Onychostoma macrolepis: 131547228
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Entry
131547228 CDS
T09350
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131547228 (rnf17)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131547228 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
CYP38_PsbQ-like
CP12
FYVE
zf-C3HC4_4
Mei5
Motif
Other DBs
NCBI-GeneID:
131547228
NCBI-ProteinID:
XP_058643612
LinkDB
All DBs
Position
09:20792844..20821283
Genome browser
AA seq
1529 aa
AA seq
DB search
MKQVAQTVVLWKMSETAVACNICGSSYTLPEDEVGGNLPHVLLCSHIFCSTCLRALKSPQ
NVITCPECQMDTRIEEEVDGLEVDSRIIGLIYTARMNTKKGVTVSRHSGDRCKSQRFKSP
PSSAAVHTQENIEGRPDVVKVLDEALGKATENLSQLDKLHKTLSSGIHAQLRKERTRIIR
EIDEAVEKAKGILQKRRSMLVSKLSDVDLLFTDGRRECKRIEERIKELQTAIQKARHVRQ
VPSLEAYCNLDKILETLHIPVDAKSYDMSSMSLRSGLSCNFQMDSLVDSLRNCLKITDDT
DDCILEVTVEPLQHVVKSGVEVWDSTSQSVRGNADPIPKKKSTRRPNFIEEIMEDTDTSS
EIVEIAHSSPGPEPRRNERHKALRRHRRQHFDRPVTPQPKLVHYVIATHIVNPGHFYVRY
MMEQKSGLKLTKKVNEFCSGDSSLFTFSDEIKMGSMLFIYWKEDMWCRVTVTELFQKECF
QSVTKCLASEVTRLCVYFQDFGFSKGISIPSDGGLSMLNECLRRPDAATLAEMNGWAPLA
IKCSLKDIIPADLVRGWSLEAADEMRSLLGSEAVEMQVFGEDGDALLVDLKKTPMVSLRE
HLVFMELARFYSPIVAPGSAPLLFYPSVHPALNVEANAMVSHVNTPSDFYVQLVENMEYL
LLHSKLQDCYSRPQANSEFQIYCPSLSQACVASYDQEWCRVQVMGFPGGRMVEVRYVDFG
YRKTLSVKDLRQIKDEFFALPEMALWCSLNDVVSPQETWSDEACVVFKELVEHKLITVVA
KKLVPGTRPVPVCLYEIGDDCTGASIGEILVRNGLAVSSKQSQIKDAQPLETTVWDPPFE
EPLSVVLTPPGSEELKPSLILPTCVKDIKVRVTHVTSPGNICAQLLQFDGQLKRIHDMLK
SLFSKSEPQEMLWEAEMFCAANNTGVWERGKVCSVSTNGVAEVLRCDFGNKVNLHVNNLR
PLSPDLIGSFLLECNLSGVRPAGGRSTWTATACDFISHYLTGAMAVMTIKDPSARPVLVS
LFCSNRAGQNVSFGDFLISEGLALKERKAACISETVFSEECVLSEKIPEPQRITSLPQTP
PTPTPRINPPPERVQTNSYPPPELPPCGYALMSISAISEQGVIYAMTHQAVCEFDRLRER
LQQHIKTLPRQKNYNWKGVLGCAVMGTDMFWYRGQVQEVIGGHVKVQYVDQGLVESIPVC
HVYPMVLCEDVPQLCVPCQINGVIPIGKGWQWDAVVFMKELLLGRSVSVHIIEHPEDPCG
CVKVEIMVDGMALSKIMVHHQYASFDPAISSQEDYVVKPPVPDLDDWDLNTEGLEEPQPV
LGVYKELQIPKARKYFPVRVKHIRTPNEVFLCVLDKSLCEQEQEESLEEALECLNENIEN
LSLLTDFPIECPCLAEYSDGKYYRAKLLGFSQLTPSVKLLVRHVDFGSDDILPTQKLRQL
PASLHHFPCAAVYVKLAGFKPTNVCEESERIPYRPEWSMRAMMEMIDLLNGELTAVVTAT
EPQLTVLLYNAEGTLVHIPLVVKGLADYA
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggtcgcacagactgtagttttgtggaaaatgtcggagacggcggttgcttgc
aatatctgtggctcatcttacacattacctgaagatgaagttggggggaatcttcctcat
gtgttgttgtgcagtcatattttctgcagcacatgcctgcgcgcgctcaagtccccgcaa
aacgtcatcacgtgtcccgaatgtcagatggacaccagaattgaggaagaagttgatggt
ttggaggtggacagcagaatcattggcctcatctatacagcacggatgaacacaaagaaa
ggggttactgtcagcaggcactctggagacaggtgtaaatctcaaaggtttaagagccca
ccgtcatcggcagccgtccacacacaggagaatattgaagggaggccagatgttgttaaa
gtgttggatgaagctcttgggaaagcaacagaaaacctcagtcaacttgataaacttcac
aagactctttccagtggtattcatgctcaactgaggaaagagagaactcgaataatcaga
gaaattgatgaggctgttgagaaagcaaagggtattctgcagaaaaggcggagtatgttg
gtgtcaaaattgagtgatgtggatctactcttcacggacggtcggagggaatgtaagaga
atagaagagagaataaaggagctgcaaacagccatccagaaagctcggcatgtccgacag
gttccttctctggaggcctattgcaacctagacaagattttggagacactacacattcca
gtggatgctaaatcatacgacatgagctctatgtcattgcggtcaggactcagctgcaat
tttcaaatggacagtcttgttgacagtttgagaaactgtcttaaaattacagatgacact
gatgactgtattttagaagttacagtggagcctctccaacacgtcgtgaagagtggtgtg
gaggtctgggacagcaccagtcagtctgttagaggaaatgcagaccccattcccaaaaag
aaaagcacacgcaggcccaatttcatagaggaaataatggaagacacagacacttcttca
gagatagtggaaatagctcatagttccccaggacctgaaccaaggcgcaatgaacgacac
aaagcacttagaagacatcgcaggcagcattttgataggcccgtaactccacagcctaaa
ttggtgcactatgttatcgcgactcacattgtgaaccctggacatttctatgtacgctat
atgatggaacagaagtcaggcctcaagttgaccaaaaaggtcaacgaattctgctcagga
gacagtagcctcttcacgttcagtgatgaaatcaagatgggctctatgctctttatctat
tggaaggaggatatgtggtgtagggtaacagtgactgagctctttcagaaagagtgtttc
cagagtgtgaccaaatgccttgcatcagaagtcactcgtctgtgtgtctacttccaggac
tttggcttctccaagggcatttcaattccaagtgatggaggtttaagcatgttgaatgag
tgtctgcggagacctgatgctgctactctggctgaaatgaatggctgggctcctctggcc
atcaaatgctcccttaaagatattattcctgcagacttggtgagggggtggagtttagag
gcagctgacgagatgaggagcctgctgggatctgaggctgtggagatgcaggtgttcggt
gaggatggagatgcactgttagtggatctgaagaaaacgccaatggtatctctgcgggag
cacctggtgttcatggagctggccagattttactctcctatagtcgcccctggcagtgca
cccctactcttctacccatcagttcaccctgcactcaatgttgaggccaatgctatggtt
tctcatgtgaacacaccgtcagacttctatgtacaactagttgaaaatatggagtacctg
ctgttgcactcaaagctccaggactgttacagtcgtccccaggcaaacagtgagttccag
atctactgcccttctctctcacaggcctgcgtcgctagctatgaccaagaatggtgcagg
gttcaagtcatgggtttccctggtggtcggatggttgaggttcggtatgtggactttggc
tacagaaagactctgtctgtgaaagatctgagacagataaaggatgagttctttgctttg
ccagaaatggccttgtggtgcagtctgaatgatgtggtcagtccgcaggaaacatggagt
gatgaagcctgtgttgtgttcaaggaacttgtggagcataaacttatcactgttgtggcg
aaaaagcttgtgcctggcactagaccggtgcctgtgtgtctgtatgagattggtgatgat
tgcactggagccagtattggagagatactggtcagaaatggtctcgctgtttccagtaaa
cagagccagattaaagacgcccagcccttggagacgacagtatgggaccctccatttgaa
gagcctctgtctgttgttctgactcctcctggttctgaagagctgaagcctagcctgatt
ctgcccacatgtgtcaaagacatcaaagttcgtgtgacacatgtcacctctcctggaaac
atctgtgcgcagctgctgcagtttgacggccagctgaagagaatccatgacatgctgaag
agtctcttctcgaagtcagagccacaggagatgctctgggaagcagagatgttctgtgct
gccaacaacactggcgtttgggaaagaggaaaagtgtgcagtgtgtccactaatggtgtt
gcagaggttttgcgttgtgacttcggtaataaagtgaatctccatgtaaacaatctcaga
ccactcagtcctgatctgatcggatctttcttactcgaatgtaacctcagtggtgtaagg
ccagctggtggtcgctccacatggacagccacggcgtgtgacttcatctctcactacttg
accggtgccatggctgtaatgaccataaaggacccatccgccaggccagtgctggtgtct
ctgttctgttcaaaccgtgctggtcaaaatgtcagtttcggtgatttcctcatcagtgaa
ggacttgctctaaaggagagaaaggctgcttgcatatccgagacagtcttctcagaggag
tgtgtgttgagcgagaagattcctgagccacagagaatcacgagcctacctcagacacca
cccacacccacccctcgcatcaacccaccaccagagagagtgcagacaaactcatacccc
cctccagagctgcctccctgtggatacgcactcatgagcatctcggccatctccgaacaa
ggtgtcatttacgcaatgacacaccaagcagtgtgtgagtttgatcgcttacgggagcgg
ctgcaacagcacattaaaaccctgccaagacagaagaactacaactggaaaggagttttg
ggatgtgctgtcatgggaactgacatgttctggtacagaggtcaggttcaggaggtcatt
ggaggacacgtgaaggtccaatatgtggatcagggacttgtggagagtatcccggtttgt
catgtgtacccaatggttctctgtgaggatgtgccgcagctctgtgtgccctgtcagata
aatggagtcataccgattgggaagggatggcagtgggatgctgtggtgttcatgaaggag
ttgctacttgggcgttcagtcagtgtccacattattgagcacccagaggatccatgtggc
tgtgtaaaggttgagataatggtggatggaatggcacttagcaagataatggtgcatcac
caatatgctagttttgatcctgccatcagcagccaggaggattatgtggtgaagcctccc
gtccctgatttggatgactgggacctaaacaccgaggggttggaggagccccagcctgta
ttaggtgtttataaagaactccagattcctaaagcaagaaaatatttccctgtcagggtc
aagcatatccgcaccccaaatgaggtgttcctgtgtgtgttggataagagtctgtgcgaa
caggagcaggaagagagtttggaggaagctcttgagtgtttgaatgagaatatagaaaat
ctgagcctgctgacagacttccccattgagtgtccctgtctggctgagtacagcgatggt
aaatattatcgtgcgaagctactgggtttttctcaactcactccttctgtgaaactcctt
gtgagacatgtggattttggttcggatgacatcttaccaacacagaaattgcggcaactc
cctgcatcccttcatcatttcccatgtgcagcagtttatgtcaagttagcaggcttcaaa
ccgacaaacgtgtgtgaggagtcggagaggataccttaccggcctgagtggagtatgaga
gccatgatggagatgatcgacctgttgaacggagagctcactgccgtggtcactgcaact
gaaccacagctgactgtactgttatacaatgcggaagggacactcgttcacatacctctt
gtggtgaaaggcctcgctgattatgcataa
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integrated database retrieval system
