KEGG   Onychostoma macrolepis: 131549443
Entry
131549443         CDS       T09350                                 
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
omc  Onychostoma macrolepis
Pathway
omc03018  RNA degradation
omc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131549443 (lsm4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131549443 (lsm4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131549443 (lsm4)
   03041 Spliceosome [BR:omc03041]
    131549443 (lsm4)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131549443 (lsm4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131549443 (lsm4)
Spliceosome [BR:omc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    131549443 (lsm4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 131549443
NCBI-ProteinID: XP_058647619
LinkDB
Position
11:25505059..25508265
AA seq 179 aa
MHFCSKQILGFHWPVPTKCTLLSAKQKRTVSGLNLPLSLLKTAQNHPMLVELKNGETYNG
HLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVMSKG
RGRGGMQQNKPQGKGRGGGPGRGGGTGRGIFGGRGRGMTGPGRGQQQDKKPGKPQGVKN
NT seq 540 nt   +upstreamnt  +downstreamnt
atgcacttttgtagtaaacagattttgggctttcattggccagtgccgacaaagtgcact
ttattgtcagccaaacagaagcgcacagtctctggactaaatctccctttatctttactg
aagacagcacagaaccacccgatgctggtggagttaaagaatggtgagacgtacaacggc
catctggtcagctgtgacaactggatgaacatcaacttgagagaagttatttgcacttca
cgggatggagataaattttggaggatgccggaatgttacatcagaggaagcaccattaaa
tacttacgaatccctgatgagatcatagatatggtgaaagaggaagtaatgtcgaaggga
cgtggccgggggggcatgcagcagaacaaaccgcagggaaagggcagaggaggcggacct
ggaagaggtggtggaaccggcagaggtatttttggtggccgtggcagaggcatgacggga
cctggccgtggacagcaacaagacaaaaagcctggaaaaccacaaggtgtcaaaaactaa

DBGET integrated database retrieval system