Onychostoma macrolepis: 131548195
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Entry
131548195 CDS
T09350
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131548195 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131548195 (taf5l)
03036 Chromosome and associated proteins [BR:
omc03036
]
131548195 (taf5l)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131548195 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
131548195 (taf5l)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131548195 (taf5l)
STAGA complex
131548195 (taf5l)
TFTC complex
131548195 (taf5l)
SAGA complex
131548195 (taf5l)
SLIK complex
131548195 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
PROPPIN
PEP5_VPS11_N
Ge1_WD40
Beta-prop_WDR75_2nd
WD40_like
TRIP13_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
131548195
NCBI-ProteinID:
XP_058645332
LinkDB
All DBs
Position
01:11687998..11696390
Genome browser
AA seq
602 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYESQFSRLRSFLQDAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAIVDLLRGAVTPQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWALSTHVQVEVTAACRTDYQLYGTGVGVGNTTSTSSSAAWAAVDGAEGAERVE
VTAGLPQSEAALEALQDCIKRVREGPPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAGF
DNSAVKLWSLRARKLKAGPHRTDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVYR
TAFLTDGSGLLSCSEDSTVRFWDLNSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRT
ARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTGH
RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHSDSITSLSFSQDSSLVAS
ASMDNSVRVWDIRSAHGSAPSDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEKQ
EQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtgcggacggagcagatccagtacgcggtgacccagtacctgaagaggaga
cagtacatagacacagatgggtctctgaagggggccaaactctcccagtccgctgaggaa
atggcagccagtctgacagttcagacggagtccagctgtgcgaatgtggtgtccgcagcc
ccgtgtcagtctgacccgcagcagtacgagtcccagttctccagactgcgctccttcctg
caggatgcagaagcaccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcgcggtgtggcctgaagggggcggtagactccttctacagt
cgcttccactcgttcttccagcaggaccctgagcagaaagcaatcgtagacctgctacga
ggagccgtcacacctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcacctgacggatcaagcatacagctacctgctgcgttacctgcagagt
gacgacaacagcgccatctgctgggcgctcagcacacatgtgcaggtggaggtgacagca
gcgtgccgaaccgactaccagctgtacggcacaggggtaggagtgggaaacactacctcc
acttcctcctccgctgcatgggctgcggtggatggggcggagggggcagagcgtgtggag
gtcacggccggcttacctcagagcgaggcggcgctggaggcgttgcaggactgcataaag
cgcgtgcgggaaggtccgccttcgctcaccaccgtctgcttctacgccttccagcacacg
gatcagctgctgaacacggccgaggtgtctgcggacagccgtctgctggcggccggcttc
gataactctgccgtcaagctgtggagtctgcgggccaggaagctgaaggcaggacctcac
aggacagacgtgtctaaaataagactggcctgtgacgtgctggaggaggaggcagatgac
gaggacgcctcgggcagtgagataaagaccctgcgtgctcacagcggccccgtgtaccgc
actgcgttcctgacggatggctccggcctgctgtcctgttcggaggactccaccgtgcgc
ttctgggatctgaacagcttcacgaacaccgtcctgtaccgcggccacgcctaccccgtc
tgggacgtggacgtcagtccctgcagcctctacttctccacggcgtcccacgaccgcacc
gcacgcctctggagcttcgcgcgcacctatccgctccgtctgtatgccggacacctctct
gacgtcgactgcgtcaaatttcaccccaactccaactacgtggcgaccggctccacggat
aaaacagtgcggctgtggagcacgcagcagggggcgtctgtgaggctgttcaccgggcac
cgcgggcccgtgctgtcgctcgccttctcgcccaacggcaagtacctggcctcggccgga
gaggaccagagactaaagctgtgggacctggcgtccggcagcctgttcaaagacctgcgg
ggtcacagcgacagcatcaccagcctctccttcagtcaggacagcagtctggtggcctcc
gcctccatggacaactcagtgcgggtgtgggacatacgcagcgcccacggcagcgccccc
agcgacggctccagcagcgagctgattggacagtacacgggcagcactagcaacatcctc
aatgtgcagttcatggcctgtaacctgctgctggtgactggcacggcgctggagaaacag
gagcagtga
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integrated database retrieval system
