Onychostoma macrolepis: 131547428
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Entry
131547428 CDS
T09350
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131547428 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131547428 (mid1)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131547428 (mid1)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131547428 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PRY
zf-C3HC4_3
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
131547428
NCBI-ProteinID:
XP_058643956
LinkDB
All DBs
Position
09:2241373..2289279
Genome browser
AA seq
675 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCPTLDESSKPYSAFQCPTC
RYVITLDQQGLDGLKRNITLQNIIDRFQKASLSGPNSPSETRRCSRDPFPSVDDGRVMSS
PSEAVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDSRLRG
LACPEHGEEKVNMYCVTDEQLICSLCKLVGHHREHQVAALGERFDKLKHMLDSNLSNLIK
RNSELENLMAKLIQTCQHVEHNAAHQESKLAEECDTLINIVQQRRQIIGTKIKEGKVVRL
RKLAQQIANCKQFVERSSSLITQADLVLKETDHARFLQTAKSISERVSMATASSQILIPE
INLNDTFDAFALDFSREKKMLEGLDYLTAPNAPTIREELCTASYDTITVHWTSEDEFSVV
SYELQYTISTGQTNVVSLCNSMDSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAMNQAGSR
SSPPAKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDEASSMKSHAQDRFGSTGNYGVTG
NVFIDSGRHYWEVLIGGSTWFAIGIAYKSAPKHGWVGKDSASWVLSRCNTSWAVRHNSKE
FPIEPSPHMRRLGVLLDYDSGSLAFYDAAGTQHLYTFDIAFSQPICPVFSVWNKCLTVLT
GLPIPDHLEISDPRD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgcccaatctgtctggagcttttcgaggatcct
ctactgttgccctgcgcccacagcctgtgcttcaactgcgcccatcgcattctagtgtcc
cactgtcccacgctcgacgagtccagcaaaccctactccgccttccagtgtcccacctgt
cgctatgtcatcaccctcgaccagcagggtctagacggcctcaagcgcaacatcactttg
cagaacatcatcgaccgcttccagaaggcgtctcttagcgggccgaactcaccgagcgag
acgcgccgctgcagccgcgatccgttcccctcggtggatgacggcagggtcatgagttcg
ccgagcgaagccgtccagtgccagttctgcgagcaggatccgccgcaggaggcggtcaag
acctgcgtcacctgcgaggtttcgtattgccaggaatgcctgcgcgccactcaccccaac
aagaagcccttcacgggacaccggctcaccgaacccgtgccggactctcgcctcagagga
ctggcctgtcccgagcacggagaggagaaggtcaacatgtactgcgtgacggacgagcag
ctgatttgctcgctgtgcaaactggtcggacatcaccgtgaacaccaggtggcagcgctg
ggagagcgattcgacaagctgaagcacatgttggattccaacctcagcaatctgatcaag
aggaacagcgagctggagaacctgatggccaagctgatccagacgtgtcaacatgtggag
cacaatgcggctcatcaggagagcaaactggcagaagagtgtgacacactgataaacatc
gtacagcagaggagacaaatcatcggcactaagatcaaagaaggaaaggtggttcgcttg
agaaagctagcgcaacagatcgctaactgcaagcagttcgtggagagatcgtcctcgctc
atcactcaagccgatctggttctgaaagagacggatcacgctcgattcctgcagactgca
aagagcatctcagagcgggtctcgatggcgacggcgtcctcacagatcctgatcccagag
atcaacctgaacgacacgttcgacgcgttcgcactggacttctccagagagaagaagatg
ctggagggtctggattaccttacagctccgaatgctcccactatccgcgaggagctctgc
acggcgtcttacgacaccatcaccgttcactggacatcagaagatgagttcagcgtggtt
tcatacgagctgcagtacaccatctccaccggccagactaacgtcgtcagtctgtgtaac
tcgatggacagctggatgatcgtgcccaacattaagcagaatcactacacggttcacggc
ctgcagagcggcaccaagtacatcttcatcgtgaaggccatgaatcaggctggaagccgc
agcagcccgccggccaaactcaagaccaacagtcagccgtttaagctggacccaaagtcg
gcccacaggaagctgaaggtgtcacatgacaatctgacagtggagcgggacgaagcctcg
tcgatgaagagccacgctcaggaccgcttcggcagcacggggaactacggcgtgacgggg
aacgtgttcatcgacagcggccgccattactgggaggttctgatcggaggaagcacatgg
tttgctatcggtatcgcctacaaatcggctcccaagcacggctgggtcggtaaggactcg
gcatcatgggtattgagccgctgcaacacctcgtgggccgtgcgtcacaacagtaaagag
tttcccatcgagccgtctcctcacatgcggcgtctgggcgtcctgctcgactacgactcc
ggctctctggcgttttacgacgccgctggaacgcagcacctgtacaccttcgacatcgcc
ttctctcagcccatctgtcccgtcttcagcgtgtggaacaagtgcttgaccgtcctcact
gggctccccatcccggaccacttggagatcagcgacccgcgcgactga
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