Onychostoma macrolepis: 131547253
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Entry
131547253 CDS
T09350
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131547253 (smarcal1)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131547253 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
DEAD
Motif
Other DBs
NCBI-GeneID:
131547253
NCBI-ProteinID:
XP_058643675
LinkDB
All DBs
Position
09:2989962..3005740
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AA seq
804 aa
AA seq
DB search
MSVSLTPEQQRRIEENRQRALARRAEKQAQLTPGSAQNKTQPPSAESANNSQLFASDRAH
PGAPGQGARQTQLIDTKGPCTKTATSNAASATLSFYGQSSKPPTGEKRPAKLPEAGGSVP
AKKPAVSVKGKCKSHSENRFRVEVGYYADLIAVFKSIPSKNYDPTTKMWNFSLEDYQMLM
EQAAGLPSVSLKPLDGMEGLNISASTSRPKDAAALAALMRLCQGWQKPGATVKGKCVLVS
RCRLEVDIGYQADVIEIFKKMPSKNYDMKTRKWSFLLEDYGQLMVELSELPMVEIEPLPA
AVLLSFSSQFEKSESRAPVPPEADLSHVDPHLTRSLMPFQRDGVNFAVSREGRLLLADDM
GLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSVRADSINVVVTGRDSLR
SGLINIISYDLLNKMDKQQPSSPFSVIIMDESHFLKNMKTVRCRAALPLLKTAKRVILLS
GTPAMSRPAELYTQILAVRPSLFPRFHDFGTRYCDAKQLPWGWDYSGSSRLSELKLLLEE
SLMLRRLKSEVLSQLPAKQRKVVTVTTDGINSRTKAALNAAAKELARGYHNKSQEKEALL
VFFNHTAEAKIRAIVEYISDMLECGREKFLVFAHHKLVLDSITKELGEKGISYIRIDGST
ASAERQQLCDRFQSSQRSCVAVLSITAANMGLTLHAADLVVFAELFWNPGVLIQAEDRVH
RIGQTSNVDIHYLVAKGTADDYLWPMIQEKMNVLEQVGLSESNISEKAESASFHSKDPHQ
LTITEMFQRSFDEEEMLALVDQDQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagtctgactccagaacagcagcggaggatagaagagaacagacagcgagct
ctggccagaagagccgagaaacaggctcaactgacacctggatctgcccaaaacaaaaca
cagcccccctctgcagagtcagcaaacaacagccagctgtttgcatccgatcgagcacat
cctggggcccctggtcaaggagcaagacagactcagctcatagacactaaaggaccctgt
acaaagacagcaacctccaatgctgcatctgcaactcttagcttttatggacagtcaagc
aaaccacccacaggagaaaagcggccagctaaactccctgaagcaggaggaagtgtccct
gcaaagaagccagcggtgtccgtgaaagggaaatgcaagtcacactcggaaaatcgtttc
cgagtagaggtcggctactatgcggacctcatcgctgtattcaaaagcattccctctaag
aactatgatcccactacaaagatgtggaacttcagccttgaggactaccagatgctgatg
gagcaggcagcgggtctcccctccgtctctctcaaacctctggatgggatggaagggctg
aatatctcagcgtccaccagtcgacccaaagatgcagcagccctggcagctctgatgagg
ctctgtcagggttggcagaaaccaggtgccacagtaaaggggaagtgtgttttagtgtct
cgctgtcggttggaggtggatattggataccaggcagatgttattgaaatcttcaagaaa
atgccatccaaaaattatgacatgaagaccagaaaatggagtttccttttggaggactac
gggcagctcatggtggaactgagtgaactgcctatggtggagatcgagcctttacctgct
gctgtgctgctgtccttctcctctcagtttgagaagagcgagtccagagctccagttcct
cctgaggccgatctctcacacgtggatccacatctcacacgcagcctcatgcccttccag
agagacggggtcaattttgcagtgtccagagagggccgtttgctcctggctgatgatatg
ggtctgggaaagacagttcaggccatctgcatcgctgcgtactacaggagtgagtggcct
ctgctggtggtcgctccgtcctcagtgcgcttcacgtgggctgaggctttccgccgatgg
ctgccatccgtcagagccgacagcattaatgtggtggttacaggcagagacagccttcgc
tccggcctcatcaacatcatcagctacgacctgctcaacaagatggacaaacagcagccg
tccagccctttcagtgtcatcattatggacgagtctcacttcctaaagaacatgaaaacg
gttcgctgtcgggcggctcttcctctgctgaagaccgctaagagagtgatcctgctgtcg
ggaacgcctgccatgtccagacctgctgagctctacactcagatcctggctgtgaggcct
tctctgtttccacgcttccatgactttggcacacgctactgtgatgccaaacagctgccg
tggggctgggattactccggctcgtctcgtctgagcgaactgaagctgctgctggaggag
tctctgatgctgcgccgcctcaaatcagaggtgctctcgcagcttcccgccaaacagcgc
aaggtggtcacagtgacgacggacggcatcaactctcgcaccaaagctgctctcaacgcc
gctgccaaagagctcgccagaggataccacaacaagtcacaagagaaggaagctctcctg
gttttcttcaaccacacagcagaggccaagatcagagccatcgtggagtacatctcagac
atgctggagtgcggacgagagaagtttctggtgtttgctcatcataaactggtgctggac
agcataaccaaagaactcggtgagaagggaatcagttacattcgtatcgatggctcgacg
gcgtcggcggagcgacagcagctgtgtgaccgcttccagtcgtcacagaggagctgcgtg
gctgttctgtccatcaccgccgctaacatggggctcacgctgcacgcagccgacctcgtg
gtgttcgccgagctcttctggaaccccggagtcctgattcaagcggaggaccgcgtgcac
aggattggacagaccagtaatgtggacattcattacctggtcgctaaaggcaccgcggat
gattacctttggcccatgatacaggagaaaatgaatgttttggagcaggttggtttgtct
gaatccaacatttcagagaaggcagaatctgccagctttcacagcaaggaccctcatcag
ctgaccatcactgagatgttccagaggtcctttgatgaggaggagatgcttgctttagtt
gatcaagatcaatga
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