Onychostoma macrolepis: 131547364
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Entry
131547364 CDS
T09350
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131547364 (sox1a)
Transcription factors [BR:
omc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131547364 (sox1a)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
131547364
NCBI-ProteinID:
XP_058643879
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All DBs
Position
09:15937464..15940391
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AA seq
336 aa
AA seq
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MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPAGVGQRLESPGGHGGSAGAGYAHMNGWANGTYSGQVAAAAA
AAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASP
SGYGGISYTQHQNSSVASSAAIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREMISMYLP
TGESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggaccttcattccccgggaccccaaaccaacacgaat
ccggggcaaacgggtccaaactcggggagcaaagccaaccaagaccgcgtaaagagaccc
atgaacgcttttatggtctggtcccgaggccagcggcgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaggtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgcgccatgcacatgaaggag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggctggcggcttgctcggcggcgcgggtggcggggtcgggatgagccctgca
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccggcgctggctac
gcgcacatgaacggctgggcgaacggcacttactcgggccaggtggccgccgcggcagca
gcggcagcgatgatgcaggaggcgcagctcgcctacagccagcacccaggcagtgggtct
caccatcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgctacgat
atgactgctctccagtacagccccatctcgaactcccagagctacatgagcgcttctcca
tccggctacggtgggatatcatacacgcagcatcaaaactccagcgtcgcttcttctgcc
gccatcggtacgctgagctcgctcgtcaagtccgaacccaatataagccctccggtgacc
acacactcccgaggcccctgccccggagacttgagagagatgattagcatgtatttaccg
accggcgagtccggggatccgtctgtgcagagcagactgcatgccttaccgcagcactat
cagagcacaactgccggagtaaacggaactgtcccattgacgcatatttga
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