Onychostoma macrolepis: 131551269
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Entry
131551269 CDS
T09350
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131551269 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131551269 (dhx8)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131551269 (dhx8)
Spliceosome [BR:
omc03041
]
Complex C
Other components
Step II factors
131551269 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Flavi_DEAD
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
131551269
NCBI-ProteinID:
XP_058650065
LinkDB
All DBs
Position
12:12505915..12516383
Genome browser
AA seq
1218 aa
AA seq
DB search
MAEIGEDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNPSIDGFKSVLVKN
GADFTDSLVSNLLRLIQTMRPPAKASTSKASHAVAKPKSEKDKLKDLFPALCRPDNPNTR
SMLDENDVKVAADAMKELEMFMPSVSGTEPSSSKHRSESSSKKKRRSRSRSRSRDRDRDR
DRDRDRDRDRDRRRRHRSRSRSRSRSNERDRRKRRSRWHSRSRSRSPARGDRDRDKDKDK
DKGSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRR
EGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGEGQEET
AMRNPDRPTNLNLGHAPEVEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEE
TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSAL
AKERREVKQAQREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHA
FGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYL
AEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMT
DGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDA
VKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTG
QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA
ETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRL
YTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLY
TLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPK
DKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM
LGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAGKKDPQEGYRTLIDQQVVYIHPSSALF
NRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLY
NRYEEPNAWRISRAFRRR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcggggaagatgagctcaaaaagctcgaatatttgtctttggtgtctaaa
gtgtgtaccgaacttgacaaccatttaggaatcaacgataaagatcttgctgagtttgta
atcagtcttgctgagaaaaatccatccattgatggatttaagtcagtgctggttaaaaat
ggagccgatttcacagattcactcgtcagcaatttgcttcgtctcattcaaaccatgcgt
cctcctgcaaaagcatctaccagtaaagcctctcatgctgtggctaagccaaagagtgaa
aaggacaagctgaaagatctgtttccagctctgtgcagacctgacaatcctaatactagg
agtatgctggatgagaatgatgtgaaagttgctgctgatgccatgaaagagttggagatg
tttatgcccagtgttagtggtacagaacctagcagcagtaaacacagatctgaaagcagc
agtaagaagaagcggaggagcagaagtcgcagtcggagcagagatagagatagggacaga
gacagggacagggacagggatagggacagagacagacggagacgccatcgctctcgctcc
cgttccagatctcgctctaatgagagagacagaaggaagcgcaggagccgctggcactct
cgcagcaggtccaggagtcctgcacggggagaccgagaccgagacaaagacaaagacaaa
gacaaaggctcagaccgctggaaggacaagcatgtggaccggccccctccagaggagcca
tctgtgggggatatctacaacggcaaagtcaccagtattatgcagtttggctgctttgtg
cagttggaaggccttagaaaacgctgggaaggcttggtccatatttctgagctcaggaga
gaaggtcgggtagcaaatgtggcagatgtggtcagcaaaggtcaaagggtcaaagtcaag
gtgttgtccttcactggatccaaaacaagtctcagtatgaaggacgttgaccaggatact
ggtgaagacctgaaccctaacaggaggagaaatgtgggtggagaaggtcaggaagaaacg
gccatgaggaatcctgacagacctacaaacctgaacctgggccatgctccagaggtagag
gatgacacattggaacgcaaaagactcaccaagatctctgatccggagaagtgggaaatc
aaacagatgattgctgccaatgtgttgtctaaggaggaattcccagactttgatgaagag
acaggaattctgcctaaagtagatgatgaggaagatgaggacttggagattgagctggtg
gaagaggaacctccattcctgaggggacacaccaaacagagcatggacatgagtcctgtc
aagattgtcaagaaccccgatggatctctctcccaagcagccatgatgcagagtgccctg
gccaaagagcgacgggaggtgaaacaggcccaacgggaggctgaaatggactcgatcccc
atgggcctaaacaaacactgggtggacccactgcctgacgctgacggcaggcagatagct
gccaacatgaggggcataggtatgatgcccaacgacatcccagaatggaagaaacacgcc
tttggtggcaacaaggcctcctatggaaaaaagactcaactttccatcctagagcaaaga
gagagtcttcccatctacaagctgaaagagcagctcattcaggctgtccatgacaaccag
atcctaattgtgatcggtgagacgggctcaggaaagaccactcagatcactcagtacctg
gctgaggctggatacaccacacgggggaagatcgggtgcacacaacccagaagagtggca
gccatgtctgtggctaaaagagtgtcagaggagtacggttgctgtttaggtcaagaggtt
ggctacaccatccgttttgaggactgcacaagtcctgagactgtcattaagtacatgacg
gacggtatgctgttaagagagtgtctgattgaccctgatctgggccagtatgccatcatt
atgttggatgaggcccatgagagaaccattcacacagatgtgctctttggcctgctcaag
aagactgtacagaagcgaactgacatgaagctcatcgtgacatctgctacgctggacgct
gtgaaattctcacagtacttttatgaagcacctatttttactattcctggtcgtacatat
ccagtggaggttttgtacactaaagaacctgagactgactatctggatgccagtctgatc
acagtcatgcagattcacctcactgagcctccaggtgacatcttggtgttcctgacgggt
caggaggagatcgacactgcctgtgagatcctgtacgaacgaatgaaatcacttggtcct
gatgtcccagagctgatcatcctcccagtatactctgccctgcccagtgaaatgcaaacc
aggatctttgacccagcaccacctggaagtagaaaggtggtcattgctactaacatcgca
gagacttctttgacaattgatgggatctactatgtggtggatccaggttttgtcaagcag
aaggtttataactccaaaactggcattgatcagctagtggttacccccatctcccaggct
caggctaagcagcgagcgggcagagcaggtagaacaggccctgggaagtgctacagactc
tacacagaacgtgcctacagagatgagatgctcaccaccaacgtacctgagattcagaga
actaacttggccagcactgtactatctctaaaggcaatgggcatcaatgacctgttgtca
tttgatttcatggatgctccgcccatggagacgctcatcacagccatggagcagctatac
actctgggagcgttggatgatgaaggcttgcttacacgcctcggtcgtagaatggctgag
tttcctctagagcccatgctttgtaagatgttgatcatgtccgtccatcttggctgcagc
gaagagatgctgaccattgtgtccatgctttcagtacagaatgtcttctacagaccaaag
gacaagcaagctctggcagaccagaagaaggctaagtttcaccagcctgagggggaccac
ctgactttgttggctgtctacaactcctggaagaacaacaagttttccaacccctggtgc
tacgaaaacttcatccaggcgcgatctctcaggcgtgcgcaggatatccgcaaacagatg
ctgggcatcatggacagacacaagttggatgtggtatcatgtggtaaagccacagtacgt
gtacagaaggccatctgcagtggtttcttccgaaacgcaggcaaaaaggaccctcaagaa
ggttacaggaccctcatagaccagcaggtggtctacatccacccctccagtgcgttgttc
aatcgccaaccagaatgggtggtgtaccatgagcttgtgctgaccaccaaggagtacatg
agggaggtgaccaccattgacccgagatggcttgtagaatttgcgccagctttctttaaa
gtctctgatcccacacgcctcagcaaacagaagaaacagcagcggttggagcccctctac
aaccgatacgaggaaccaaatgcttggagaatatccagagccttcagacgacgctag
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integrated database retrieval system
