Onychostoma macrolepis: 131551444
Help
Entry
131551444 CDS
T09350
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
omc
Onychostoma macrolepis
Pathway
omc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131551444 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131551444 (msh2)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131551444 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
131551444
NCBI-ProteinID:
XP_058650392
LinkDB
All DBs
Position
12:14012561..14024544
Genome browser
AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSVSEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQISYKA
SPGNLTQFEEILFGSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLQAVIKYLELLSDEANFGSFKITTFDLNHYV
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSCNLQDCYRVYQAVGQLPSLVLA
LERYSGKHQVLLHAAFISPLNDLVSDFSKYQEMIETTLDMNQIEHHEFLVKPSFDPTLSE
LRENMDRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPMPYVRPKILEKGSGRLIVKAARHPCVEAQDDVAFIPNDVTFRRG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVPSVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISRAGEEAGPEAKKRCLEKQEGEKIIEAFLAKVKSMPVEGMSDE
AVKEELRKLKAEVIGQNNNFVSEIVSRSAKVKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgtgtctgaacatggatttttg
aatttttatttttctatgcccgagaaaccggacaccaccgtgagagtatttgatcgaaac
gattactatacggtgcatggaaaagatgcggtttttgcagccaaggaggttttcaagacg
aatggagtcatcaaaaacctgggcacaggcaataagaggttggagagtgtggtcctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
gtttacaagaatgccagtaagagcagcaaagaacatgactggcaaatatcttacaaggcg
tctccaggaaacctgacccagtttgaggagattttatttggcagtggaggaggtcctggg
gagggagctgccggtgttgtcggggttcgtcttggcaccggggccgatggacagcgtgtt
gtcggtgttggctatgtagacagcaccctcaggaaactcggtgtgtgtgaattcccagac
aatgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
cttcctggaggagacgcaggtggagaccttgggaaactcaaacaggtggtgcagcgtggt
ggcattctgctcacagacaggaagaaatcagagttcacaaccaaagacattgtgcaggat
ctgaatcggctactgaaggcccgtaagggagagactgtatccagtgctgcacttccagag
atggagaaacagattgcaatgtcttgtttacaagccgtcatcaaatacctggagcttctc
tcagatgaggccaattttggttccttcaagataaccacctttgacctcaaccactacgtg
cgtctggataatgctgctgtgcaggctctgaatctcttccaggggtcttctgatgatgca
acaggcacacactctctggcaggcctcttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcaaccagtggatcaaacagcctctcatcgacaaaaacaagatagaagaaagattg
gatcttgtggagacttttgtggaagactctgagctgaggaagagttgtcaagaggatctt
ctccgccgttttccagacctgaaccgaatggcaaagaagttccagcgtcaaagctgtaat
ttacaagactgttacagggtctatcaggctgtggggcagctgccgagtctggtgctggcg
ttggagagatacagtgggaaacatcaggttctcctgcacgcagcattcatctctcccctc
aatgaccttgtctctgacttctccaaatatcaggagatgattgaaaccacactggacatg
aaccagattgaacatcatgagttcctggtgaaaccctcatttgatcccaccttgagtgag
ctcagggagaacatggatcgtttggagaaagccatgcaggcagccttaaacagtgcggct
cgtgaacttgggctggaagcagctaagactgtgaagcttgaatccaacgcacagattgga
tactttttccgagtcacatgcaaagaggaaaagagtcttcgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcagaatgccattgtcaaagag
atcatcagcatagctgcaggctatgtggatccagtacagactctgaatgaggtgatagct
cagctggatgcggtggtgagctttgctgtggtgtcccatgctgctccaatgccttacgta
aggcctaaaatactagagaaagggtcagggagactcattgtaaaggcggcaagacatccc
tgtgttgaggcccaagatgatgtggctttcattcccaatgatgtcacctttagaaggggc
gaggagatgtttcatatcataacaggtccaaatatgggtggtaaatctacatacattcgt
caagtgggtgtgattgtgctgatggcacagattggctgttttgtaccatgtgatgaggca
gagttgagtgtggtggactgtgtgctcgctcgagtgggtgcaggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggattctcttatcattattgatgaattgggcagaggcacatccacatacgatggcttt
ggtctggcctgggcaatctcagagtacattgccacccgcctcaagtctttctgcctgttt
gccactcacttccatgagttgacggcacttgcacaacaggttccctctgtccgtaacctc
cacgtcactgccctgaccacagacagcactctcacaatgctctacaaggtcaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaaacatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaagatatctccagagct
ggagaggaagctggacccgaagccaagaaacgctgcctggagaaacaggagggggagaag
atcatcgaggctttcctggctaaggttaaatcaatgcctgttgaaggcatgtctgatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcatcggacaaaacaataacttc
gtcagtgagatagtgtcacgttctgccaaagtcaaactgacttcagcctga
DBGET
integrated database retrieval system
