Onychostoma macrolepis: 131550941
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Entry
131550941 CDS
T09350
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131550941 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
131550941 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131550941 (lsm5)
03041 Spliceosome [BR:
omc03041
]
131550941 (lsm5)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131550941 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
131550941 (lsm5)
Spliceosome [BR:
omc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131550941 (lsm5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
131550941
NCBI-ProteinID:
XP_058649452
UniProt:
A0A7J6CHI1
LinkDB
All DBs
Position
12:21825695..21830117
Genome browser
AA seq
91 aa
AA seq
DB search
MAAIAATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatcgcggcaacgaatccctcgcagcttttacctctcgagctggtggataaa
tgcattggctcacggattcacatcgtcatgaagaacgataaagagattgtgggaactctg
ctcggatttgatgactttgtcaacatggttcttgaggatgtgacagagtttgaaatcact
ccagaaggaagaagaatcacaaagctggatcagattctactgaatggcaataacatcaca
atgttgattccaggaggagaaggaccagaagtgtga
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