Onychostoma macrolepis: 131547194
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Entry
131547194 CDS
T09350
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131547194 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131547194 (prpf40a)
Spliceosome [BR:
omc03041
]
Complex A
U1 snRNP components
U1 related factors
131547194 (prpf40a)
Complex B
131547194 (prpf40a)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
131547194
NCBI-ProteinID:
XP_058643563
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Position
09:24747740..24780490
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AA seq
879 aa
AA seq
DB search
MKSSTDANSGPSQAPPFPGVPPSGIPPPFMGPPGIPPHFPPMGMPPMGQRPPSMAPMPPG
IMPPMIPPMGAPPMAQMPAMMPPMMPGMMMPPRMPAASIQPTGPPGVSPVESAAPAAPGT
TSTTSTESSPDEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCP
WKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTADVVAPGTTPALTSQSE
SSVTVVAVAETEATMATVATEEQPSHVPAQVAEVSSDVTVNSTEETPSVETQPSNDVSKE
ERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYSALPKLSEKK
QAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFGDQEVWSC
VPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLL
DNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNREAFQKFL
DELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYHDEKRI
IKDILKDKSFLVEINTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKE
EARKMKRKEAAFKSMLKQATPPLEPEATWEGVRERFLKEPAFEDITLESERKRIFKDFMH
VLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDEYHSKKKKRSASKSPSEHSSS
GESERSYKKSKKHKKKGKKRRHKSASPESEGEKERKGREKEKDKENDKSKGKLRGESKQK
SPKRKSTKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctcgactgatgctaatagtggccccagtcaagcaccaccttttcctggtgta
ccaccttcaggaatccccccgccctttatggggccaccaggaatcccgcctcacttccct
ccaatgggaatgccacccatgggccagaggccgcccagcatggcccccatgccaccggga
atcatgccccccatgatacccccgatgggagctccgcccatggcacagatgccagccatg
atgccaccaatgatgccaggaatgatgatgcccccccgtatgccagctgcatcaatccag
cctacgggaccgcctggtgtgagtccagtggagtctgcagcaccggctgctcctggaaca
acaagcaccacatcaaccgagtcttcacctgatgaacagccgaaaaagaagtcagtatgg
accgagcacaaatcactggatggaaaaacatattactacaacacagagaccaaacaatcc
acctgggagaaaccagatgaactcaaatcacctgcagagcaaatgttgtccaaatgcccg
tggaaagagtataagtccgataccggcaagccctattactacaactcacagaccaaagag
tctcgctggactaaacccaaggagctggaggacctggaggcgatgataaaggcagaggaa
aacgggacggctgatgttgtggctcctggcaccacccctgctcttacatctcagagcgag
tcgtctgttaccgtggtggcagttgctgagactgaggctaccatggcgacagtcgccaca
gaggaacagccatctcacgtgcctgcgcaggttgctgaggtcagcagtgatgtcactgtt
aactccactgaggaaacgcccagcgtagagacacaacccagtaatgatgtttctaaggag
gagagacctgagctggtgaagaaagtttacaagtggaacacaaaagaggaggcaaagcag
gcatttaaagaactgctgaaagaaaagggcgtttcctccaatgcatcatgggagcaggca
atgaagctgataattaacgaccctcgttatagtgctctgcctaagctgagtgaaaagaaa
caggcgttcaatgcttataaagtccagacagagaaagaggaaaaggaagaagccagaatc
aaatacaaggagtctaaagagactttccagcgcttcctggagaaccacgagaagatgacc
tcaaccacacgatacaagaaagcggagcagatgtttggcgatcaggaggtgtggtcatgt
gttcccgagagagacaggctggagatctacgaagatgtgctgttttatttagcaaagaaa
gagaaggaacaagccaagcagctgaggaagaggaactgggaagctctgaagaacattttg
gacaatatggccaatgtgacatacagaactacgtggtctgaggcacagcagtacctactg
gataaccccacctttgctgaggatgaggagctacagaacatggacaaggaagatgcactg
atctgtttcgaggaacacatccgtgctcttgagaaagaggaggaggaagagaaacagaaa
actctgctgcgagagagacgcagacagcgcaagaaccgagaggctttccagaaattcctg
gatgagcttcacgatcacgggcagctgcactccatgtctgcctggatggagatgtaccca
accgtcagcgctgatatccgcttcaacaacatgctgggccagccaggctccacccctcta
gacttattcaagttttatgtggaggatctgaaagctcgttatcatgatgagaagagaatc
attaaagacatcctgaaggataagagcttcctggtggagatcaacacaggctttgaggag
tttggctcagtgatcagctcagataaacgcgccaccacgctggatgcaggaaacatcaaa
ctggccttcaatagtttgctggagaaagctgaagcacgtgagagggagagagagaaggag
gaggccaggaagatgaagagaaaggaggcggcgtttaagagcatgctaaaacaggccacg
cctcctctagagcctgaggccacatgggagggagtacgagagcggtttctaaaagagcct
gcgtttgaggacatcacgctggagtcagagaggaagaggatattcaaagacttcatgcat
gtgctagagcacgagtgtcaacatcatcattcaaagactaagaaacactcgaagaaatcc
aagaaacaccacagaaaacgttcccgatctcgatcaggctcagagtcagaggatgatgag
tatcactcgaagaagaagaaacgttcagcttctaaatctccatccgagcactcgtcctct
ggggaatctgagagaagctacaagaaatctaagaaacacaagaagaagggaaagaaaaga
cgacacaaatcagcatcccctgagtctgaaggagagaaagagcgaaaaggaagagagaaa
gagaaggataaagagaatgacaaatccaaagggaagttacgtggagaatccaaacagaaa
tcccccaaaagaaagagtacaaaagaagagggtggatgggatacgtctggaagcgagctg
agtgaaggagagctggaaaagaggagacgcactctcctggagcagctggacgcaccataa
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