Onychostoma macrolepis: 131548243
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Entry
131548243 CDS
T09350
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131548243 (vldlr)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
131548243 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
131548243
NCBI-ProteinID:
XP_058645376
LinkDB
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Position
10:4873574..4892951
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AA seq
862 aa
AA seq
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MVTSILGLLILPVCLQLCGFSRASQTECEQSQFLCRNGRCIPSVWQCDGDLDCSDGSDET
SCVRKTCAEVDYVCHSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QDCAPSSCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRNPTPPAKCSPSEMQ
CSSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCIHGSRQCNGFRDCAD
GTDEVNCKNLTQCNGPDQFKCRSGECIEMSKVCNKVRDCPDWSDEPIKECNMNECLLNNG
GCSHICRDLTIGYECDCTPGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVAVDADFVQQTIFW
ADLGQKAIFSTVLDKQEASHMKVIDNIQMPVGIAVDWIYKNIYWSDLGSRSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKFTGSDVTLLASNLNEPQDIIVYHELIQLSGTNWCNEKLENGGCSFMCLPAPQV
NKHSPKFTCVCPQGQTLASDGLRCRPEAPTAAPQDVGRVTLHPSHPKEGNISTSIHEVNS
SAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVYLKTTEEDLNIDISR
HSASVGHTYPAISMVNTEDDLS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattctggggctcctcattctgccagtatgtcttcagctgtgtggattt
tcgcgcgcttcccaaacagaatgtgagcagtctcagttcctgtgtcggaacggccggtgc
atcccgtctgtgtggcagtgtgacggtgacctggactgctcggacgggagcgacgagacg
tcctgcgtgaggaagacctgtgccgaggtggactatgtctgccacagtggccagtgcatt
cccaagagatggcagtgcgatggggaaccagactgtgaggatggctcagatgagagcatc
gaaatgtgccacacgaggacctgccgagtgaacgagttcagctgtggtgtcggctccacg
cagtgcattccggtcttctggaagtgtgacggtgagaaagactgcgacaacggagaggac
gagattaattgtggtaacattacatgcgctcctctggagttcacctgtgccagtggccgc
tgcgtttctcgtaatttcgtctgtaatggtgaggacgactgtggggatggcagcgacgaa
caagactgtgctccttcctcctgcggcccgagtgaagtcccttgtgggaataatacctgc
attcctaggagttggctgtgcgatgatgatgtggactgccaggaccaatcggacgagtcg
ccagagcgttgcggccgcaaccccacaccgccggctaagtgttcacccagcgagatgcag
tgcagctctggggaatgcattcacaggaagtggcgctgtgatggggatccagactgcaag
gacggcagcgacgagaaaaactgctctgcccgtacctgcagacccgaccagttcaagtgt
gatgacggcagctgtatccatggcagccgacagtgcaatggcttccgagattgtgcagat
ggcacagatgaagtcaactgcaaaaacttaactcagtgcaacggtcctgaccagttcaag
tgtcggagtggagagtgtattgagatgagtaaagtgtgtaataaggtccgtgactgtcct
gactggagtgatgaacccatcaaagagtgtaatatgaacgaatgcctgctcaataatgga
ggctgctcgcacatctgccgcgacctgacgattggctatgagtgtgactgcacgccagga
ctccagctcatcgatcgcaagacctgcggtgatgtcaatgagtgcctcaaccctggtata
tgcagtcaaatatgtataaatcttaaaggaggatacaaatgtgagtgtcacaatggctat
cagatggaccccacgactggagtgtgcaaggctgtaggtaaagagccctgtcttattttc
accaatcgaagagacatccgtaaactaggactggagcggcgtgaatatactcagattgtg
gagcagctgcggaacacagtagctgtagatgctgacttcgttcagcagacaatattctgg
gctgacctggggcagaaggcgatttttagcacagtattggataagcaggaggcaagtcat
atgaaagtgattgacaacattcagatgcctgttgggattgcagtggactggatttacaaa
aacatctactggtcagacctgggcagtaggagtatagcagtggccaacttcaatgggacc
aagaggaaggtactctttaacagcggcctgaaggaaccagcctctattgctgtagatcct
ctatcagggttcctgtattggtcagactggggcgagccagctaagattgagaagtctggt
atgaatgggattgacagacaggtcctagtagagacagacattcagtggcccaatggaatt
actcttgatctgattaagggccgactctactgggtggattcaaagctgcacatgctttgt
agtgtagacttgaatggagacaaccgccgtaaggtgctgcagtcaccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagtgttctggacagatggtgagaatgag
gccatctacggcgcaaacaagttcacaggatctgatgtaactctactggccagcaacctc
aacgaaccccaagacatcattgtgtaccatgagctaattcagctgtctgggaccaactgg
tgtaacgagaagttggagaatggaggctgttccttcatgtgcctgccagctccacaagtt
aacaaacattcccctaaattcacttgcgtgtgtcctcaaggtcaaacacttgcctcggat
ggcctgcgctgcagaccagaggcacctactgccgcccctcaagatgtagggagggtgacc
cttcaccccagtcaccctaaagaaggaaacataagcacctccatacatgaagtaaattca
tcagccaaaggatctgctgctgcctgggctattctacctgtgttgttattggccatggct
gctgctggtggttacttaatgtggcgcaactggcagatcaaaaataagaagagcatgaac
tttgataatccagtatatctgaagacgaccgaggaagacctcaatatcgatatcagcaga
cacagcgcttctgtaggccacacgtaccctgctatttcaatggtaaacacagaagacgac
ttgtcataa
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