Onychostoma macrolepis: 131549107
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Entry
131549107 CDS
T09350
Symbol
chd5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131549107 (chd5)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131549107 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
AAA_22
HMG_box
Motif
Other DBs
NCBI-GeneID:
131549107
NCBI-ProteinID:
XP_058646922
LinkDB
All DBs
Position
11:15166123..15210735
Genome browser
AA seq
2041 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDVPDEDEEGERRRSVPLSHLERFFSEDDSVKQHKKKKPSKI
MEGKEPKVKKKKKKEGIPSGLDDMSDREDHGHRSGSESSTYSSLKKKKKKPKEKKERKTK
QRKKDDDEDDDEDDDGNLKEPKSSSQLMQEWGLEDVLYAFSEDDYKTITNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPPICIRS
IQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQGGKRKKGSSSEE
DFLDDFSDFDDISIHSASVRSDTSAAPKKKSARRGRKKRKSFSLNSMVNVGEDGDGYETD
HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEE
EEDEVAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMV
RNVCIVSPLKGKVQKILHWAWSDPPLPPEVPLGRDGEKVDGLAKIPLKGRPERQLFVKWA
GLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYA
AMEERFYRYGIKPEWMIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEADDFNIPDYDS
FKQAYWDHRDQMLGESHHPLLFRKGKRLKEEVKRREPPPDTPVVDPTIKFEQQPWYIDDT
GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSA
PLSTIINWEREFEMWAPDFYVVTYTGDKDSRAVIRENEFTFEDSTVKSGRKVFRMKKDAQ
IKFHVLLTSYELITIDQAVLGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTG
TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLXRLKADV
FKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHP
YLFPVAAVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLL
EDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVI
IYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPG
LGSKTGSMSKQELDDILKFGTEELFKDDVEAARTMGELKWFKIXTLCGFQXFMSXISSAG
DNKEGEEGSVIHYDDNAISKLLDRSQDATEDTEIQNMNEYLSSFKVAQYVVREEDGEEEV
QREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDD
LSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVSGNIEVLGFNA
RQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETF
ADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKFSTPDLIPVGLELKKLTESVSSD
PNTPVPASPVPTQPSTPVPSEKTESVSGSQEDKEITEPESTKSLDPEQPVMPEPSTAPEK
TNEGEEPKSGSPDAKGMEESENNDTPLVHSEPSSNQAQPPNKPSEQSANQTPLDCGKGKE
TSPERGENKPSPAKIDDKEQKPVSTAIPDDFKTEDPPESHLNGEKDTRDDVDESHRDDKN
SIKTRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQ
DIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQD
PSHPAMALNTRFSEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR
LPSMLSRVPPVSARLQMSERGILSRLTSRGNEPPPQQPFPQGSFSCSQMYNSGFAGGFRG
PGGTAMVNYSQMPLGPYVSVSSNGPPAPASLLEKKSSDALRDVATPDLKSGKPSDVICIE
D
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctaagcaatgaagatgaggggcaagacgatatggattttgaggacgac
gtgccagatgaggatgaggaaggtgaacgtcggaggagtgttcccctgtcacacttagag
aggttcttctctgaggatgattcggttaaacaacataagaagaagaaacccagcaagata
atggagggaaaggagcccaaagttaagaaaaagaagaagaaggaggggattccaagtggg
ctagatgatatgtcagacagagaggatcatggtcacaggtcaggaagtgagagcagcacc
tacagctccctgaagaagaaaaagaaaaagcccaaagagaagaaggagaggaaaacaaaa
cagagaaagaaagatgatgatgaggacgacgatgaggacgatgatggaaacttaaaggag
ccaaagtcatccagtcagctgatgcaagagtggggtcttgaagatgtgctgtatgccttc
tcagaggacgactataaaaccatcaccaactacaaagccttcagccagtttcttaggccc
ctcattgccaagaagaaccccaagatccccatgtcaaaaatgatgacggtgcttggagca
aagtggagagagttcagtgcgaacaaccctttcaaaggcacctctgcaactgctgtagcg
gctgccgtagctgctgctgtggaaactgtcaatgtggctccgcccatctgtattagaagt
atccaacagatctcaccatctggcccaatcaaaaaagccaaaaccaaagagggaaagggg
cctggtgctaaaaaaaaaagtaagccagtgaaagaaacaaaaaagaaagggaaaccgaag
aagtccaaatcaaaagcaggccagggtggaaaaaggaaaaaaggctcttcgagcgaggag
gatttcttggatgacttttcagactttgatgacatcagcattcacagtgcctctgtacgc
tcagacacttcagcggcacccaaaaagaagtcagcccgccgaggacgaaaaaaaagaaaa
agtttctctttaaactccatggttaatgtaggagaggatggagacggctacgagacagac
catcaagattactgtgaggtttgtcagcagggaggagagatcattctatgtgacacctgt
cccagagcatatcacctggtgtgtctggatccagaactggagaaagcccctgaaggcaaa
tggagctgcccccactgcgaaaaagaaggcattcagtgggaggccaaagacgacgaggag
gaggaagacgaggttgctggtgaggaggaagatgaccacatggagttctgcagagtgtgt
aaggatggaggagagctgctgtgctgtgatacctgcccttcctcctaccacatccactgt
ctcaacccaccacttcctgaaattcccaatggagaatggctgtgtccacgatgcatggtg
agaaacgtctgcatagtgtccccactaaaagggaaggtccagaagattctgcactgggcg
tggagcgatcctcctctaccacctgaggttcctcttgggcgagatggagagaaggtagac
ggtttggccaaaataccgctgaagggtcgtccagagaggcagctgtttgtgaaatgggct
gggctgtcctactggcactgctcctgggtcagcgaactacagttggagctatatcacaca
gtaatgtaccgtaactaccaacggaagaacgacatggacgaaccaccaccatacgactat
ggctctggggaggaggaacttaacagcgagaagaggaggagcaaagaccctcagtatgca
gccatggaggaacgattctaccgttacggcatcaagccggagtggatgatcattcaccgg
atcctcaaccacagttttgataaggatggagatgtacactacctgattaagtggagagat
ttgccgtatgatcagtgcacctgggaggctgatgactttaacatcccagattatgacagc
tttaaacaagcctactgggaccacagggatcagatgctcggtgaaagccatcaccccctg
ctgttcagaaagggaaagagactcaaagaggaagtaaagaggagagaacctccaccagat
actccagttgtggatcctaccatcaagtttgaacagcagccgtggtacattgatgacaca
gggggaactttgcacccataccaactggaaggcctgaactggttgcgattctcttgggcc
caaggaaccgacacaatcttggctgatgaaatggggcttggcaagactgtgcagacaata
gtgttcctgtactcactctacaaagagggtcactccaaagggccgtttctggtcagtgcg
ccactctccaccatcatcaactgggagagagagtttgagatgtgggctccggatttctac
gttgtgacttacacaggggacaaagacagcagggctgtcatacgtgagaatgaatttacc
ttcgaggacagcaccgtcaaatcaggtcgcaaggttttccgcatgaagaaggacgcacag
ataaagtttcatgtcctgctgacgtcatatgaactgatcaccattgatcaggcagtactt
ggctccattacctgggcctgtttggttgtggatgaagcccaccgactgaaaaataaccag
tcaaagtttttcagaattctgaatggctacaaaatctactataagctgctcctgactgga
acccctttgcagaacaatctggaagagctttttcacctgctcaactttctcaccccagag
cgcttcaataacctggagggctttctggaggagtttgcggacatctcgaaagaggaccag
attaagaaactacacgacctgctggggccacacatgctcnagagactgaaggcagatgtg
tttaaaaacatgccggcaaaaactgagcttatagtgcgagtagagctcagcccaatgcag
aagaaatactacaagttcattttaacacgtaactttgaggcattgaattccaagggagga
gggaaccaggtgtctcttcttaacatcatgatggacttgaagaaatgctgcaaccatccc
tacctgtttccagtggctgcagtggaagctccggtcttgcccaatggttcttatgatggc
aacctcctggtgaaatcctcaggaaaactcaccctgcttcagaagatgctcaaaaaactg
aaagatgaagggcacagggttctcatcttctctcagatgacaaagatgctagatctgcta
gaggacttcctggagtttgaggggtataaatacgagcgtattgatgggggcatcacaggg
gggctgcgtcaggaggccatcgatcgctttaacgcacccggggctcagcagttctgtttt
ctgctgtctacacgtgctggaggtttgggtatcaatctggcaaccgcagacacagtgatc
atatatgactctgactggaacccacacaatgatattcaggcatttagcagggcacatcgt
atcgggcaaaataaaaaggtgatgatctatcgctttgtaactcgggcatccgtagaggag
cgtattacccaagtagccaagcgaaagatgatgctaacccatctggtggtgcgtcccggc
ttgggctctaagacgggctccatgtccaaacaggaactagacgacatcctcaagtttggc
actgaggagctttttaaagatgatgtggaagccgccagaacgatgggtgagctgaagtgg
tttaagatannaacactttgtggattccagtagttcatgtcctaaatctcttcagcagga
gataataaagaaggagaggagggcagtgtgattcactacgatgataacgccatttccaaa
ctgctggaccgtagccaggatgccaccgaggacacagagatccagaacatgaacgagtac
ctgagctcattcaaggtggctcagtatgttgtgagagaggaggatggagaggaggaggtc
cagagggagattattaagcaggaagagaatgttgatccagactactgggagaagctcttg
aggcaccattatgagcagcagcaggaggatttggcccggaacctgggcaaagggaaacgc
atccgcaaacaggtcaactataatgacgcctctcaggaggaccaagagtggcaggatgat
ctttcagataatcaatctgagtactccgtcgggtccgaggatgaagatgaagattttgag
gaacgtcctgaaggaggacgcagacaatctcgcagacagctgaagagcgatcgggacaaa
ccattgccaccgttgctggctagagttagtggaaacatagaggttttgggatttaacgcc
cggcagcggaaagccttcctgaatgcgattatgcgctggggtatgcccccacaagatgcc
ttcaactctcactggctggtccgtgacctgagaggaaaaagtgagaaggagttcagggct
tatgtatctctgttcatgaggcacctgtgtgagccaggggcagatggagcagagacattt
gcagatggagtcccgagggaaggcctatcccgccaacatgttctcacccggatcggtgtc
atgtctctcgtccgcaagaaggttcaggagtttgagcatgtgaatgggaagtttagtaca
ccagatttgattcctgtgggattggagctgaaaaaacttactgaaagtgtctcatcggac
cccaatacacctgttcctgcaagtccggttccaactcaacccagcacacctgttccttca
gaaaagacagagtcagtgtccggttctcaagaagacaaggagattacagaaccagagagt
accaaatcgctggaccctgagcagccagtaatgccagaaccctccactgcaccagagaaa
accaatgagggagaagaaccaaaaagcggaagtccagatgcaaaaggaatggaagagagc
gagaataatgacacccctcttgtccattcagagccatcatccaatcaagcacagccaccc
aataaacctagtgagcagtcagccaatcagacacctttagactgtggtaaagggaaagaa
acttctccggagagaggggaaaataaacccagcccagcaaaaatagatgataaggagcaa
aaaccagtttctacagccattcctgatgatttcaaaactgaagacccccctgagagccat
ctgaatggagagaaagacacgagggatgacgtggatgagagccacagagatgacaagaac
agcatcaagactcgtttcatgtttaacatcgcagatggaggattcacagaattacacacg
ctgtggcagaatgaggaacgcgcagctgtgtcatctggcaaaatgtacgacatctggcac
cgtcgccatgactactggctgctagctggcatcgtaacacatggctatgcccgctggcag
gacattcagaacgacccacggtacgccatcctcaatgagcctttcaagactgaaatgcac
aaagggaactacttagaaatgaagaataaatttcttgccagacgttttaagctcctggaa
caggctttggtaattgaggaacagcttcggcgcgcagcatacctgaatatgactcaggat
cccagtcaccccgccatggccctcaacacacgtttctcagaggtggagtgcttggctgag
tcccatcaacacctctccaaagagtcactggctggtaacaagcccgccaatgctgtgctg
cacaaagtgttgaatcagctggaggagctgttaagcgatatgaaggctgatgtgacgcgg
ttgccctccatgctttcgcgggtcccacccgtgtccgcccggctccagatgtcagagcga
ggcatcctcagcagactcaccagccggggcaacgagccgccacctcagcagcctttccct
cagggctctttcagctgttctcagatgtataatagcggtttcgccggagggttccgtgga
cctggaggcactgcgatggtgaactacagtcagatgcccctggggccgtacgtcagcgtg
tcctcaaacggtcctccagccccagccagcctcctggagaagaagtccagtgatgctctg
cgagatgtggccacccctgatttaaaatcaggcaaacctagcgatgttatatgcattgag
gactag
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