Onychostoma macrolepis: 131547543
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Entry
131547543 CDS
T09350
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131547543 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
omc04515
]
Cadherins
Protocadherins
131547543 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
131547543
NCBI-ProteinID:
XP_058644182
LinkDB
All DBs
Position
09:complement(2368176..2375606)
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AA seq
988 aa
AA seq
DB search
MERGLLFTRILGGTLICISLVSQVVSEERTVRYKIYEEVRPPTVIGTLASNVTWTPDKTR
RTFPGIRFKLMSPSTGSFIRFRESDGRLTVEERVDRERICKRNPRCVITFDVAFVSAEQF
ELFHVEVEVLDVNDNSPVFPRTDCTVEISESAALGTRVALDAAEDADVGSNSIQTYHLSE
NAHFSVDVITRVDGVKYAELVLVKELDRESRAFFALKLVAADGGNPAKSGATNVTVKVKD
ANDNSPLFDHSHYSVDVPEDTPVDSLLLDLNAVDPDEGLNGQVVYEFGKQVTTKIRQLFK
LDYKTGHLTLQNPVDYEDETTYEIDVQASDLGHNPVPSMCKIIINIRDVNDNPPEIIITS
ITSVTDGVAHVSEATGPDILVALISIKDKDTGANGQVSCTLNGGHGNFRLKRAYEGSYTI
VTMAPLDREKIAEYNLTVVAEDFGVPPLRTVTHYIIRLTDVNDNAPTFSAKIYEGFIEEN
QLPGTYITTILASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKR
LDLRVQASDRGWPQLHNNAVLIIKVVDQNDNAPSIMQPPLVNGSAEIQLPRDAPPGYIVT
RIAAKDSDAGLNAELTYKLYDGGDFGFAIDPNTGEIYINRKIAYDEYDLWKVLVTVNDNG
HPSLTSTATIHFTVTESAPSNGNFYDEREDGEPKQWTLILILALTSSSLLFLAILSYILC
KSRKNGQKRQANLPDTVDIPYDKEHNAVSMISSQTANVFDTHAFHSTTVIGTPEKLHNSV
QATAEVFNENPQTFKSKYRSVAGEIDGYSTLPGYGKDNARPITVWKGNSMMTIAVRDPQI
SGKDSGKGDSDVNDSDSDISEGLKKDYTSYKGLWACTSECRILGHSDRCWSPSVSRTSGN
VNSRHLSTFSRTRPSSQATLQRSSYDTQTNRSVALHSLTEDQQSQYDYIHICSPQSQRRQ
DSENIDMQVFTHSTKPIATESPGRFTQA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggacttttattcacgcggatacttggaggtacgctgatatgcatttcgctt
gtgtcacaggtcgtttctgaggaacgcacggtgaggtataagatatacgaggaggtccga
ccgccgacggtcatcggaactctagccagcaatgtaacctggaccccggacaaaacgcgc
aggactttccccggaatcaggtttaagctcatgagcccctccaccggctccttcatccga
ttcagggaaagcgacgggaggcttaccgtggaggagcgcgtcgaccgcgaacgcatctgc
aagcgcaacccgcggtgcgtaatcacttttgacgtcgcgttcgtgtccgccgagcagttt
gagctctttcacgtcgaggtggaagtgctggacgtaaacgacaactcaccggtgttcccg
cgcaccgactgcaccgtcgagatctccgagagcgcggcgcttgggacgcgcgtcgcgctg
gacgccgccgaggacgcagacgtgggctctaactctatccaaacctaccatctgagcgag
aacgctcactttagcgtcgatgtcataacgcgggtggatggggttaaatatgcggagctg
gtgcttgtcaaagagctcgaccgcgaatcccgcgcttttttcgcgctcaaactcgtggcg
gcagacggcgggaatccggcgaaaagcggcgccactaatgtcaccgtcaaagtgaaggat
gctaatgacaacagcccgctgtttgaccacagccattactctgtggatgtgccagaggac
acccctgttgattcgctactgcttgacttaaacgctgtcgatccggacgaaggtctcaat
ggacaggttgtttatgaatttggcaaacaagtcacaacaaagatcagacaactatttaaa
ctggattacaaaactggacatttgactttgcagaaccctgtggattacgaagacgagacc
acgtatgaaatcgacgtgcaagccagcgatttaggacacaatcctgtgccctcgatgtgc
aaaatcatcatcaacatcagagatgtgaacgacaacccgcctgaaatcatcatcacatcc
attacgtcagtaacagatggcgttgcgcatgttagcgaagctacaggtccagacatcctg
gtggctttaatcagcatcaaagacaaggacactggagctaacgggcaagtgagctgcact
ctgaacggtggacatggaaacttcaggcttaaaagagcgtatgaagggagctacacgata
gtcacgatggctcctctggatagagagaagatcgcggagtataatttgactgtagtggct
gaggatttcggcgtaccgccgttacgcacggtaactcattacattatacggcttacagac
gtcaatgacaacgcgccgacattcagcgctaagatatatgaaggtttcattgaggagaat
caacttccaggtacctacatcactacgattttagccagcgatcaggattctgggcttaac
ggggaaataacctatgagctttttgactcggacaccaacagcgtctccaggtttgctatt
atgaatcaagcggggaacgtttacgccttgcaaagttttaattacgaagtcacaaagcgg
ctagatcttcgcgtccaggccagcgaccgaggatggccgcaacttcacaacaacgctgta
ctgattatcaaagtagtagatcagaacgacaatgcaccttcgataatgcaaccgccactc
gtcaacggatctgccgaaatccagcttcccagagacgcgccgcccggttatatcgtgacc
cgaatcgcggcgaaagattcagacgccggtttgaatgcagagctcacttacaaactctac
gatggaggcgatttcggtttcgccatcgatccgaatacgggggaaatatacatcaaccgc
aaaatcgcttacgacgagtacgacttatggaaagtcttagtgacggttaacgacaatggc
cacccgtcgctaacctcaacagctacgattcatttcaccgtaaccgagtctgcgccctca
aacggcaatttttacgacgaaagagaggacggcgaacctaaacaatggacacttatttta
atcttggctttgacgagttcctcactgctgtttttggctattttatcgtacatactatgc
aaaagtcgcaaaaacggtcagaagagacaagctaaccttcctgacacggtggatattcct
tacgataaagagcacaacgccgtgtcgatgatctccagccagactgccaatgtgttcgac
acgcatgcatttcactccacgaccgtcatcggcacgcctgagaaactacacaacagcgtg
caggcgacggccgaagtttttaacgaaaacccacagaccttcaagagcaaatataggagt
gtagcaggggaaatagatggatattccactttgcctggttatggtaaagacaacgctcgt
cccatcacggtatggaaaggaaactccatgatgaccatcgcagtcagagacccacagatc
agcggcaaagacagcggaaaaggagacagtgatgttaatgacagtgattctgacatcagt
gaaggcctcaaaaaagactacacgtcatataaaggtctgtgggcttgcaccagcgagtgc
aggatcctcggtcactcggacagatgctggagcccgtctgtgagcagaaccagcgggaat
gttaatagcagacatctctcgaccttctcaaggacgaggccgtcctcgcaggccacgctt
cagaggagcagctacgacactcagaccaacagaagcgtggccttgcacagccttacagaa
gatcagcagagtcagtacgattacattcacatctgctctccacagtctcagaggagacaa
gactcggagaatatagacatgcaagtcttcacacactccaccaaacccatcgccacagag
agtcccggcagatttacacaagcctga
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