Onychostoma macrolepis: 131550060
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Entry
131550060 CDS
T09350
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131550060 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131550060 (taf5)
03036 Chromosome and associated proteins [BR:
omc03036
]
131550060 (taf5)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131550060 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
131550060 (taf5)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131550060 (taf5)
STAGA complex
131550060 (taf5)
TFTC complex
131550060 (taf5)
SAGA complex
131550060 (taf5)
SLIK complex
131550060 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
VPS8_N
WD40_like
PROPPIN
LisH_PAC1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
131550060
NCBI-ProteinID:
XP_058648557
LinkDB
All DBs
Position
01:complement(14511852..14520069)
Genome browser
AA seq
741 aa
AA seq
DB search
MAAVQDGPMELDAEKETKPEILSDGTSNLSGNTASGTLSSSPLTAGGAPKQEDQQTLIAV
LQFLKRNKLTESVEILRREAGLEEQEDSQTLDGSGGGKSEGDGGDANSLLSRVSIASAAA
PQSTLTPMPVKNDQRQPDVSVVLSAYSQQGDPSLYQVYYSDLKNFIESVLDCHRAELSQL
FYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYHDDLRILCGLTKKEHLKGNEALLD
FRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMSRSQNQIDSMSGSF
AGEAKREVNKAKVFYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSMGSKSKKQDP
NAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLGPENLPSICFYSFLNSYQGLTAVDFT
DDSSLLAGGFADSTVRVWSVTPKKLRKVKSAAELNLIDKESDDVLERIMDEKTASESKIL
CGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTVRLWDVLNG
NCVRIFAGHKGPIHCLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIYALKF
SRDGEILASGSMDNTVRLWNSMKAFDEVETDDFTAATGHIHLPDNSQELLLGTYHSKSTP
VTHLHFTRRNLLLATGAYNSQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggaccgatggagctggacgcggagaaagagacaaagccagaa
atcctcagcgatgggacgtcaaacctctcggggaacacagcgagcgggacgctgtcctca
tcgcccctcaccgccggcggagccccgaagcaggaggaccagcaaactttgatcgcagtt
ctgcagtttctaaagcggaataaactgacggagtcggtggagatcctgcggcgggaagcc
ggtttagaagaacaggaggactcacagactctcgatggcagcggaggagggaagagtgag
ggggacggaggggatgcaaactctctgctcagccgggtgtccatcgcatcagcagccgcc
ccccaaagcacactgactcccatgccagtcaagaatgaccagcggcagccggatgtcagt
gtggtgctgtcagcgtacagccagcagggggatccctctctgtatcaggtgtactacagc
gacctgaagaacttcatcgagtccgtgctggactgtcaccgagcggagctgtcccagctc
ttctaccctctgttcgttcacatgtacctggagctggtctacaacaaccatgaaaatgaa
gcaaaggctttctttgagaagttcagcggcgatcaggagtgttactatcatgatgacctg
cgaattctctgcggcctcactaagaaagagcacctgaaggggaacgaggcgctgctggac
ttccgcaccagccgcttcgtgctgcgcatctcccgagactcgtaccagctgctcaagaga
cacctgcaggaacggcataataaccagatatggaacatcattcaggagcacttgtacatc
gacatcttcgacggtatgtcccgcagccagaaccagatcgacagcatgtccggcagtttt
gcgggagaggccaaacgagaagtcaataaagccaaggtattctacgggctgctaaaggag
ccagagattgaggtcccgttagatgatgaagatgatgaagcagagaatgaggaagggaag
cccaagaagaagaaaacaaaaaaggacagtatgggctccaagagtaagaaacaagacccc
aatgctcctcaacagaacaggatccctctgccggagctgaaggactcggacaaactggac
aagatcatgtacatgaaggagagcaccaaaagaatccggctcggcccggagaacctgcct
tccatttgcttctattcgttcctcaactcctaccagggtttgacggcagtagacttcact
gatgactccagtctgttagcgggaggctttgcagactctacagtccgcgtatggagcgtc
acacctaagaaattacgcaaggtcaaatctgcagcagaactgaatctgattgataaagag
tctgatgacgttctggagaggatcatggatgagaagacggccagtgagtccaagatcctc
tgcggtcacagcgggccagtgtacggtgtcagcttcagtccagacaggaactatctgttg
tctagttctgaggacggtacagtcagactgtggagcttgcagacgtttacgtgtctcgtg
gggtataaaggacataactacccagtgtgggacactcagttctcaccctttggttattac
tttgtgtctggtggacatgacagagtagcacgcctctgggcgacagatcattaccagccg
ttgcggatatttgctgggcatctagctgacgtcacctgcacgcgattccaccccaactct
aactatgtggccacaggctcgaccgaccgcactgtacgcctctgggatgtcctgaatgga
aattgtgtccgcattttcgcaggtcacaaggggcccatccattgtctagcattctcaccc
aatggaaagttcctggcgtctggatccacagacgggagagttttactgtgggatattgga
catggactgatgatcggagagctgaagggtcacacagacacaatttatgccctcaagttc
agcagagatggagaaatcctcgcatcaggatctatggataacaccgttcggctatggaac
tccatgaaggctttcgatgaagtggagacagacgacttcaccgcagcaacgggtcacatt
catctgccggataactcccaggagctactgctcgggacgtaccacagcaaatccacacct
gtcacccacctccatttcaccagacgcaacctgctactggccacaggcgcgtacaactcc
cagtga
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