Onychostoma macrolepis: 131549702
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Entry
131549702 CDS
T09350
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131549702
Transcription factors [BR:
omc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131549702
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
131549702
NCBI-ProteinID:
XP_058648074
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All DBs
Position
11:complement(10219004..10245244)
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AA seq
633 aa
AA seq
DB search
MSCYFRLPHWQVEWFPRDIQKTMKTDQMLLRMCEPSPPALHPHAKGNVTMVGVGIKLEDD
ESGGRVVHRESQQSSPVSDWSVRHLSDRDDSEKSAPPNAQSPLASSPSKDPIRSYTPASQ
DGGSRAHDKSDSKPNVSEVMPTIEKLLNTDWKEKFLGKGLHGSVNLKGTPESLAEKELQL
LLMINQLSGLREQLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKI
NLLQQQIQQVNMPYVMIPAFHPNAQPLPVTSEAQMGLPLQPIPCKPVEYPMQLLTNPHST
PVKRSSGTVFRQDTSQPLNLTAKPKTPSPQALEMAHLQTGYRPRDLPHSPPRSALSLSFL
GEGDVVTQAIHDAQQLLRGGQGPTGRERDRERDNNTRLEASRDRMDDGQSLRTIEDHLSS
DSEGQMAISGVGSFGESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILG
SRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKS
RRQEQRVTYPPSQSEQQLPYPSSEGQYPTTPVSMAPLPLHPALLEHYLPRGLEPPKGQAS
EMREAVRPRQPYSEGEESDAGERSEGELVVLTD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctacttcagacttccacactggcaagtggaatggtttccaagagacatccag
aagacaatgaaaactgaccagatgcttttgagaatgtgtgagcccagtccacctgctctg
catccccacgccaagggcaatgtgaccatggtgggtgttggtatcaagcttgaagacgac
gaatcaggaggtagagtcgtccacagagaatcccagcagtcctctccagtcagtgattgg
tcagttcggcacctgtcagacagagacgactctgagaagtcagcgccccctaatgcacaa
tctcctttggcgagctctcccagtaaagaccctatacgatcatacacacctgccagtcaa
gatggaggcagcagagctcatgataagtctgacagcaagcctaatgtcagtgaggtgatg
cctactattgaaaaacttctgaatacagactggaaagaaaagttccttgggaagggtctt
catggcagtgtcaacctaaaaggaaccccagagagtctggcagaaaaggagcttcagttg
ttgttgatgataaaccagctctctggtctgcgagagcagctgctaggagctcattctgag
cagaggaacatggctgctctgctgctggagaaacagcagcaacagatggaactggcaagg
cagcagcaagaacagattgccaaacagcagcagcagttgatccagcagcaacataaaatc
aacttactgcagcagcagattcagcaggtaaacatgccatatgttatgatccctgccttt
catcccaatgcccaaccgttgccagtcacctctgaagcccagatgggtttgcctctgcag
cccattccctgcaaaccagtggagtatcccatgcagttgctgaccaatccacactccacc
ccagtcaaaaggtccagtggtacagtctttcgccaggataccagtcaacctctcaacctc
acggctaaacccaagaccccaagtccacaggcactggaaatggcccacttgcagaccggg
taccgacccagagatctgccgcacagccctccacgatctgccctcagcctgagcttcttg
ggagagggtgatgttgtgacacaagccattcatgatgcccagcagctgttgcgtggagga
caaggcccgacaggccgagagagagaccgtgagagggacaacaacacaaggctggaggcg
tctcgagaccggatggatgacggacagtccctgcggacgattgaggaccacctcagcagt
gactctgaggggcagatggcgatctctggtgtgggaagctttggtgagtcccggactccc
tcctctggccacatcaaacgtcccatgaacgccttcatggtgtgggccaaagacgaaaga
cgacgtatcctgcaggcgttccctgacatgcacaactccagtatcagcaagatccttggt
tcccggtggaagtccatgtccaatcaggagaagcagccgtactacgaagagcaagccaga
ctgagtcggcagcatctggaacgttacccagactacaaatacaaaccccggccgaagcgg
acctgtatcgtggagggtagacgactgcgggtcggagagtacaaggccatgatgaagagt
cgacgacaggagcaacgagttacttaccctccaagccaatcagagcagcagctaccgtac
ccctccagcgaaggacagtacccgaccacgccggtgtcaatggccccattgcccttgcac
cctgccctcctggagcactaccttcctcggggtctggagcccccaaaaggccaagcgagc
gagatgcgagaggctgtgaggcccagacagccctacagcgaaggggaggagagtgacgcg
ggtgaacgcagtgagggagagctggttgtcctcactgactga
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