KEGG   Onychostoma macrolepis: 131549941
Entry
131549941         CDS       T09350                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
omc  Onychostoma macrolepis
Pathway
omc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    131549941 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131549941 (cstf1)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     131549941 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta CSTF1_dimer Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_NWD2_C Ge1_WD40 PROPPIN Beta-prop_SPT8 Beta-prop_WDR75_2nd DUF7099 Frtz
Other DBs
NCBI-GeneID: 131549941
NCBI-ProteinID: XP_058648524
LinkDB
Position
11:16357026..16362967
AA seq 438 aa
MHQAAAKMFRPKPTLRDRQHLYKLIISQLLYDGYTTIANSLISEVKPQTVVSPSEQLMQL
AKTGMENDDSAVQYAIGRSDNVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRV
ATYSRDGQLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHV
DEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLL
VGTQHPTLRLYDVNTFQCFVSCNPLDQHTDTICGVCYNPSANSYVTCSKDGSIKLWDGVS
NRCVTTFEKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQ
THRTQCVFNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFM
TCSDDFRARFWYRRTTTD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcatcaagcagcagcaaagatgttccggcccaagcccacactgagggacagacagcac
ctttacaagctgatcatcagccagctgctgtatgacggctacaccaccatcgccaacagc
ctgatcagtgaggtgaagccccagactgtggtgtctccatcagagcagctcatgcagctg
gccaagacaggaatggagaacgatgacagtgcggtacagtacgccattggccgctcggac
aacgtggcgcccggtgtgggcatcgacctggaatttgatgcagacgtgcaaaccatgtcc
ccagaagcatcagagtatgagacctgctatgtgacatctcataagggtccgtgccgtgtg
gccacctacagccgcgatgggcagctcatagccacgggctctgctgacgcctccattaag
atcctggataccgagcgcatgctggccaaaagcgccatgcctcttgaggtgatgatgaac
gaaacggcccagcagaacatggagaaccaccctgtaatcagaaccttgtatgatcatgtg
gatgaggtcacatgccttgcttttcacccgaccgagcagatcttagcctctggctctcgt
gattacaccctcaagctctttgattattcaaagccgtctgcaaaaagagccttcaagcac
atacaggaagctgaaatgttgcgttccatttccttccatccatctggggatttcttacta
gtcggcacgcagcacccaaccttgcgtctttatgacgttaacactttccagtgttttgtg
tcctgcaaccctctggatcagcacactgacaccatctgcggagtctgttacaatcccagc
gctaacagctacgtcacctgtagcaaagacggcagcatcaagttgtgggacggagtgtcg
aaccggtgcgtgaccacgtttgagaaagcccacgatggtgctgaggtctgctcggctgtt
ttctccaagaattccaagtatattctgtccagcgggaaggattctgttgctaaactctgg
gaaatctccacaggccggactttggtcaagtacacaggtgcgggtctcagtgggcgacaa
acgcaccgcactcagtgtgtgttcaaccacacggaggactatgtgctgctgccggacgag
cgaaccatcagcttgtgctgctgggattcacgcacagctgagaggaaaaacctgctctca
ttaggccacaataacattgtgcgctgtatcgtccattcacccaccaaccccggcttcatg
acctgcagcgacgacttcagagcacgattctggtatcgccgcaccaccactgactag

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