Onychostoma macrolepis: 131549742
Help
Entry
131549742 CDS
T09350
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
omc
Onychostoma macrolepis
Pathway
omc04010
MAPK signaling pathway
omc04020
Calcium signaling pathway
omc04218
Cellular senescence
omc04260
Cardiac muscle contraction
omc04261
Adrenergic signaling in cardiomyocytes
omc04270
Vascular smooth muscle contraction
omc04530
Tight junction
omc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131549742 (cacna1da)
04020 Calcium signaling pathway
131549742 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
131549742 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
131549742 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
131549742 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
131549742 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
131549742 (cacna1da)
04270 Vascular smooth muscle contraction
131549742 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131549742 (cacna1da)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131549742 (cacna1da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
CAC1F_C
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
131549742
NCBI-ProteinID:
XP_058648133
LinkDB
All DBs
Position
11:10670117..10798901
Genome browser
AA seq
2114 aa
AA seq
DB search
MSANGPAPPAATPAAPPAASVPVPSVVPVGSLAQKKRQQYAKSKKQGSSANTRPQRALFC
LNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYIPFPEDDSNSTNHDLETVEYAF
LIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEVLTKDGEKEIVGS
HPSVHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLF
VIIIYAIIGLELFIGKMHATCYFQGTDMIAEDEPAPCAVNGHGRTCPINGTVCKEGWHGP
NGGITNFDNFMFAMLTVFQCITMEGWTDVLYWMNDAMGLELPWVYFVSLVIFGSFFVLNL
VLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEDEESK
RNRVTLASLMEKKKKGFSWFSQSSDTHASMPASETESMNTENEKVEDEKATCCGPTCQKI
SKSKFSRRWRRWNRLCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPMWLTQVQD
VANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVEFEIMSPLGIS
VFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKF
NFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF
ICGNYILLNVFLAIAVDNLADAESLNTDNDDKKKGDEIEENEDDAKAGEEDEKDNAEEDE
EEPDVPAGPRPQISELVKKEKITPIPEGSAFFIFSSTNPIRVACHKLINHHIFTNLILVF
IMLSSASLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKVLGYADYVFTSMFTFEIV
LKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAI
NRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCNDDTKPSPEEC
KGTYILYKEGDVNQPVIQKRHWHNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNR
ENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQC
VEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNY
VMDILNMVFTAVFTVEMVLKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAP
QVDESGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAM
LFFIYAVIGMQVFGKIAMVDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGK
LCDPESDYSPGEEMTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGP
HHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLN
SDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDD
EVTVGKFYATFLIQDYFRKFKKRKEEGLVGVHPAQNNTAIALQAGLRTLHDIGPEIRRAI
SCDLQDDELVDFIPEEDEEIYRRNGGLFGNHINHINGDPRRSSGHQTNATQRPLQVQPPP
HYAHMEQPVGRLGRANAMAQQNHHRHHHHHHHHHHHHNSYNKSPKSTNINLNNANVSSLP
NGGHNRYYEHMPANGYPGSYYGEYDKPRTPHGQRRRYYETYIRAQGSDRRRPTIRREEEY
EEDRYSGEYYSGEEFYEDDSMLSGDRYPNSDQEYETPRGYHHPDSYYEDDEQPLYHDSRR
SPKRRLLPPTPQGNRRPSFNFECLRRQSSQDDLPHQRTALPLHLMQHQVMAVAGLDSSRA
HRLSPTRSTRSWASPPPTPASKDRTPYYTPLIRVDRPLRDSAHSSHSSIRKSSWYTDDPE
YQRNYSPVHLQVPPEYRNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADA
CAMTIDEMESAASHLLNGGITPGVNGVNVFPIMGPRDYEMQDVSASYSDEEPELEPRLQY
EEDLADEMICITTL
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacggccctgctccgcctgctgcgactcctgccgcaccccccgcagcctcc
gtgcctgtaccgtcagtggtaccggtcggctcgctggcccagaaaaagcggcagcagtat
gccaagagcaaaaaacagggcagttcggccaacacgcggccgcagagagctctcttctgc
ctcaacctcaacaaccccatccgccgggcctgcatcagcctcgtggaatggaagccattt
gatatctttatattaatagcgattttcgccaactgcatggccttagctgtatacatcccc
tttcccgaggatgattccaactcaaccaaccacgacctggaaacagtcgaatatgccttc
cttatcattttcactatcgaaacctttctgaagatcatagcgtatggcttggtgatgcat
cagaacgcgtatgtccgaaacggatggaacatgctggatttcgtcattgttgtcatagga
ttgtttagtgttgtcttggaagttctgaccaaagatggggagaaggagattgttggaagc
cacccatctgttcatggccatggagggaaacctggaggtttcgatgtcaaagccctcaga
gcctttcgagtgctgcgaccgcttcggctggtctcaggagtgcccagtttgcaggtggtg
ctgaactccatcattaaagccatggttcctctcctccacatcgccctgctggttctgttc
gtcatcatcatctacgccattattggtttggagcttttcattggaaaaatgcacgctacc
tgttattttcaagggacagatatgatagcagaggatgaacccgcgccgtgtgccgttaat
ggtcacggccgcacatgccccattaacggcactgtgtgtaaggagggctggcacggcccc
aacggaggcatcacgaacttcgacaacttcatgtttgccatgcttaccgtgttccagtgc
atcaccatggagggctggactgatgtgctctactggatgaatgatgctatggggttggag
ctgccctgggtgtactttgtgagcttggtcatcttcggctctttcttcgtcttgaacctg
gttctgggtgtgttgagcggggagttctctaaagagcgagagaaggcgaaggctcgtgga
gatttccagaagctacgggagaaacagcagctggaggaagatctgaaaggttatctggac
tggatcacgcaagcagaagacatcgaccctgagaatgaggaggaagatgaggaaagcaaa
cgcaaccgggttacgctggccagcctgatggagaagaagaagaaagggtttagctggttc
agccagtcctctgacactcatgcgagtatgccggcaagtgagaccgaatccatgaataca
gaaaatgagaaagtggaagatgagaaggcaacatgttgtggcccgacatgtcaaaaaatt
tcaaaatcaaagttcagtcggcgctggcgtcgctggaaccggttgtgtcggaggaattgt
cgtttggctgtgaaatctgtgccgttctattggctggtgatcatcctggtgttcctcaac
actttgaccatctcttcagaacattacaaccagcccatgtggctaacgcaagtccaggat
gtggccaataaagtgctgctggccctgttcacgtgtgagatgttggtgaagatgtacagt
ctgggcctgcaggcttattttgtgtctctgtttaatcgctttgactgcttcgtggtgtgt
ggaggcatcacagagaccatcctagtcgagtttgaaatcatgtcacctttaggcatctca
gtgtttcgatgtgtgcgacttctcaggatctttaaagtcacacgtcattgggcgtctctc
agtaacttggtggcgtctctgctgaactccatgaagtccatcgcttctctactgctgctg
ctcttcctcttcatcatcatcttcagcctcctcggtatgcaggtattcggcggcaagttt
aacttcgacgagacacaaacgaagaggagcacctttgacaacttccctcaggccttgctc
actgtgtttcagatcctgactggtgaagactggaatgccgtcatgtacgatggaattatg
gcgtacggcggcccatcatcgtcaggaatgattgtgtgcatctactttatcattctcttc
atctgtggaaactacattcttctgaatgtgttcttggctatcgctgtggacaaccttgcc
gatgcagagtctctgaacacagacaacgatgataagaagaaaggtgatgaaatcgaggaa
aatgaagatgatgccaaggctggagaggaagatgagaaggacaatgcagaggaggatgaa
gaagagccggacgttcctgcggggccccgcccacagatctcagagcttgttaagaaagag
aaaatcacgccaatcccagagggcagtgcattcttcatctttagcagcacaaacccaatt
cgtgttgcgtgccacaagctgataaaccaccacatcttcaccaatctcatcctcgttttc
attatgttaagctccgcctccttggcagctgaggacccaatcagaaacttctctgcccgg
aatattatacttggttactttgactatgctttcacggctatctttactgtagagatcgtg
ttaaaggtcctaggctatgcagattatgtcttcactagtatgtttacatttgagatcgtg
ttgaagatgaccacgtatggcgcgtttctccacaagggggctttctgcaggaactacttt
aatcttctcgatctgctggtggtcggcgtgtcactggtgtccttcggaattcaatcgtcg
gccatctcagtggtgaagattctgagggttcttagagtgctgcgtccactcagggccata
aacagagctaaaggactgaagcatgtggtccagtgtgtgtttgtggccatcagaactatt
ggaaacatcatgattgtcaccacactgttacagttcatgtttgcctgcattggtgtacag
ctcttcaaggggaagttttatcgttgtaatgatgacaccaagcccagcccagaggagtgc
aagggaacatatatcttgtataaggaaggagacgtgaaccagccagtcattcagaagcgc
cattggcacaacagcgatttcaactttgataacgtgctcatggccatgatggctctattc
acagtgtccacgtttgaaggctggccagcgttgttgtacaaggccatagactccaaccgg
gagaacttgggtcccatctacaactaccgtgtggagatttccatcttcttcatcatctac
attatcatcatcgccttcttcatgatgaacatcttcgtgggtttcgtcatcgtgaccttt
caggaacagggagagaaagagtacaagaactgtgagctggacaagaaccagcgtcagtgt
gtggagtatgcgttaaaagcgcgtcctctcaggaggtacatcccaaagaacccgtatcag
tataagttctggtatgtggtgaactccaccggcttcgagtacatcatgtttgtcctgatc
ttactcaacaccatctgtctcgccgttcagcactatggccagtccgagctgttcaattat
gttatggacatcctgaatatggtcttcactgccgtcttcactgtggagatggtactcaaa
ctgatcgccttcaaaccccggcattatttcactgacgcatggaacacgtttgacgcctta
attgttgtcggtagcgtcgtagatattgctatcactgaagtcaaccccacagaggcacct
caggtggatgagtcggggaacactgaggacagcgcccgcatttcaatcaccttcttccgt
ctttttcgagtgatgcgattggtcaagctgctgagcaggggggagggcattcgaaccctt
ctctggaccttcatcaagtccttccaggccctgccatatgtcgctttgctgatagccatg
ctgttcttcatctacgctgtcattggcatgcaggtgtttgggaaaattgccatggtggac
cacacacaaatcaacaggaacaacaactttcagacgttccctcaagctgtgcttctgctc
ttcagatgtgcaacaggtgaagcctggcaggagatcatgttggcatgcatgccagggaag
ctgtgtgacccggagtcagattatagtcctggagaagagatgacctgcgggagcaacttt
gccatcatctacttcatcactttctacatgctctgcgcctttctgatcattaacctgttt
gtggctgtcatcatggacaactttgactatctgacccgtgattggtcgattctggggcca
catcatcttgatgaatttaagaggatttggtcagagtatgatccagaggccaaaggcaga
ataaaacatcttgatgtagtgacgttgttgcgccgtattcagcctcctcttggctttggg
aaactctgtcctcatagagtcgcctgcaagaggctggtggctatgaacatgcctctgaac
agtgacggcacggtcatgtttaatgctacactttttgctcttgtgagaactgcactgaag
atcaaaacggaaggtaacctagagcaggcgaatgaagagctccgagccgtgattaagaag
atctggaagagaacaagcatgaaacttctggatcaagtggtgccccctgctggtgatgat
gaggtaacggtggggaagttctatgccactttcctgatacaggactactttaggaaattc
aagaaacgcaaagaggaaggcctggtgggcgttcacccagcacagaacaacaccgccatc
gccctgcaggctggccttcgtacgctgcatgacattgggccagaaatccgccgtgcgata
tcatgtgacctgcaggatgatgagctagtagactttataccagaggaggacgaagaaatt
tataggcgaaatggaggactctttggcaaccacatcaatcacataaatggagacccccgg
aggagctccggccaccagacaaacgctacacagcgccccctgcaggttcagccgcctcca
cattatgcccacatggaacagcccgtggggcgtctgggccgcgccaatgccatggcgcag
caaaaccatcatcgccaccaccaccaccatcatcaccatcatcatcatcacaactcctac
aacaagtctcccaagtctaccaacatcaatctcaacaacgccaatgtgtccagcttaccc
aacggaggacacaatcgttactatgagcatatgcccgctaatggttacccggggtcgtac
tacggagaatacgacaagcccaggaccccacacggacaaagaaggcgctactatgagacg
tatattagggcgcagggcagcgacagaagacgacccactatacgccgcgaagaggagtat
gaagaagatcgttactctggagagtactacagcggagaggagttttacgaagatgacagc
atgctgtcgggtgacaggtaccccaacagtgaccaggaatacgagacgccacggggttac
catcatcctgacagttactatgaggatgacgagcagcccctttatcatgattcacgtagg
tcaccaaagagaagactgcttcctccaacaccgcaaggtaatcggagaccgtcgtttaat
tttgagtgtctgcgcagacagagcagtcaagacgatcttcctcaccagcgcaccgctctt
ccattacatctcatgcaacaccaggtgatggcggtagcgggtctagactccagcagggct
cacaggctttcacctactcgatctaccagatcatgggcatcacctcctcccactcctgca
agtaaagaccgaacgccatactacacgccgcttatccgcgtggatcgtcctctgagggac
agcgcccacagcagccactcatctatcaggaagagctcatggtatacagacgaccctgag
taccagaggaactactcgcccgttcacctacaggttccacccgagtacagaaaccagtac
caccagaagagaggcagcgctaccagcctggtagaggcggtcttgatatcagaaggactg
ggtcgctacgccaaggatccgaagttcgtggcggccacgaagcatgagatcgcagacgcg
tgcgcaatgaccatcgacgaaatggagagcgccgccagccatctcctgaacggtggcatt
acgccgggagtcaacggtgtcaacgtctttcccataatgggccccagagactacgagatg
caggatgtctcggctagctacagcgacgaggaaccagaactcgaacccagactgcagtac
gaggaggacctggcggacgaaatgatatgcattaccactttatag
DBGET
integrated database retrieval system
