Onychostoma macrolepis: 131548992
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Entry
131548992 CDS
T09350
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03083
Polycomb repressive complex
omc04980
Cobalamin transport and metabolism
omc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131548992 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
131548992 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131548992 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omc01009
]
131548992 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131548992 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
omc03029
]
131548992 (hcfc1a)
Protein phosphatases and associated proteins [BR:
omc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131548992 (hcfc1a)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
131548992 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
131548992 (hcfc1a)
MLL-HCF complex
131548992 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
131548992 (hcfc1a)
Mitochondrial biogenesis [BR:
omc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
131548992 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
131548992
NCBI-ProteinID:
XP_058646657
LinkDB
All DBs
Position
11:17653811..17677413
Genome browser
AA seq
1847 aa
AA seq
DB search
MTSPGSVVPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVMGWDIPVTYGVLPPPRESHTAVVYTEKTTKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPTISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTLAWETVLMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPALNAAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITLVPQAASPTVLPSTPASPVAASTARGPAILKVAA
PQSGTGTSIVTVRQATQAGKSPVTVTSLPAGVRMVVPTQTAQGTVRSEKPIGSSPQMSGM
AALAAAAAATQKIPPSPGATVLSVPAGATIVKTMAMTPGSTTHPTTVKVASPVMVSNPAT
RMLKTAAAQVATPTVSSPNTAARPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSP
LSMGGNLLSSLGKVMSVVQTKPVQTGAVTGQASSNPMTQIIQTKGPLPPGTILKLVTSAD
GKPTTIITTSQAGGTGNKPTILGISGMSPSNTTKPGTTTIFKTIPMSALQQGAAGVTSST
GVKSPITFVTTKVMTSGTGTPGKIITAMPKIGTAGGQQGLTQVVLKGAPGQPGTILRTVP
MGGVRLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLASANATLATPITT
LGSIATLSSQVINSTAVSAAQSNLATVTSTMQPTQVTLITTPSGVEAQPGQDLPVSILAS
PTSEQPTSTESGAGDASGSVTLVCSNPPCETHETGTTNTATTATANMGTVPAGTVQRVCS
NPPCETHETGTTNTATTASANMGTVQRVCSNPPCETHETGTTNTATTASSNMGTAPAGTV
QRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTASS
NMGGNQTGTVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETG
TTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQSGEA
SESTTSTESLPSTAAPQSRAITIVTQATPLPGPAVPSISSITESSSETGAEPVVMESSEA
ESLQAEGQAEAEAVAMQAEFQTGAGAEAMPSDFHAGAAALPSDFQGEAVAVAMQPESQAE
EGAVPMEHDASSMTEGETAQEQLPTAEMEGIEAASASQAEALALPPELMSDGQPTTLMVT
GLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDDQQTHTIPII
LTQQELAALVQQQQQLQAAQQQAAAQAALPTEGLAPADSLNDPSSESNGHNEMAAAVTST
VVGLLPSTSAETLAPSSTLAPAVVASPAKMQAAAALTEVANGIEAAKQNPPTVTIKPQVK
KENQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMKRVDLQPGTAYKFRVA
GINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYL
AIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNE
KGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggttccgttgttcctggaaccaccggagctccgctgcagccgcgatgg
aagcgggttctgggatggtccgggccagttccccgaccgagacacggacacagagccgta
gccatcaaggagctgatggtcgttttcggcggaggaaacgaagggatcgttgacgagttg
cacgtttataataccgcaacaaaccagtggttcataccagctgttcgtggagacattcct
ccaggctgtgcagcttatggttttgtatgtgatggcacacgtctattagtgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgccctcgcctgggc
cacagtttttcccttgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagatatttgaatgacctctataccctcgagctgcgt
ccgggatccagtgttatgggctgggatataccggtcacatatggagtgctgcctcctcca
agagagagccacactgctgtagtttatactgaaaaaactactaagaagtcacgtcttgtt
atatatggaggaatgagtggttgccgtttgggagatctttggacattggatattgataca
ctgacctggaacaagcctacaataagcggcacagctcccctcccccgtagccttcactca
gccaccactattacaaacaaaatgtatgtttttggtggctgggttcccttagtgatggat
gatgtgaaagtggccacacatgagaaggaatggaagtgtacaaacacactggcctgcctg
aacttggacaccttggcatgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgagcaggacattgcgctgtcgctattaacaacagactttatgtttggagtgga
cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacctgtggtacctt
gagacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacacaaattct
ttggaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccatcagccactgctgccacatcaccagccctcaacgcagctccctccctc
cctggaaactcgcctaagagtccagcgcctgcggcagctgctccgtctgctcagagtctg
ccgcaaagtggcatcactctcgtgccccaggctgcttctcccacagtcctgcccagcaca
cccgcaagtcccgtggctgcctcaacagcacgtggcccagctattctgaaagttgcagcc
cctcagtcaggcaccgggacgtcaattgtcactgtgcggcaggctacccaggccggaaag
tccccagtcactgtgacatcacttcctgcaggtgttcgcatggtagtgccaacacagacc
gctcaaggaacagtaagaagtgaaaaacccatcggcagcagccctcagatgagtggaatg
gcagctttggccgcagctgctgcagccacacagaaaatcccaccttcccctggagctact
gttctcagtgtgccggctggggccacaattgttaaaacgatggctatgacacctgggtcc
accactcaccccaccacagttaaagtggcatcacctgtcatggtaagcaaccctgccact
cgcatgctgaagactgcggctgcacaggtggccactccaacagtgtccagtcccaataca
gctgctcggcccatcatcactgtgcacaagtctggcacagttaccgtagcccagcaggct
caagttatgaccacggtggtgggcggagttaccaagaccatcactcttgtcaagagcccg
ctttccatgggaggaaacttgctctccagcttgggcaaggtgatgtcagtggtacagacc
aaaccagtgcagacaggtgctgtgacgggacaggcctcctccaacccaatgactcagatt
atacagacaaagggtcccctcccacccggcaccattctgaagctggtaacatctgcggat
ggaaaaccaaccaccataattaccaccagtcaagcaggtggcacaggaaacaagcccact
atcttgggcatcagtggcatgtccccctctaacaccaccaaaccgggcaccaccactatt
tttaaaacaatccccatgtctgctctacagcagggagctgcaggtgtgactagtagtaca
ggggtgaagagtcccatcacctttgtcaccacaaaggtgatgacatctggaacaggaacc
cctggcaaaatcattacagcaatgcctaagattggtacagcaggtggccagcaaggccta
acacaggttgttctaaagggagctcctggtcagcctggaaccatccttcgcactgtgccg
atgggaggagtgcgtctcgtgtctccagtatctggggtcaagccaactgtgacgacacta
gttgtgaagggaacaactggtgtaacaactcttggcacagtcacaggaacagtttcttcc
agtttagctggaggaagcttagccagtgccaatgccaccttggcaactcccatcaccact
ctgggttcgattgccaccctctccagccaggtcattaattctaccgctgtgtcagctgct
cagagcaacctggccactgtcacctccaccatgcagcccacccaggtgactctcataaca
acacccagtggtgtggaggctcagcctggtcaagatctgcctgtttccattctggcctct
cccacctctgagcagcccacctctactgagtctggtgcaggcgacgcttctggcagtgtt
actttagtgtgctccaacccaccctgtgagacgcatgagacgggcaccaccaacacggcc
accacagcgacggcaaatatgggcactgtaccagctggcacagtacagagagtgtgttcc
aacccaccctgcgaaacgcatgaaacgggtacaacaaacactgccaccacagcatctgcc
aacatgggcactgtacagagggtctgctccaacccaccatgtgagacccatgaaacgggt
accaccaatacagctaccacagcatcttcaaatatgggcacagctcctgctggcactgtc
cagagggtctgctccaacccaccctgtgagacccacgagacaggcaccaccaacacagca
accacagcgtcatctaacatgggcggaaatcaaacggggacggtgcagagggtctgctca
aacccaccttgtgaaactcacgagacgggcaccaccaacacagcaaccacagcgtcatct
aacatgggcggaaatcaaacaggcactgtccagagggtctgctccaacccaccctgtgag
acccacgagacgggcaccaccaacacagcaaccacagcgtcatctaacatgggcggaaat
caaacaggcactgtccagagggtctgctccaacccaccctgtgagacccacgagacgggc
accaccaacacagcaaccacagcgtcatctaacatgggtggaaatcaaacgggaacggtg
cagagggtctgctcaaacccaccttgtgaaactcacgagacgggcacgacaaacacagca
accactgcaacctgcagtatggagacggatgagggaacagcccaacagagtggtgaggca
tcggaatctaccaccagtacggaaagccttccatccactgcagcaccccagagcagagcc
attactatagtcacacaggccacacctctaccaggacccgctgttccatccatctcttca
atcactgagtcatcctcagagaccggagctgagccggttgttatggagagctcagaggca
gagtctttgcaggcagaaggccaggctgaagcggaggcagtcgccatgcaggcagagttc
cagacaggggcgggggcagaagcaatgccgagtgacttccatgcgggggcagccgccttg
ccgagtgacttccagggagaagccgtagcggtagccatgcagccagagagccaagcggag
gaaggggcagtgcccatggaacatgacgcttctagcatgacagagggagaaaccgctcag
gagcagctaccgacagctgagatggagggtatagaggcagcatcagcatcacaggccgag
gcgctggccttgccaccagagctgatgtcggacgggcaacccacaacgctgatggtgacg
ggtctgaccccagaggagctggccgtcacggcagccgcagaggcagcagcccaggctgca
gcgacagaagaggcccaagccctcgccattcaggctgtactacaagcagcacagcaggct
gttatgagctcaggtgatgctggaggagacgaccagcagacccacaccatacccatcatt
ctgacccagcaagaactagcggctttggttcagcagcaacagcagctccaggcagcccag
cagcaagctgctgcccaggccgcactgcccactgagggcttggctccagctgacagctta
aatgacccctcatcagaaagcaatggacacaacgagatggccgccgctgtcacaagtaca
gtagttggactgctgcctagcacctcagcagagactttggctccatccagcacattagcc
cccgcagtagttgccagtccagctaagatgcaggcagctgctgctctgactgaagtggcc
aatggtattgaggctgcgaaacaaaaccctcccactgttaccatcaaacctcaagtgaag
aaagaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggttgtaacacat
ttctacatgcctgcagatgacgccgcttatgttgaggatgattctggcacaatccctgac
tacagccagatgaagagggtggaccttcaacccgggacggcctacaagttccgtgtggcg
ggtataaacacatgtggccgtggagccttttctgaaatatctgctttcaagacctgttta
ccgggcttcccaggggcaccatgtgctataaagatcagcaagagtccagacggtgcccat
cttacatgggagcccccatccgtgacatcaggaaagatcacggagtattctgtgtatctg
gctatccagagcagccagaccaccgaggcgaaaccctcggccccggcccagcttgccttc
atgcgtgtttactgtgggccgaatccttcctgcctggtccagtcctccagcctgtccaac
gcccacatagactacaccaccaaacccgccatcatcttccgcatcgctgcacgcaacgag
aaaggttatggcccggctacacaagtgcgatggctgcaagagtctaacaaagatggcctt
tctgcaaagcctgccccaaaaagagcagtttcttcaccagatacgaaagggattggtcag
aagaaagcaagaatggaccagtaa
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integrated database retrieval system