Onychostoma macrolepis: 131548931
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Entry
131548931 CDS
T09350
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03030
DNA replication
omc03410
Base excision repair
omc03420
Nucleotide excision repair
omc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131548931 (rfc1)
03410 Base excision repair
131548931 (rfc1)
03420 Nucleotide excision repair
131548931 (rfc1)
03430 Mismatch repair
131548931 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omc03032
]
131548931 (rfc1)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131548931 (rfc1)
DNA replication proteins [BR:
omc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131548931 (rfc1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131548931 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_7
AAA_33
AAA_5
AAA_30
Rad17
RuvB_N
AAA_16
BRCT_2
AAA_14
AAA_17
nSTAND3
AAA_18
NTPase_1
RNA_helicase
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
131548931
NCBI-ProteinID:
XP_058646519
LinkDB
All DBs
Position
01:31325588..31340072
Genome browser
AA seq
1138 aa
AA seq
DB search
MDIRRFFASTKPAAPKPSNGSTSTDEEQKKKQKSKTKVTSPTSKEKPTGKRKKRVIIDSD
SEEEKKKKEKKTKKGTKETDAATVKKHPVTYVSDSDSDDTFMTLKKTKPKENGTAKGKKE
SGKAKEVKVSSSKSPNKSPNTISKGGVKSSQPTISPKIGPTPPKQMPTSVMAFFGSSSVQ
RSDKKMVASTSTKRKAPTQETEGSLSDEAIAKELQMDEDMELEKQIHDDEEFAKTLAMLD
EAPLPKKARVDSVSPSKSSSQAIASDTKPKKDPSPKKSPVKTSSKLAQMKRRQEEVEGQR
KKDRAEKQIKISPKKEPISPTSSERAATPKTGSASTGMIKSTPKSDSAPNKTSPTKPENT
SPEDLEKKRANSSAYRNFLNREGPRALGSKEIPQGAENCLEGCVFVLTGVLESMERDDAK
SLIERYGGKVTGNVSRKTTYLVLGRDSGASKTEKAESFGTKIINEDELFDLIRTKPGKKS
KYEIAAEAENKSSKTRTPNSRGKPTPPSKKATPQGPSPNKRSPLEGKSKPGSASKSGTLG
ASRSEVKKSLSFDQSKRASPVSHSIPESEGSSLLWVDKYRPRSLKNLIGQQGDQSCANKL
LRWLQNWHKHHSGNTKAPTAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGY
SYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYSGASQTVSSKHVLIMDEVDGMAGNEDR
GGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKE
GLKIPPPALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADAKNAKKDMKLGPFDV
CRKVFASGEETAHMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAGGGNMKNHLVLLSKT
ADSICDGDLVDKQIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGK
HSRSIQELASHMSLKTLSSKAAINLDYLPYLRSAVLEPLQSQGSEGASQSVKLMDDYDIV
KEDVDNMMEISMWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPYSLQVVKKSRKGAVDPE
LIGELESESQVQEEEEDDGVTADAMIKQKKTKPAKDVKQEKPGASGKGKGRGKGKATK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaggttttttgcatccactaaacctgcagcccccaaaccttccaatgga
agcaccagcactgatgaagagcagaagaagaaacagaaatcaaaaactaaggtcacaagt
cccacatctaaagagaaaccaactggaaaacgaaagaaaagagtcataattgattcagac
tctgaggaagagaagaagaagaaggagaagaagaccaagaagggcactaaagagactgat
gccgccacagtgaagaagcacccagtaacttacgtgtctgattctgattcggatgatacg
tttatgactctgaaaaagacgaaaccaaaagaaaacggaacagctaaaggcaagaaagaa
tcaggaaaagcaaaagaagtgaaagtctcatccagtaaatccccaaataaatccccaaac
accatctcaaagggaggggtgaagagctctcagcctaccatctccccaaagatcggacca
acgccaccaaaacaaatgcccacttcagtaatggccttctttggcagctcaagtgttcag
aggtcagacaagaaaatggtggccagtaccagcactaagaggaaggcacccacacaggaa
actgaggggtcgctcagtgacgaagccattgcaaaagagcttcagatggatgaagacatg
gagttggaaaagcagatccatgatgatgaggaatttgcaaaaacattagccatgctggat
gaagctcccttaccgaaaaaggctcgggtggactctgtctccccctccaagagcagctct
caggcaattgcctcagacaccaaacccaaaaaggacccgtcccctaaaaagagtcctgtg
aagaccagctccaaactggctcagatgaaaagacgacaggaagaagtggaagggcaaagg
aaaaaagacagggctgaaaagcagattaagatttctcctaagaaagagccaatctcacca
actagctcagagcgggcagctacgcccaaaacaggaagtgcttccacgggaatgataaaa
tcaacacctaaaagtgacagtgcacccaataaaacctcaccaacaaaaccagagaataca
agtcctgaggatctagagaaaaaacgggcaaattcatcagcctaccgtaactttttgaac
cgagaaggaccacgagcactggggtctaaagagataccacagggagcagagaactgcctg
gagggttgtgtgtttgtgttgaccggtgtgttagagtctatggagagggatgacgctaag
tcgctaatagagcgatatggcgggaaagtcacaggaaacgtcagtcgtaaaactacttac
cttgttctgggacgagacagtggagcctcaaagactgagaaggcggagagttttggcact
aagatcattaatgaagatgagttgtttgacctcataagaaccaaaccaggcaagaagtct
aaatatgagattgcagcagaggcagagaataaatcctctaaaacaaggactccaaactct
agaggcaaacccactcctccatccaagaaggccacaccacaagggcccagccccaacaag
agaagccctttagaggggaagtctaagcctggctctgcttctaaatctggaacacttggg
gcctctcgttcagaggtcaaaaagagtttgagctttgatcaatccaagagagcatcccct
gtatcccactctatccctgagagtgagggtagcagcctgttgtgggtggataagtaccgc
ccccgtagtctgaagaacctgattgggcagcagggggatcagagttgtgctaacaagctt
ctgcgttggttacagaactggcataaacatcacagcggcaatacaaaagcaccaactgcc
aaatttgggaagtttgggagtaaagatgacggttctggatttaaggctgcattgttatct
gggcctcctggtgttgggaagaccactactgctgctctcgtctgtgaggagttgggttac
agctacgtggagatgaatgcgagctgcacccgcagtaagaacagcttaaaggaagtgatc
gcagaatcgctcaacaacaccagcattaagaacttctatagcggtgcatctcagacagtg
agcagtaaacatgtcctcataatggacgaggtggacgggatggcaggaaatgaagacaga
ggaggaatacaggagatgattggtctgataaaacagtcaaagattcccattatctgcatg
tgtaatgaccgcaatcatcagaagatccgctcgctggctaactactgctacgacctgcgg
tttcagagaccccgtgttgagcagatcaagggggctgtgatgtctatagctttcaaagaa
ggtctgaagatcccacccccagcacttaatgaagtaattctggcgtccaatcaggatatt
cggcaggtactgcataatctgagcatgtggtctgctaaagacaaagtcatgacctatgac
caggccaaagctgatgctaaaaatgctaagaaggacatgaaactgggtccatttgatgtg
tgtcgaaaggtgtttgcttcaggagaggaaaccgcccacatgtctttgattgacaaatca
gaccttttcttccatgattactctttagcaccactatttgttcaagaaaactacctgcat
gtccgaccagctgctggagggggaaatatgaagaatcatttggtgttgttgagtaaaaca
gcagacagcatttgcgatggagatttagtggacaaacagatccgttccagacaggcatgg
tctctgcttcccacacaggcaatttatgcgagcgtgttgccgggagagctgatgcggggt
tatatgagtcagtttccgacctttcccagctggttgggcaaattctcatcagctggcaaa
cacagccgcagcatacaggagcttgcttcacacatgagcctaaaaacgttaagtagtaag
gcagccataaatctggattacctgccgtatttgcgctcagcagtattagagcctcttcag
tcgcaaggttcagagggagccagtcagagcgtgaagctcatggatgattatgacatcgtc
aaagaggatgttgataacatgatggagatcagcatgtggggcggacagccggatccttac
tctaaactagactccaaggtgaaagctgcatttacaagagcctacaataaggaatcccat
cttacgccgtactccttacaagtggtgaagaaaagccgtaaaggtgctgttgaccctgag
cttataggagagcttgagagtgaatctcaggtccaggaagaggaagaagacgatggggtt
acagcagatgcaatgatcaagcagaagaaaactaaaccagcgaaagacgtcaagcaagag
aaaccaggggcttctgggaaggggaaaggcaggggtaaaggaaaggccacaaagtga
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