagatccccacct
ggtcctccgggtcctcctggtgatgctggggactttggcatggcaggcgagtggggtcag
cagggtgatcagggagagccaggaaccataggtgtggatgggatgcctggtatcgctggt
acaagaggatcacctggacccaaaggcagaaaaggagagctgggattcgctactcagaaa
ggacaacctggtgacccaggggacccaggtgctagtggctttctaggagagcaaggaagg
catgggcttgatggaagagatggtgaaccaggttttcaaggacttcctggagaaggtcct
gtaggtgagcctggagacaaggggtacccaggtcggggtggtcctccaggtctaataggt
ctaataggacaacctggtcaagttctcggagcaactaaaggtctaaggggccttcctgga
gacgaaggacaagttggtattgaggggaaacaagggttacctggtgctccaggagactgt
agcccacaaggaggagatcagtggagtattccagtggaatgtattggagatcctgggcca
cctggagagagagggcagcctggacttccagggttaggtggatttcctggactgcaaggt
gctaaaggctcaccaggtctttttggagaacctggagccaaaggagagaaaggtgaacca
ggaagaggaggcccacctggaccaataggttttgttggacctcggggcgacttaggatat
cctggcaccaaaggtgtggaaggaactccaggcctttctggtaaaccaggtgtggatggt
gctttaggggaaaagggtgaacatggtgaagttttaggagcttcttctggcgccgctgga
gacctaggactgcctggacaaaggggtgtcattggtcttccaggagacccaggacctcaa
ggacaccatggtatggagggaatgcctggcatgattggccttaagggtgaaagtggccct
ccaggttttcaaggagagacaggaacacctggatcaccaggaacatttggctttcctggg
cagcctggtcaagtaggacctcctggaccacctggaaagaccggagaagcaggtccaagt
ggagaaagaggaaatcagggagacccaggcctttctgggcccagaggagtaaagggtgtc
actggagaaccaggaaactttggtctacaaggaaatattgggccacctggagatccagga
caacaggggccatttggtattgatggtcatccagggataaaaggttccaaaggtggtcag
ggcatgacgggtttccctggaatgcctggtaagcatggtctgacgggcttttcgggacag
aaaggaaaaataggtgatccaggacgacaaggtgcaaaaggacctcctggctctccaggt
ctaaaaggtgagagagggttgatgggacctccaggtgaaaagccaatcatacacataaca
ccacatatgaaagaggtcatgaagggagcaaaaggtgaccatggaaaaatgggagatact
ggcttcactggtcccagaggtacaaaaggttttccaggtgttccaggaactgagggtgaa
gatggacatccaggtgagcccagtgatgcaaaaggtactagaggttttcccggagtagaa
ggatttccagggcaaaagggattgccagggtttacaggactccctggaattgatggtttt
cctggaatgcctggacccaggggtgacaaaggcacgtctggtgcttatggacggactgga
gaatctggaatcaagggaataaaaggtgaatttggtcctaccatcagtcttccaggatca
acaggactgagaggtgaaactgggcttcctggaccttttggtgtgaagggactcataggt
aacactggagaaagaggaagtcctggttttgatggcattgaagggatgaaaggctatcca
ggagaagctggaaaagttgggctatcaggctctgacggcctacaaggtttcccaggaacc
cagggtcagaagggctggcctggcgtgcctggacaggcaggagcccctggagtccaaggc
caaccaggacaaaaaggatttcctggccttaaaggcatttttggattggatggcctaaaa
ggtcaaaagggtatcatgggtgttgcaggttctgacaacttgggtccttctggcgagcca
ggagcaaaaggagagagaggagagactggcgtccccagcacagaggctggtgtccccgga
gaggctggattcaagggtttcattggagatccaggtaataagggtgaatctgggcgtcct
ggtgtaccggggcctcagggtcaacaaggattctctgatagaaaaggagtgcaaggcgac
tatggctttccaggcccacaaggacttccaggttttcctggtcccagaggcatcccaggt
gactcatctccatttggtgcaaaaggactgaaaggaaatccaggtgatttcggatttact
ggagaaaaaggagtccagggggacacaggagaagaaggaccatcaggggaacctggagtg
tcaggaagaaaaggtgaaaaaggagaaccaggaatgatgggaatcccaggaaggcgtggt
tttgaaggcgactggggccctgttggacctaaaggagataccggacccccaggttttcct
ggcttacctggtgctaaaggacgtccaccagttccacagaaactaccaggggagagagga
ccacatggctcaatgggtattcaaggaccacagggacggaatggaaacccaggccctgct
ggacctcctggtgatcgaggggttttgggtccaaagggtgaaaaaggcatgccaggtctc
cctggaataccaggaaatccaggcttccgtggagaatatggacaattgggccaccctggt
ctacaaggcgaagaagggacccaagggggccctggtttacctggtcctatcggaatgcct
ggccgcagtgtcaatgttggctacctgctggtgaagcacagtcagtctgagcagatcccc
atgtgccctgtgggcatgtccaagttatgggacggttacagtcttctgtatttcgaggga
caggagaaggcccacaaccaagatcttggtctagccgggtcatgtctcccccgatttaac
accatgcccttcctgtactgcaatcctggagatgtgtgctactatgccagccgcaatgac
aaatcctattggctgtccaccaccgcaccaattcccatgatgcccgtggaggagaccgac
ataaaaccatacatcagccgctgctcagtgtgtgaagctccatctgtggccatcgccata
cacagtcaagatataacaatcccacagtgcccagcaggctggagaagtctctggattggc
tattccttccttatgcacacggctgctggagatgaaggtggcggtcagtctctggtgtct
ccaggctcctgtctagaagatttccgcaccactcccttcatcgagtgcaacggggccaag
ggtacgtgccactacttcgccaacaagcagagtttctggttgacatctatcgatgagacc
ttccagagttccccttcctctgagacactaaaagccggtcagctcttggcgcgcatcagc
cgctgccaagtgtgtatgaagaacctgtga
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integrated database retrieval system
