Onychostoma macrolepis: 131550869
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Entry
131550869 CDS
T09350
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
131550869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131550869
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
131550869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
131550869
NCBI-ProteinID:
XP_058649318
LinkDB
All DBs
Position
12:1813527..1915627
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AA seq
1371 aa
AA seq
DB search
MLPTEEPEDDDGDEKRLSTIMTYPSSVRNMAVIIPYTSDIPCDPKGQRMWWAFLASSMVT
FFGGLFIILLWRTLKYLWTVCCHCKGKKKDVHRVSNPVVLGDGVIKVVGHRESEAAASEV
GWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSKPIESCQHFDKDYTLQ
IDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRA
LRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQP
LSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKK
YGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALF
KRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYH
PKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLF
SMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLIAIEYK
SDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCK
RTKKSAYKRMHLACCVACGGAERGCSCMSDSVASNMEVLHRGFPFSPVSLYDNTTTLCSS
KSNYNGYIKSINDELSPTFQPQNPKPALMRAQCAVRVPPAVPGVRVSVPLVNNRKGSLLS
PAALYLHRLSLASSRELYQNSSTGTGASDATRLHRACSLPVKYRYHSSHGSTSTIGPHTF
LVEEEQQSALSPKKKQRNGGMRTSPTCSPKITRHDPLLVPGHDQMETMDENIKKYDSTGM
FHWCPSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHEL
KPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNID
DASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLVRQASIT
TGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFND
NILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLG
DGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQCTKRYVITNPPYGFELVPTDLIFC
LMQFDHNAGQTRTNLSTHSTYCPSKKSPSAHSIPSSARPGRSRSRDLRDKQNAPRTNRGV
SDKNWYTDEPENSFPRNTQTKHTSTHTANQTNQYKPTSNIIQPIREVEEEP
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgaagaaccagaagatgatgatggtgatgagaagcggctctccacaata
atgacttatccgtcctcggttcggaacatggctgtgatcatcccctacaccagtgatata
ccctgtgaccccaaaggccagaggatgtggtgggctttcctcgcctcctccatggtcact
ttcttcgggggtctgttcatcatcctgctgtggaggaccctcaagtacctgtggacggtg
tgctgccactgcaagggtaaaaagaaggacgtgcaccgggtcagtaacccggtggtgctc
ggtgacggtgtgattaaagtggtgggtcaccgggagtccgaggcggcggccagcgaggtg
ggatggatgacctcagtgaaggactgggccggggtcatgatctctgctcagacgctcacg
ggacgcgtgctggtggtgcttgtcttcgctctgagcatcggagcacttgtgatttacttc
atcgactcctccaaacccatcgaatcctgtcagcatttcgacaaggactacacattgcag
atcgacatggccttcaacgtgtttttcctcttgtactttggactgcgtttcatcgcagcc
aatgataagctatggttctggctggaggtgaattcagtggtggatttcttcaccgtcccg
cctgtgtttgtgtctgtgtatctgaacaggagctggctgggattgaggttcttaagagcc
ttgaggctgatccagttttcagaaatattacagtttttaaatatcttaaaaacaagcaac
tccataaagttggtgaatttgtgctcaatctttataagcacatggctgacggcagcgggc
ttcatacatttggtggaaaactcaggggatccttgggaaaatttccaaaattcccaaccg
ctttcctactgggagtgtgtgtacttactcatggtaaccatgtccacagtgggttatgga
gatgtttgtgctaaaacaaccctcggccgccttttcatggtcttcttcattctcggagga
ttggccatgtttgccagctacgttcctgaaatcatagagttaataggaaaccgcaagaaa
tatggtggttcctatagtgcagtaaatgggagaaagcatatagtcgtctgcggtcacatc
acactggagagcgtctccaacttcctcaaagacttcctacacaaggacagggatgatgtc
aatgtagaaatagtttttctccataatatttcccctaatcttgagctggaagccttattc
aagagacacttcacacaggtggagttttaccaggggtccgtcctcaaccctcacgatctc
gctcgagtcaagattgagtcggccgatgcctgtctgatcttagccaataaatattgcgca
gatcctgacgctgaagatgcatccaatatcatgagggtgatatccattaaaaactaccat
ccaaagatccgaatcattacacagatgctgcagtaccacaataaggctcatcttctcaac
atcccgagctggaactggaaggagggcgatgacgccatctgcctcgccgagctgaagctg
ggcttcatcgctcagagctgcctggcccagggtctgtccaccatgctggccaacctcttc
tccatgaggtcctacatcaagatcgaagaagacacatggcagaagtattatttagaggga
gtagccaatgaaatgtacacggagtatctgtccagtgccttcgtgggtttgtctttcccc
acagtttgtgaactctgctatgtgaagctgaaactccttctgatcgcgatcgagtataaa
tcggaccagagagaaagcagcacgctgattaacccgggcaatcatgtgaagatgcaggag
ggaacgctgggcttcttcatcgccagtgatgccaaagaggtgaagagggcacttttctac
tgtaaagcttgtcacgatgacattacagacccaaaacggatcaagaagtgtggatgcaaa
cggaccaagaagtccgcctacaagagaatgcatctggcatgttgtgtagcttgcggtggg
gcagaacgtggctgctcgtgcatgtcagacagtgtggctagtaacatggaggttctgcac
cgtggcttccccttctctcctgtgtctctgtatgataacacgaccactttatgctcctct
aaaagtaactataacggatacatcaaatcaataaatgatgagctcagtccaacattccag
ccccagaatcccaaacccgccctaatgcgagctcagtgcgcagtgagagtgcctcctgct
gtcccaggcgtccgtgtgtcagtgcctttagtaaataaccgtaaaggcagtctgctgtct
ccggctgccttatacctgcacagactcagtctggccagctctagagagctgtatcagaac
agcagcactggcacaggagcatctgatgccacccgcctgcatcgggcctgtagtctgcct
gttaaatacagatatcattccagccacggctccacctccaccatcggcccgcatacgttc
ttagtggaggaggagcagcagtcggctctgtcgcccaagaaaaaacagcgtaacggagga
atgagaacgtcgcccacatgctcacccaaaataacaaggcacgacccgttgttggtccct
ggacatgatcaaatggaaacaatggatgagaacataaagaaatatgattcgacaggaatg
tttcactggtgtccatcaaaagacatagagaaggtcatcctgactcgcagcgaggcggcg
atgacggttttgagcggtcatgtggtggtttgtatattcggggatgtgaagtcggctctg
atcggtctgcgtaacctggtgatgcctctgagagccagtaacttccactatcacgagctg
aagcccatcgtgttcgtgggctctctggagtatctcaagagggagtgggagacgctacac
aacttccccaaagtctccatcttacctggaactccactgagtcgggccgatctgagagcc
gtcaacatcaacctgtgtgacatgtgcgtcatcctgtcggccaatcagaacaacatcgac
gacgcctctctgcaggataaggagtgtattctggcgtctctcaacatcaagtccatgcag
tttgacgacagtattggactcttacaggccaactctcaaggtttcactcctcctggcatg
gatcgctcgtctccggagaacagtcccgtacacggattggtgcgacaggcgtccataacc
accggagcaaacattcccatcatcacagagctcgtgaatgactcaaacgtccagtttctg
gaccaggacgatgacgacgatcccgacacggagctgtacctcacgcagccgttcgcctgt
gggacagcgttcgccgtcagcgtgctggattcgttaatgagtgccacgtacttcaatgat
aacattctgaccctgatccggacgctggtgaccggcggagctacgccggagctggagggt
ctgctggcggaggagaacgcgctgcgcggaggatacagcactccacagacgctggccaac
agagaccgctgccgcgtcgcacagctggcgctttacgacggacccttcgctgatctgggg
gatggaggctgttatggtgatttattctgtaaagcattgaagacgtacaacatgttgtgt
tttggaatctaccgattaagagacgcacatctgggagcacccagccagtgcaccaaacga
tacgtgatcacgaatcctccgtatggcttcgagctggtgcctacagatctgatcttctgc
ctgatgcaattcgaccacaacgccggccagacgcgcaccaacctgtccactcactccacc
tactgccccagcaagaagagcccatccgcccactccatcccctcatccgcccggccgggc
cgcagccggagccgcgacctgcgcgacaaacagaatgcgcccaggaccaatagaggggtt
tcagataaaaactggtacacagacgaacctgagaacagcttccctagaaacacacaaacc
aaacacaccagcacacacacagccaatcagaccaatcagtacaaacccaccagcaacatc
atccagccaatcagagaagtggaggaggagccttga
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