KEGG   Onychostoma macrolepis: 131548992
Entry
131548992         CDS       T09350                                 
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
  KO
K14966  host cell factor 1
Organism
omc  Onychostoma macrolepis
Pathway
omc03083  Polycomb repressive complex
omc04980  Cobalamin transport and metabolism
omc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    131548992 (hcfc1a)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    131548992 (hcfc1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    131548992 (hcfc1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:omc01009]
    131548992 (hcfc1a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omc03036]
    131548992 (hcfc1a)
   03029 Mitochondrial biogenesis [BR:omc03029]
    131548992 (hcfc1a)
Protein phosphatases and associated proteins [BR:omc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     131548992 (hcfc1a)
Chromosome and associated proteins [BR:omc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     131548992 (hcfc1a)
   HMT complexes
    COMPASS/SET1 complex
     131548992 (hcfc1a)
    MLL-HCF complex
     131548992 (hcfc1a)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     131548992 (hcfc1a)
Mitochondrial biogenesis [BR:omc03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    131548992 (hcfc1a)
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 131548992
NCBI-ProteinID: XP_058646657
LinkDB
Position
11:17653811..17677413
AA seq 1847 aa
MTSPGSVVPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVMGWDIPVTYGVLPPPRESHTAVVYTEKTTKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPTISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTLAWETVLMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPALNAAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITLVPQAASPTVLPSTPASPVAASTARGPAILKVAA
PQSGTGTSIVTVRQATQAGKSPVTVTSLPAGVRMVVPTQTAQGTVRSEKPIGSSPQMSGM
AALAAAAAATQKIPPSPGATVLSVPAGATIVKTMAMTPGSTTHPTTVKVASPVMVSNPAT
RMLKTAAAQVATPTVSSPNTAARPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSP
LSMGGNLLSSLGKVMSVVQTKPVQTGAVTGQASSNPMTQIIQTKGPLPPGTILKLVTSAD
GKPTTIITTSQAGGTGNKPTILGISGMSPSNTTKPGTTTIFKTIPMSALQQGAAGVTSST
GVKSPITFVTTKVMTSGTGTPGKIITAMPKIGTAGGQQGLTQVVLKGAPGQPGTILRTVP
MGGVRLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLASANATLATPITT
LGSIATLSSQVINSTAVSAAQSNLATVTSTMQPTQVTLITTPSGVEAQPGQDLPVSILAS
PTSEQPTSTESGAGDASGSVTLVCSNPPCETHETGTTNTATTATANMGTVPAGTVQRVCS
NPPCETHETGTTNTATTASANMGTVQRVCSNPPCETHETGTTNTATTASSNMGTAPAGTV
QRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTASS
NMGGNQTGTVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETG
TTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQSGEA
SESTTSTESLPSTAAPQSRAITIVTQATPLPGPAVPSISSITESSSETGAEPVVMESSEA
ESLQAEGQAEAEAVAMQAEFQTGAGAEAMPSDFHAGAAALPSDFQGEAVAVAMQPESQAE
EGAVPMEHDASSMTEGETAQEQLPTAEMEGIEAASASQAEALALPPELMSDGQPTTLMVT
GLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDDQQTHTIPII
LTQQELAALVQQQQQLQAAQQQAAAQAALPTEGLAPADSLNDPSSESNGHNEMAAAVTST
VVGLLPSTSAETLAPSSTLAPAVVASPAKMQAAAALTEVANGIEAAKQNPPTVTIKPQVK
KENQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMKRVDLQPGTAYKFRVA
GINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYL
AIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNE
KGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq 5544 nt   +upstreamnt  +downstreamnt
atgacgtcccccggttccgttgttcctggaaccaccggagctccgctgcagccgcgatgg
aagcgggttctgggatggtccgggccagttccccgaccgagacacggacacagagccgta
gccatcaaggagctgatggtcgttttcggcggaggaaacgaagggatcgttgacgagttg
cacgtttataataccgcaacaaaccagtggttcataccagctgttcgtggagacattcct
ccaggctgtgcagcttatggttttgtatgtgatggcacacgtctattagtgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgccctcgcctgggc
cacagtttttcccttgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagatatttgaatgacctctataccctcgagctgcgt
ccgggatccagtgttatgggctgggatataccggtcacatatggagtgctgcctcctcca
agagagagccacactgctgtagtttatactgaaaaaactactaagaagtcacgtcttgtt
atatatggaggaatgagtggttgccgtttgggagatctttggacattggatattgataca
ctgacctggaacaagcctacaataagcggcacagctcccctcccccgtagccttcactca
gccaccactattacaaacaaaatgtatgtttttggtggctgggttcccttagtgatggat
gatgtgaaagtggccacacatgagaaggaatggaagtgtacaaacacactggcctgcctg
aacttggacaccttggcatgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgagcaggacattgcgctgtcgctattaacaacagactttatgtttggagtgga
cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacctgtggtacctt
gagacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacacaaattct
ttggaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccatcagccactgctgccacatcaccagccctcaacgcagctccctccctc
cctggaaactcgcctaagagtccagcgcctgcggcagctgctccgtctgctcagagtctg
ccgcaaagtggcatcactctcgtgccccaggctgcttctcccacagtcctgcccagcaca
cccgcaagtcccgtggctgcctcaacagcacgtggcccagctattctgaaagttgcagcc
cctcagtcaggcaccgggacgtcaattgtcactgtgcggcaggctacccaggccggaaag
tccccagtcactgtgacatcacttcctgcaggtgttcgcatggtagtgccaacacagacc
gctcaaggaacagtaagaagtgaaaaacccatcggcagcagccctcagatgagtggaatg
gcagctttggccgcagctgctgcagccacacagaaaatcccaccttcccctggagctact
gttctcagtgtgccggctggggccacaattgttaaaacgatggctatgacacctgggtcc
accactcaccccaccacagttaaagtggcatcacctgtcatggtaagcaaccctgccact
cgcatgctgaagactgcggctgcacaggtggccactccaacagtgtccagtcccaataca
gctgctcggcccatcatcactgtgcacaagtctggcacagttaccgtagcccagcaggct
caagttatgaccacggtggtgggcggagttaccaagaccatcactcttgtcaagagcccg
ctttccatgggaggaaacttgctctccagcttgggcaaggtgatgtcagtggtacagacc
aaaccagtgcagacaggtgctgtgacgggacaggcctcctccaacccaatgactcagatt
atacagacaaagggtcccctcccacccggcaccattctgaagctggtaacatctgcggat
ggaaaaccaaccaccataattaccaccagtcaagcaggtggcacaggaaacaagcccact
atcttgggcatcagtggcatgtccccctctaacaccaccaaaccgggcaccaccactatt
tttaaaacaatccccatgtctgctctacagcagggagctgcaggtgtgactagtagtaca
ggggtgaagagtcccatcacctttgtcaccacaaaggtgatgacatctggaacaggaacc
cctggcaaaatcattacagcaatgcctaagattggtacagcaggtggccagcaaggccta
acacaggttgttctaaagggagctcctggtcagcctggaaccatccttcgcactgtgccg
atgggaggagtgcgtctcgtgtctccagtatctggggtcaagccaactgtgacgacacta
gttgtgaagggaacaactggtgtaacaactcttggcacagtcacaggaacagtttcttcc
agtttagctggaggaagcttagccagtgccaatgccaccttggcaactcccatcaccact
ctgggttcgattgccaccctctccagccaggtcattaattctaccgctgtgtcagctgct
cagagcaacctggccactgtcacctccaccatgcagcccacccaggtgactctcataaca
acacccagtggtgtggaggctcagcctggtcaagatctgcctgtttccattctggcctct
cccacctctgagcagcccacctctactgagtctggtgcaggcgacgcttctggcagtgtt
actttagtgtgctccaacccaccctgtgagacgcatgagacgggcaccaccaacacggcc
accacagcgacggcaaatatgggcactgtaccagctggcacagtacagagagtgtgttcc
aacccaccctgcgaaacgcatgaaacgggtacaacaaacactgccaccacagcatctgcc
aacatgggcactgtacagagggtctgctccaacccaccatgtgagacccatgaaacgggt
accaccaatacagctaccacagcatcttcaaatatgggcacagctcctgctggcactgtc
cagagggtctgctccaacccaccctgtgagacccacgagacaggcaccaccaacacagca
accacagcgtcatctaacatgggcggaaatcaaacggggacggtgcagagggtctgctca
aacccaccttgtgaaactcacgagacgggcaccaccaacacagcaaccacagcgtcatct
aacatgggcggaaatcaaacaggcactgtccagagggtctgctccaacccaccctgtgag
acccacgagacgggcaccaccaacacagcaaccacagcgtcatctaacatgggcggaaat
caaacaggcactgtccagagggtctgctccaacccaccctgtgagacccacgagacgggc
accaccaacacagcaaccacagcgtcatctaacatgggtggaaatcaaacgggaacggtg
cagagggtctgctcaaacccaccttgtgaaactcacgagacgggcacgacaaacacagca
accactgcaacctgcagtatggagacggatgagggaacagcccaacagagtggtgaggca
tcggaatctaccaccagtacggaaagccttccatccactgcagcaccccagagcagagcc
attactatagtcacacaggccacacctctaccaggacccgctgttccatccatctcttca
atcactgagtcatcctcagagaccggagctgagccggttgttatggagagctcagaggca
gagtctttgcaggcagaaggccaggctgaagcggaggcagtcgccatgcaggcagagttc
cagacaggggcgggggcagaagcaatgccgagtgacttccatgcgggggcagccgccttg
ccgagtgacttccagggagaagccgtagcggtagccatgcagccagagagccaagcggag
gaaggggcagtgcccatggaacatgacgcttctagcatgacagagggagaaaccgctcag
gagcagctaccgacagctgagatggagggtatagaggcagcatcagcatcacaggccgag
gcgctggccttgccaccagagctgatgtcggacgggcaacccacaacgctgatggtgacg
ggtctgaccccagaggagctggccgtcacggcagccgcagaggcagcagcccaggctgca
gcgacagaagaggcccaagccctcgccattcaggctgtactacaagcagcacagcaggct
gttatgagctcaggtgatgctggaggagacgaccagcagacccacaccatacccatcatt
ctgacccagcaagaactagcggctttggttcagcagcaacagcagctccaggcagcccag
cagcaagctgctgcccaggccgcactgcccactgagggcttggctccagctgacagctta
aatgacccctcatcagaaagcaatggacacaacgagatggccgccgctgtcacaagtaca
gtagttggactgctgcctagcacctcagcagagactttggctccatccagcacattagcc
cccgcagtagttgccagtccagctaagatgcaggcagctgctgctctgactgaagtggcc
aatggtattgaggctgcgaaacaaaaccctcccactgttaccatcaaacctcaagtgaag
aaagaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggttgtaacacat
ttctacatgcctgcagatgacgccgcttatgttgaggatgattctggcacaatccctgac
tacagccagatgaagagggtggaccttcaacccgggacggcctacaagttccgtgtggcg
ggtataaacacatgtggccgtggagccttttctgaaatatctgctttcaagacctgttta
ccgggcttcccaggggcaccatgtgctataaagatcagcaagagtccagacggtgcccat
cttacatgggagcccccatccgtgacatcaggaaagatcacggagtattctgtgtatctg
gctatccagagcagccagaccaccgaggcgaaaccctcggccccggcccagcttgccttc
atgcgtgtttactgtgggccgaatccttcctgcctggtccagtcctccagcctgtccaac
gcccacatagactacaccaccaaacccgccatcatcttccgcatcgctgcacgcaacgag
aaaggttatggcccggctacacaagtgcgatggctgcaagagtctaacaaagatggcctt
tctgcaaagcctgccccaaaaagagcagtttcttcaccagatacgaaagggattggtcag
aagaaagcaagaatggaccagtaa

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