Onychostoma macrolepis: 131549395
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Entry
131549395 CDS
T09350
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131549395 (ddx19b)
03015 mRNA surveillance pathway
131549395 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131549395 (ddx19b)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131549395 (ddx19b)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131549395 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
131549395
NCBI-ProteinID:
XP_058647521
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All DBs
Position
11:1787806..1795986
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AA seq
479 aa
AA seq
DB search
MASDSWAQAVDEQEAAAESIGSLQINEKDDKLKAEANGAKTEGNGEKTEDDDKDDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENRWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEDTVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagattcgtgggcccaggctgtcgatgaacaagaagccgcagcggaatcgata
ggcagcttgcaaataaatgaaaaagatgacaagctgaaagctgaagcaaatggggcaaag
acagaaggcaatggagagaagaccgaggacgatgataaagacgacaaggcggcacagtca
ctactgaataaactgatccgcagtaatctagtgaacacgaccaatcaagttgaagtcctt
cagagggatccgagctctccgctctactccgtcaagtcgtttgaagagctacgattgaaa
cctcagctgctgcaaggagtgtatgccatgggtttcaacaggccctccaaaatccaggag
actgcgttgcccatgatgcttgcagaacctccacagaatctgatcgctcagtctcagtca
ggcacgggtaaaacagctgcctttgtgctggccatgttaagtcacgtggaccctgaaaac
agatggcctcagtgtctgtgtgtgtcccccacatacgagctcgccctacagacgggcaag
gtcatcgaacagatgggcaaattttaccctgaagtccaactggtgtacgccattagagga
aacaaattggagcgggggacaaaattacaggaacagatcgtgattggcactcctggtact
gttttggattggtgccaaaagcttaaattcatcgaccccaagaagatcaaggtgttcgtc
ttggatgaagctgatgtcatgatcgccacacagggccatcaagaccagagcattcgtatc
cagaggatgcttcctaaaacctgccagatgctgctgttctctgccacatttgaagacacc
gtgtggaacttcgcaaagaggatcgttcccgaccccaacatcattaaactgaagcgcgag
gaggaaactctggacaccatcaagcagtactacgtcatctgcaacagcaaggaggagaaa
ttccaggctttgtgcaacatctacggagccattactatcgcacaggccatgatcttctgc
cacaccaggaaaaccgccgggtggctggcaggagagctgtccagagaaggccaccaggtg
gcgctgctcagcggagagatgcaggtggaacagagggcagcggtcattgaacgtttccgt
gatggcaaggagaaagttctcgttaccactaacgtctgtgctagaggtattgatgtggag
caagtttcagtcgtcatcaactttgatctgccggtggacaaggatggaaaccctgacaac
gagacgtatttgcacagaatcgggcgtactgggcgattcggcaagagggggttggcgatc
aacatggtggacagcagatttagcatgaatatcctcaaccgcatccaggagcacttcaat
aagaaaatcgagaagctggacacagatgatttggatgaaattgagaaaatcgccaactga
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