Onychostoma macrolepis: 131549188
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Entry
131549188 CDS
T09350
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
omc
Onychostoma macrolepis
Pathway
omc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131549188 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131549188 (nfasca)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
L1 family
131549188 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
Ig_4
Ig_6
Izumo-Ig
Ig_DSCAM-DSCAML_C
V-set_CD47
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
131549188
NCBI-ProteinID:
XP_058647098
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All DBs
Position
11:complement(18562512..18653797)
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AA seq
1381 aa
AA seq
DB search
MWTQERWAALAVLSIILLLSKVVAPIEVPLDPKIQQELKQPPTIVKQSLKDYIVDPRDNI
IIECEAKGTPVPTFLWRRNGKFFNVGKDPRVTMRSRSGTLEIRSSGKPEDYEGEYQCFAS
NDFGTAISNKILLRVSKSPLWPKEVLEPVVVREGESLVLPCNPPPGLPPPETFWMDSSIM
PIIQDKRVSMGLNGDLFFSNVLAKDANTDYSCNARFEFTHTIQQKNPYTLKVLTKEPYND
TFINSTDLYGARNVPETQPTFLSPKGLSSSKIVLRGEQLLLECIAAGVPSPNINWNKKGA
ELPSKKVKIENFGKTLRLLNVSEEDSGDYVCMASNKMGSIRHSVEVQVKAAPYWLDKPTN
LVLAPDENGRLVCRARGNPKPTVQWLVNGEPIESSLPNPNRQVLGDTILFHSVQIGSSAV
YQCNASNEHGYLLANAFVNILDMAPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPLLRWF
KNGLGSGLDGGHYKLYYNGTLEIKQARPEDQGTYTCVASNILGKMENQVRLEVKEPTRIV
RAPEHVTQAKGTTVRFDCRVKHDPSLPVTVTWLKDDKPLSFTWIGRFRKDDEILTISNVN
PEDAGTYTCTAKTEIDEHSASARLTVIENGLSSASNRSASAGRPDPPQDLELSDPSARSV
RLTWVPGNENNSPVTQFLVQFEEDRWEPGKWQNLSIFDGNLNSVNLQLSPFVNYQFRVIA
INAVGQSQPSLPSARYQTSGASPDVVPSGLEGWGSKKNNMEITWQALKNTERNGPNLRYM
VSWRRKDTEEEWNNITTTRTKHIIHNTDTYVPYEIKIQAINDFGHSPESNIVIGYSGEDK
PSAAPTELRVSKINSTKVNVHWVPVDPSTVNGEFKEYKLYYWREASLIKGLKVNKTKLHK
GFFTTAEQPSGILTELFPYSKYKMYMVVANREYEGPQSNPVEFYTKEGEPGAPKYFRIQR
HTDVVHLKWDKPLEPNGVLIGYTLQYHTVNGTQAGERKAQSFPPNVTEYIMNLPNRFTRF
KFYLAARTQVGAGEVYAVESPHFANEGTPDTDSTVVAVNFTDALMFETPPPPPPLSTDPV
PTILTPEPATPAPTTAAPPKPTTTTTTTSTTTTTTTTTTTTTTTTTTTASTTVLPVRPMS
PKTVDWKMLAPNVKIWNLTVDANNDYANVSWKHNFSVDSSEFVLEFTLDSNASMKSIQVN
HQPPIKLAGLVAGAKYRLRVYSHEHNSISSDYVTFETGRAYKEQEDIATQGWFIGLMCAV
ALLVLILLIVCFIKRSRGGKYPVRDKKDLPLDSVDHKDHDGSFDYHSDEDNKPLQGSQTS
LDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSL
A
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcaggagcggtgggcggcactggcagtgttgtcaataatcttgctgctgtca
aaggtggtggctccaatcgaagtcccactggacccaaagatccagcaagagctcaaacag
ccccccaccattgtgaagcagtcactaaaggactacattgtggaccccagagataacatc
atcattgaatgcgaggctaaggggactccagtgccaacatttctgtggcggaggaatggg
aagttctttaacgtggggaaggacccgcgggtgaccatgcggagtcgttccggaacactg
gagatcagaagcagcgggaaaccggaagattatgaaggagagtaccagtgcttcgcctcc
aatgactttggcacagcgatttccaacaaaatcctactacgagtgtcaaagtctccgctg
tggccgaaggaggttctggagccggtggttgtgcgtgagggcgaatcactcgtcctgccc
tgcaaccctcctcctggtctcccccctcctgaaaccttctggatggacagctccattatg
cccataatacaggacaagagggtgtcaatgggcttgaacggtgacttgttcttctccaat
gttctggctaaagatgccaacactgactacagctgcaacgctcgcttcgagttcacacac
accattcaacaaaagaacccatacacccttaaagtgctaacaaaggaaccatataatgac
acgtttatcaactccactgatctgtatggtgcacgtaatgtaccagaaacccagcccacc
tttctgtctccaaagggcttgtccagctctaagatagtgctccgaggtgaacagcttctt
ctggagtgtatagcagctggagtcccatctcctaacattaattggaataaaaaaggagca
gaactcccgtccaaaaaagtcaagattgagaactttggtaaaactctacgcctcctcaat
gtgtctgaggaggactctggtgactatgtctgcatggccagcaacaaaatgggcagcatt
cgccattctgttgaagtccaggtcaaagctgctccctattggctagataagcccaccaat
ctggtgcttgcccctgatgagaatggacgattagtgtgtcgtgccagagggaaccctaaa
cccactgttcaatggctggtgaatggggaacctattgaaagttcactgccaaacccaaac
cggcaagttcttggtgatacaatcctgttccattcagtccagataggcagcagcgcagtt
taccaatgtaatgcctccaatgaacatggttatctactggccaatgcgtttgtcaacatc
ctggacatggcaccacggatgctaggtccaaagaaccagctgatcaaagtcattgaaaac
aacaggaccttccttgactgccctttctttggctcaccgctccctttactgcgctggttt
aagaatggcctaggcagtggtctggatggtggtcactacaagttgtactacaacggtact
ttggagattaaacaagcccggccagaagaccaaggcacctacacttgtgttgccagtaac
attctgggcaagatggagaatcaggtgcgcctggaggttaaagagcccacaagaatagtg
cgggcacctgaacatgtcacacaggccaaaggaaccacggttcgatttgattgtcgagtt
aaacatgatccttcccttcctgttacggtcacatggctaaaagatgacaagcctctaagc
tttacctggattggccggttcagaaaggatgatgagatcttgactatttccaatgtcaat
ccagaagatgcaggaacctatacatgcactgccaaaactgagatagatgagcactctgcc
tcagctcgccttacagttatagagaatggcctctcgtctgcctcaaatcgtagtgcctct
gcaggtcgacccgacccccctcaggatcttgagctctcggacccttcagcacgtagtgtt
agactcacctgggtgcctgggaatgaaaacaatagtcctgttacgcagttccttgttcag
tttgaagaggacagatgggagccggggaagtggcagaacctgtctatatttgatggtaac
ctaaactcagttaacctgcaactgtcaccctttgtcaactaccagttcagagtgattgca
atcaatgctgtgggccagagtcaacccagccttccctctgcacgctatcagaccagcgga
gcctctcctgatgttgtgccgagtggtcttgaaggctggggaagcaagaagaacaacatg
gagataacatggcaggcacttaagaacacagaaaggaatgggccaaacctgcgatacatg
gtctcatggagaaggaaggacactgaggaagaatggaataacataaccacaaccagaaca
aagcacattattcataatacagacacctatgtcccgtatgagatcaaaatacaggccatc
aatgactttggacacagccctgagtcaaacatagtcattggttactctggggaagataaa
ccatccgctgcaccaacagaactcagggtgtcgaagatcaatagcaccaaagtaaatgtt
cactgggtgcctgtggaccccagcactgtgaacggagagtttaaagagtacaaattgtac
tactggcgggaggccagcctcattaagggcctgaaagtgaacaagacaaagttgcataaa
ggcttcttcaccacggcagaacagccctctggcatcctgacagagctttttccatatagc
aaatataagatgtacatggtggtggctaatagagaatatgagggaccacaaagcaaccct
gtggagttctacaccaaggagggagagccaggggctccaaagtactttaggattcagagg
cacacagacgtggttcacctgaagtgggacaagccccttgagccgaacggtgtcctgata
ggatacacacttcaataccacacagtgaacgggacacaggcgggagagaggaaggcccag
agttttccacccaacgtgacagagtacatcatgaatctgcctaaccgcttcacacggttc
aagttctaccttgcagctcgtactcaggttggagcaggagaagtgtacgccgtggagtca
ccacatttcgctaatgaaggcaccccagatactgactctacagttgtagccgttaacttt
acggatgccttgatgttcgaaactcctcctcctccccctcccctctccactgacccagtc
ccaacaatacttaccccagaaccagccacaccagcccctacaactgctgctccgcccaaa
cctactaccactaccactactacttctactacaaccaccacaactactacaactaccaca
actactaccaccactacaacaacagcttccaccacggttcttcctgttcggcccatgtct
cctaaaacagtggattggaaaatgctggccccgaatgtaaagatctggaatctgaccgtg
gatgctaacaatgactatgctaacgtcagctggaagcacaacttctccgttgacagcagc
gagtttgtgctagagttcacactggacagtaatgcgtcgatgaaaagcatacaagtaaac
caccagcctcccattaagctggctgggctggtggccggggccaagtatcggttgcgggtg
tattcccatgagcacaactccatcagcagcgactatgtcacgttcgagacaggcagagcc
tacaaggagcaggaagacattgctactcagggctggttcattgggctgatgtgtgccgtc
gctctattggttctcatcctgctcattgtttgtttcatcaagaggagtcgtggaggaaaa
tatccagtgagagacaagaaagacctccccttagattctgttgaccataaagaccacgat
ggttcatttgactatcacagtgacgaagacaacaagccattgcaaggcagccaaacatcc
ctggacgggaacgtaaaagagagcgacgacagtctggtggattatggtgaaggaggtgat
ggccagttcaacgaggacggctctttcataggccagtacacagttaagaaggacaaagag
gagaccgaaggaaatgagagctctgaagccacgtcaccggttaatgccatctactctctg
gcatag
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