KEGG   Onychostoma macrolepis: 131548056
Entry
131548056         CDS       T09350                                 
Symbol
per1a
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 1a
  KO
K21944  period circadian protein 1
Organism
omc  Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omc03400]
    131548056 (per1a)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    131548056 (per1a)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_11 PAS_3 PAS
Other DBs
NCBI-GeneID: 131548056
NCBI-ProteinID: XP_058644967
LinkDB
Position
10:13582510..13601238
AA seq 1391 aa
MSNDKFQTPVTCSTHTGKGEGETHSNASPRMTDSQSVCPGLDISTVSQPMHSDDTDAHSS
GNDSAERESEGHMGREASTCSSHNRKGSTTETTESKSSNGNSPSPPSSSVSYSLLSGSSE
QDQPTSQASSSDQPARLETQRELRKALRELKVRVPPEWRRKGRSSTLASLQYALSCVKQV
RANQEYYHQWSVEESHGCCLDLSSFTIEELDNITSEYTLQNTDTFSVAVSFLSGKVVYIS
SQAASLLRCKPERLQGAVFSELLAPQDVSTFYSSTAPCHLPPWSSCAGTTSQVDCAEEKS
MFCRISRGRDSDGEVKYYPFRLMPYQLTLRDFDTSQPEPCCLLIAERVHSGYEAPRIPAD
KRIFTTSHTPNCLFQEIDERAVPLLGYLPQDLVGKPVLIYLHPEDRLLMVAIHKKILQFA
GQPFDHSPLRMRARSGEYLTLDTSWSSFINPWSRKVAFIVGRHKVRTSPLNEDVFTALEG
GDVRTMSPDVPQLNELIHRVLVQPVHASSSQGYGSLGSSGSNEHQHSATSSSESNGHASE
DQIKSRKPMTFEQICQDMHMVKANGQQVFIDSRNRPPALKQSSLEALAKAADTAEASARE
GLASLALSSPPRKELPIVYSYQQINCLDSIIRYLESFNVPGTVKRKCGSSSCTTSSTSDD
DKQREGAVATEAETLVVTEGSKVVPAAPAHPLTPLALHCKAESVVSATSQCSFSSTIVHV
GDKKPPESDIIMMEEAPTTPIPSTSAPPTSIAFPMPVNPQQAMSPTAAVPEKEKEKERRS
GGNAGKGLTKAVLSAHTQQEEQAFLNRFRDISHLRRVQPSGPPXKRRHTSTPGTIGVNSS
QNYPSVGNSSSRRHGRGGKRRKHQVDGNTPDNPSPSVPSPYKGSNPAAVRPNLPAVQQSS
TSWPPSAASQTSGTPMMTSFPPGYMPMFPISSPFSMPQMGIDPSLQAGVPRFPMQGFPPV
MPPVMTFMLPNYMFPQLSNPGPQLNPANSQLGGQLLAQMNPLGQFPSSAVGLPSFNPTMG
QFNPLGSQMNPAMPTMIPQQIYNPNPLYTFPNFPSMPAGNTYTAPQGQSRSSTPQSIGQQ
AGEREGAGSPLFQSRCSSPLNLLQLEELQSNRTDTMQQTPPPVGGGTQGGGTVVQNSSNR
SNTKDGQLDDSPEVNESNQDAMSTSSDMLDLLLQEDSRSGTGSAASGSGSSGSGSGSYGS
GSNGCSTSGSGTRSSNTSKYFGSIDSSENDHNHKPGSKDLEGEQFIKFVLQDPIWLLMAN
TDDKVMMTYQIPIKDRESVLKEDRDALKAIQKHQPHFTEEQKKELTQVHPWFQTGCLPKA
INVTSCTGCESPPDPSILTPFDLDFHDVDLSMVLREEAKQQDQFITAETAFPLSPPSSDN
ELRANQTSTRT
NT seq 4176 nt   +upstreamnt  +downstreamnt
atgagtaatgacaaattccaaacaccagtgacctgcagcactcatacagggaagggtgaa
ggggaaacccacagcaatgcttctcccagaatgaccgacagccagtctgtttgtcccggg
ctggacatctcgacagtgtcccagccgatgcactcggatgacacagatgcccactccagc
gggaatgactcggccgagagggagagcgaaggacacatgggacgagaagcatccacctgc
agctcccacaacagaaagggttcaaccacagagactacagaaagcaagagctcaaatgga
aacagtccctcccctcctagcagctcggtttcgtatagtcttttgagtggcagctcggag
caggatcaaccgacgtcccaagcatccagcagtgaccagccggcccgattggagacccag
agagagctgcggaaggccctgcgtgagctaaaggtccgcgtgccgccagaatggcgcagg
aaggggcgatcaagcaccctagcctccttgcaatatgcacttagctgtgtcaaacaagtc
cgggctaatcaagagtactaccatcagtggagcgtggaagagagtcatgggtgttgtttg
gacctgtcgtcgtttactatcgaagagctagacaacattacatcagagtacacccttcaa
aacacggacacgttctctgtggcagtgtcgttcctctctggtaaagtggtgtatatctca
tcccaggcggcctctctgctgcgctgtaaacctgagaggctgcagggagcagttttttcg
gagctgctcgcacctcaggacgtcagcacgttttacagcagcaccgccccctgtcacctg
ccgccgtggtcctcttgcgcaggcactacctcacaggtggactgtgcggaggaaaagtcg
atgttttgtcggatcagcagaggtagggacagcgatggagaagtgaagtattatcccttc
cgtctcatgccatatcagctgaccctgagggacttcgacacgtcccaacctgagccctgc
tgcctcctcatcgctgagagagttcactccggctacgaggcacctcgcatcccagcagac
aagagaatatttaccaccagtcacaccccgaactgtctgttccaagaaattgatgaaagg
gcagtgccattattaggttacttgcctcaggacttggttgggaagccggtgcttatttac
ctgcatccagaagacagactccttatggtggccatccacaaaaaaattctccagtttgca
gggcagccatttgaccattcgcccctgcgcatgcgtgcacgaagtggggagtacttgacc
ctcgacaccagctggtcatcctttatcaacccctggagcaggaaggtggctttcatagtg
ggacgccacaaagttcgaacgagtccactgaatgaggatgtgttcactgccctggagggc
ggggatgtgagaaccatgtccccagatgtgccacagctgaatgagctaatccacagggtc
ctggtgcagcctgttcatgccagcagctcacaggggtacggtagcctgggcagcagtggc
tcgaacgagcaccagcatagtgccacttcctcctctgagagcaacggacatgcttccgag
gaccagatcaagtccagaaaaccaatgacgtttgagcagatttgtcaagacatgcacatg
gtaaaggccaacggacagcaggtcttcatcgattcccgaaaccggccgccagctctcaaa
cagagtagcttagaagcgctggcaaaagcagcagacacagcagaggcgtctgctagagaa
ggtctggcaagtttagcgctgtccagtccacccaggaaggagctgcccattgtctactca
taccagcagatcaactgtctggacagcatcatacgatatctggagagctttaatgtccct
ggcacagtgaagaggaagtgtggctcatcttcctgtacaacatcttctacctctgatgat
gataaacaaagggaaggagctgtagcaactgaagcagagactcttgtggtgaccgagggt
tcaaaggttgtccctgcagcaccagcgcaccccctaacccctctggctctgcactgtaag
gctgaaagtgttgtctcggccacctcccagtgtagttttagcagcaccattgttcacgtt
ggtgacaagaagccacctgaatcagacattattatgatggaggaggcgccaaccacccca
ataccttccacatcagccccacccacctcgatcgcttttcccatgcccgtgaatccccag
caggccatgtcccccactgctgctgttcctgaaaaagaaaaggagaaggagagaagaagt
ggaggtaatgcagggaagggcctcacgaaggcggtgttatctgcacacacccagcaagaa
gaacaagccttcctcaaccgtttcagagacatcagccatctgcggagggttcaacccagt
gggccaccanncaagcgcagacacacgtctacacctgggacaataggcgtgaacagctcc
cagaactatccttctgtgggcaacagcagcagtcgtcggcatggtagaggtgggaaaaga
cgaaaacaccaagtagatggcaacacaccagacaatccctccccctctgtacctagtcct
tataaaggatccaatcctgcagcagtaagacccaacctccccgcagtccagcaatcttcc
acttcttggccaccatctgcggcatcccagactagcggtactcccatgatgacctccttt
cccccaggctacatgcctatgttccccatttcatcacctttctcaatgccccagatggga
atagatccttccttgcaagcgggagtccctagattccccatgcaaggctttcctccagtg
atgccaccagtcatgaccttcatgttgcccaactatatgtttccacaactcagtaatcca
ggaccacagttgaacccagccaactcgcagctcggtgggcaactgcttgcccaaatgaac
cccttgggtcagttcccttcctctgctgttggtttaccatcattcaatcctacaatggga
cagttcaatccattgggctcccaaatgaatcctgccatgcctacaatgattccacagcaa
atctacaacccaaatcccctgtacactttccccaactttccatcaatgccagcaggaaac
acctatactgcaccacaaggacagtctcgctccagcacaccccagtccatcgggcaacag
gctggcgagagagaaggggccggatctcccctgtttcaatcacgatgctcctccccactc
aatcttttacaacttgaggaattgcaaagcaacagaacagacactatgcaacagactcca
cccccagtgggtggaggaacgcaagggggcgggactgtggtgcagaattccagcaatcgc
agcaacaccaaagatggccaactcgatgacagtcctgaagtcaatgagtccaaccaggat
gccatgtcgacctccagtgacatgctggacttactgctgcaagaggactcccgctcgggc
actggctctgctgcctcaggctctggatcatcagggtcagggtcagggtcatacggatct
ggttcgaatgggtgtagcacatctggaagtggcactaggagcagcaatactagcaagtac
tttggaagcatcgactcgtcagagaatgatcacaatcataaaccaggatctaaagatctg
gaaggggaacagtttataaagtttgtcctccaggaccccatctggctcctcatggcaaac
acggatgacaaagtcatgatgacataccagattcccatcaaagacagagaatcagtactg
aaagaagacagagatgccctcaaagctattcagaagcatcaacctcacttcactgaagag
cagaagaaagagttaactcaggtccacccttggtttcaaaccggctgcctaccaaaggcc
atcaatgttacatcttgcacaggatgtgaatctcccccagatccctcgattcttactcca
ttcgatttggacttccatgacgtggatctcagcatggttttgagagaagaggcaaaacaa
caagatcaatttatcactgctgaaacagcctttcccttgagcccaccttcgtctgataat
gaactgagagccaatcagaccagcacaaggacatag

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