Onychostoma macrolepis: 131548179
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Entry
131548179 CDS
T09350
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131548179 (rc3h2)
04121 Ubiquitin system [BR:
omc04121
]
131548179 (rc3h2)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
131548179 (rc3h2)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131548179 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-RING_5
zf-RING_UBOX
zf-CCCH_4
zf-RING_2
zf-CCCH_UNK
zf_CCCH_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
131548179
NCBI-ProteinID:
XP_058645266
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Position
10:complement(6457844..6494932)
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AA seq
1052 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDACSHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDVLPVNCALLQLVGAPVPEGEIVSVGSVEDTRHYEVCRICVEELALYLKPISGGKGVVT
LSQSTLSRPMQRKLVTLVNCQLVEEEGRMRAVRACRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLMHKSHMQSIIDKLQSPESFAKSVQELTIILQRTGDPANLNSLRAPLERLAGI
DHNPDAAAPSWTELESVLLAVKVVVHGLVEFIQNFSKKSNESPQAQPNSKYKTSMCRDLR
QQGGCPRGPSCTFAHTQEELEKHRMRNRKASGAARPFPSVPVVMPKTGTKGAVPGSEVKN
HEKDAPEDASPTQLIPRGGDHQEDKTLPSSANGLPAASLEQNHMSQSQSSAIASGLCTED
DCCLLKHGPVLTRAHPKIYYSQDQRPYDLSSYNQPAIPPHKSCNARFHRSSNVPESMLPP
SMGPLYPDQHPSVPPADRLGPGPYGPPSTYTSMSHAHSMYTPVYDSRRVWRPPLYPRDGG
RSNSLPPEVFHSTAYQPPLRERFNSLDSPYCSTAEQRAPMHRDTYTRVPLGYEELYRHKQ
EQWVHHHGNMNRPSQSSPVFTVDVCPEVRPTDMVFLEHPEGVGGGRMTCKCHGGEESLAH
YSPWSCSTISPFESEPHHLSSHSCSKQPDGESGGKRWLHMFEPYRRLKDEDPIIPFGEGP
IISKWGAISRASRTGFHTTDPVQATASQGCAGTTSINFRDYSCHIGHSDHRWGPRGSDSS
SHSSFLESDQLAVSGLHVRHNSFSSGSKQGTDLLGKDGTESEPDRDIELELSALDMEDTE
TQDCNSEDSMETHSRSKNSHLSTVFGDPAASSQLENNLPDRMDAHLMKKMAFRKTLSPGD
LSMGKMLTRTCSPRSGDPPRPSPGPEMLLNGN
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgccggtacaggcagctcaatggactgagtttctatcctgccccatctgttacaatgag
tttgacgcctgcagccacaaacccatcagcctgggatgctcgcataccgtctgcaagacc
tgcctgcacaaactgcaccgcaaggcctgtccttttgaccagacggccattagcactgac
attgatgtgctgcctgtcaactgtgccctcctgcagctggtgggggcgccggttccggag
ggagagattgtgagtgtgggcagtgttgaagacacaagacattatgaagtgtgcaggatc
tgtgtggaggagctggcgctgtatctcaaaccaatcagtggaggaaaaggtgtagtgacc
ctcagtcagagcacgctcagtagacccatgcagaggaagctggtgacccttgtgaactgc
cagctggtcgaggaggagggccgtatgcgggcggtccgggcgtgcagatctctgggtgag
cgcaccgtcactgaactgattttgcagcaccagaacccacagcagctctccgccaaccta
tgggccgctgtgcgggcacgcggctgtcagtttctaggacctgccatgcaggaagacgct
ctgaagctggtgctgctggcgctggaggacggctcggctctctcccggaaggtcctggtg
ctgtttgtggtgcagaaactggaagcgcgcttccctcaggcatctaagaccagcatcggt
catgtagttcagctgctgtaccgcgcctcctgctttaaggtgaccaaacgtgatgaagac
tcctcactcatgcagctcaaagaggagtttcgcacttacgaagccctgcggcgcgaacac
gatgctcagatcgttcacatcgcaatggaagcgggactgcgcatctcaccggagcagtgg
tcgtctctgctgtacggggatctcatgcacaaatctcacatgcagtcaatcatagacaag
cttcaatccccagaatcctttgcaaagagcgtgcaggagctcaccataatcctgcagaga
acaggagacccagccaatctcaacagcctcagagctcctctcgagcgactggccggcatc
gaccacaaccctgatgcagccgctccgtcctggacagagctggagagtgtgttattggcc
gtgaaggttgttgtccacgggctggtggaattcatccaaaacttcagcaaaaagagcaat
gaaagtcctcaggctcagcccaacagcaagtacaagacgagtatgtgcagggacttacgg
cagcagggtggctgtccgagagggcccagctgcacctttgcccacacgcaggaggagctg
gagaagcacagaatgaggaataggaaagccagtggggcggcgaggcccttcccctcagtt
ccagtggttatgcccaaaaccggcaccaaaggagcagtccctgggtcagaggtgaagaac
cacgagaaagacgccccagaggacgcgtctcctactcagctcatccctagaggaggagac
caccaggaggacaaaacgctccccagtagtgcaaacggactgcctgctgccagcctcgaa
caaaatcacatgagtcagagccagtcgtctgcgatagcttcgggattgtgtacagaggac
gactgctgtctcctcaaacacgggcctgtcctcacgagagctcatcctaagatttactac
tctcaggaccagagaccatatgacctgtcatcctacaaccaacctgccattcctcctcac
aagtcatgcaatgctcgcttccatcgttccagcaacgtccctgagtccatgttacccccg
tcaatgggccctctgtacccagaccagcacccctctgttcctcctgcagacagattaggc
cccggtccgtacgggccaccctcgacctacacctctatgtcccacgcacacagcatgtat
accccggtctacgacagccggcgcgtgtggaggccgccgctgtatcccagggatggcggg
aggagtaactctctccctccagaggtttttcactccaccgcctaccagcctcccctccgg
gagcgcttcaactcgctggacagcccctactgcagcaccgcggagcagagagcaccaatg
cacagggatacgtacacccgtgttcctctcggctatgaggaactctatcgccacaaacag
gaacagtgggtacatcaccacggcaacatgaacaggccctcccaatcctcgccggtcttc
actgtggatgtgtgtccagaggtacggcccaccgatatggtgtttttagagcatcctgag
ggtgtaggtggtgggcgtatgacttgtaagtgtcatggtggagaagagagtcttgcccac
tactcgccctggtcgtgcagcaccatcagcccatttgagtcagagccccaccatttgtca
tcccactcctgttccaaacagccagatggggagagtggcggcaaacggtggctacacatg
tttgagccctacaggcggctgaaagatgaagatcccatcattccttttggagaggggccc
atcatatctaaatggggagccatctctcgggcatcccgcactggctttcacaccactgac
ccggtccaggccactgcatcacaggggtgcgccggcaccacatcaatcaacttcagagac
tatagctgtcatattggtcacagtgaccacagatggggcccacgcggatctgattcttct
agtcactccagctttctagaaagcgatcagctggccgtgtcagggctgcatgtaaggcac
aactccttcagcagcgggtcaaagcagggcacagatctgctgggcaaagatgggacggag
agtgagcctgacagagacatcgagctggagctgtccgctctggacatggaggacacagag
acacaggactgcaactctgaggactctatggaaacccatagccgctccaagaacagccac
ctctctacagtcttcggtgatccagcggcaagttctcagttggaaaacaacctgcctgac
agaatggacgcccaccttatgaagaagatggcattcagaaagaccctctctcctggagac
ctcagtatgggaaagatgttgacgaggacatgctcgcccaggtctggagaccctccgcga
cccagtccaggacctgagatgctgctaaacgggaactga
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